RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 MADDQ8WXG6 1647 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 PI4KAP2A4QPH2 592 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 SLC3A2P08195 630 aaKnown RBP8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 CCDC70Q6NSX1 233 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 PI4KAP1Q8N8J0 262 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 NEK1Q96PY6 1258 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 EID1Q9Y6B2 187 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 CASQ1P31415 396 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 LMAN1P49257 510 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 CCT2P78371 535 aaKnown RBP8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 LARP1Q6PKG0 1096 aaKnown RBP8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 NRBP1Q9UHY1 535 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 ZNF330Q9Y3S2 320 aaPredicted RBP8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 UNC13BO14795 1591 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 AOX1Q06278 1338 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 FOXO3O43524 673 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 PPFIA3O75145 1194 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 ZNF853P0CG23 659 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 CDC37L1Q7L3B6 337 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 TTC6Q86TZ1 520 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 CCDC102AQ96A19 550 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 HMG20BQ9P0W2 317 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 FAM135BQ49AJ0 1406 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 UGGT1Q9NYU2 1555 aa8.93□□□□□ -0.98
COL6A4P1-202ENST00000487147 UNC5CLQ8IV45 518 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 ANKRD20A12PQ8NF67 263 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 LEO1Q8WVC0 666 aaPredicted RBP8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 TTC41PQ6P2S7 1318 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 TTC21BQ7Z4L5 1316 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 IPO7O95373 1038 aaKnown RBP8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 SAFBQ15424 915 aaKnown RBP eCLIP8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 NFXL1Q6ZNB6 911 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 TEX2Q8IWB9 1127 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 TMX1Q9H3N1 280 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 ARFGAP3Q9NP61 516 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 PREX2Q70Z35 1606 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 GNG11P61952 73 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 TMEM87AQ8NBN3 555 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 ABCC1P33527 1531 aa8.92□□□□□ -0.98
COL6A4P1-202ENST00000487147 TUBB4AP04350 444 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 FAM193AP78312 1265 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 NCBP1Q09161 790 aaKnown RBP8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 MTHFSDQ2M296 383 aaKnown RBP8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 FBXO31Q5XUX0 539 aaPredicted RBP8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 ISM2Q6H9L7 571 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 RASSF8Q8NHQ8 419 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 TRIM34Q9BYJ4 488 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 MRVI1Q9Y6F6 885 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 IQSEC2Q5JU85 1478 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 PPFIBP1Q86W92 1011 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 NMIQ13287 307 aaPredicted RBP8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 ME3Q16798 604 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 SRRTQ9BXP5 876 aaKnown RBP8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 LRRC2Q9BYS8 371 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 U3KPZ7 1027 aaPredicted RBP8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 CFAP65Q6ZU64 1925 aaKnown RBP8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 CLGNO14967 610 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 ANXA1P04083 346 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 HMGB1P09429 215 aaKnown RBP8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 SYCP1Q15431 976 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 JAKMIP3Q5VZ66 844 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 SAMD1Q6SPF0 538 aaPredicted RBP8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 ABTB2Q8N961 1025 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 C8orf76Q96K31 380 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 IFNKQ9P0W0 207 aa8.91□□□□□ -0.98
COL6A4P1-202ENST00000487147 KIAA0232Q92628 1395 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 BTBD11A6QL63 1104 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 ATP2B1P20020 1258 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 FILIP1LQ4L180 1135 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 ZNF710Q8N1W2 664 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 CACTINQ8WUQ7 758 aaKnown RBP8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 MRPS27Q92552 414 aaKnown RBP8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 ZSWIM4Q9H7M6 989 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 NPATQ14207 1427 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 CSB-PGBD3P0DP91 1061 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 AKAP17AQ02040 695 aaKnown RBP8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 ZNF530Q6P9A1 599 aaPredicted RBP8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 LRRC8AQ8IWT6 810 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 DEF6Q9H4E7 631 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 STAP2Q9UGK3 403 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 AK9Q5TCS8 1911 aa8.9□□□□□ -0.98
COL6A4P1-202ENST00000487147 NR1I2O75469 434 aa8.9□□□□□ -0.99
COL6A4P1-202ENST00000487147 UBASH3AP57075 661 aa8.9□□□□□ -0.99
COL6A4P1-202ENST00000487147 NOC3LQ8WTT2 800 aaKnown RBP8.9□□□□□ -0.99
COL6A4P1-202ENST00000487147 SMARCE1Q969G3 411 aa8.9□□□□□ -0.99
COL6A4P1-202ENST00000487147 TM6SF1Q9BZW5 370 aa8.9□□□□□ -0.99
COL6A4P1-202ENST00000487147 HYPKQ9NX55 129 aa8.9□□□□□ -0.99
COL6A4P1-202ENST00000487147 CFAP74Q9C0B2 1584 aa8.89□□□□□ -0.99
COL6A4P1-202ENST00000487147 YTHDC2Q9H6S0 1430 aaKnown RBP8.89□□□□□ -0.99
COL6A4P1-202ENST00000487147 POLR3DP05423 398 aaPredicted RBP8.89□□□□□ -0.99
COL6A4P1-202ENST00000487147 ERCC6LQ2NKX8 1250 aa8.89□□□□□ -0.99
COL6A4P1-202ENST00000487147 Q6ZUG5 572 aa8.89□□□□□ -0.99
COL6A4P1-202ENST00000487147 TTC5Q8N0Z6 440 aa8.89□□□□□ -0.99
COL6A4P1-202ENST00000487147 DACH1Q9UI36 760 aa8.89□□□□□ -0.99
COL6A4P1-202ENST00000487147 PA2G4Q9UQ80 394 aaKnown RBP8.89□□□□□ -0.99
COL6A4P1-202ENST00000487147 ATP7AQ04656 1500 aa8.89□□□□□ -0.99
COL6A4P1-202ENST00000487147 GOLGA6L9A6NEM1 432 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms