RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 CCDC144BQ3MJ40 725 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 C4orf46Q504U0 113 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 NOM1Q5C9Z4 860 aaKnown RBP7.06□□□□□ -1.28
SF1-217ENST00000486960 CCDC146Q8IYE0 955 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 TCP11L2Q8N4U5 519 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 PRDM11Q9NQV5 511 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 GABBR1Q9UBS5 961 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 KCNG1Q9UIX4 513 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 TSKSQ9UJT2 592 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 VPS8Q8N3P4 1428 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 CLTCL1P53675 1640 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 TRPM1Q7Z4N2 1603 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 LAMA3Q16787 3333 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 EYSQ5T1H1 3165 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 GABBR2O75899 941 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 HSP90AA1P07900 732 aaKnown RBP7.05□□□□□ -1.28
SF1-217ENST00000486960 TSPY4P0CV99 314 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 TSPY10P0CW01 314 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 TMEM259Q4ZIN3 620 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 RNF187Q5TA31 235 aaPredicted RBP7.05□□□□□ -1.28
SF1-217ENST00000486960 PPARGC1BQ86YN6 1023 aaKnown RBP7.05□□□□□ -1.28
SF1-217ENST00000486960 GCC1Q96CN9 775 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 DDX27Q96GQ7 796 aaKnown RBP7.05□□□□□ -1.28
SF1-217ENST00000486960 MFRPQ9BY79 579 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 PPP1R12CQ9BZL4 782 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 GNL3LQ9NVN8 582 aaKnown RBP7.05□□□□□ -1.28
SF1-217ENST00000486960 KANK1Q14678 1352 aa7.05□□□□□ -1.28
SF1-217ENST00000486960 ANKRD33BA6NCL7 494 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 HOXA2O43364 376 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 PPP1R37O75864 691 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 TSNAXIP1Q2TAA8 658 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 AMOTL1Q8IY63 956 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 CACTIN-AS1Q8N1I8 211 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 SDR16C5Q8N3Y7 309 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 TRIM34Q9BYJ4 488 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.04□□□□□ -1.282e-6■■■■■ 412.3
SF1-217ENST00000486960 POLR3EQ9NVU0 708 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 BSDC1Q9NW68 430 aaPredicted RBP7.04□□□□□ -1.28
SF1-217ENST00000486960 RAPGEFL1Q9UHV5 662 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 PCDHB13Q9Y5F0 798 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 LY75O60449 1722 aa7.04□□□□□ -1.28
SF1-217ENST00000486960 CENPFP49454 3210 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 GNPATO15228 680 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 MAP3K13O43283 966 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 ATP2B1P20020 1258 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 RFC5P40937 340 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 C9orf131Q5VYM1 1079 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 CXorf38Q8TB03 319 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 PIK3R5Q8WYR1 880 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 KIF12Q96FN5 646 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 SCYL1Q96KG9 808 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 YTHDC1Q96MU7 727 aaKnown RBP7.03□□□□□ -1.28
SF1-217ENST00000486960 DCBLD2Q96PD2 775 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 SENP7Q9BQF6 1050 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 TIAM2Q8IVF5 1701 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 PLEKHG2Q9H7P9 1386 aa7.03□□□□□ -1.28
SF1-217ENST00000486960 TOGARAM1Q9Y4F4 1720 aa7.02□□□□□ -1.29
SF1-217ENST00000486960 ZRANB2O95218 330 aaKnown RBP eCLIP7.02□□□□□ -1.29
SF1-217ENST00000486960 LMOD1P29536 600 aaPredicted RBP7.02□□□□□ -1.29
SF1-217ENST00000486960 KCNQ4P56696 695 aa7.02□□□□□ -1.29
SF1-217ENST00000486960 MAMSTRQ6ZN01 415 aa7.02□□□□□ -1.29
SF1-217ENST00000486960 C11orf96Q7Z7L8 435 aa7.02□□□□□ -1.29
SF1-217ENST00000486960 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.02□□□□□ -1.29
SF1-217ENST00000486960 SWAP70Q9UH65 585 aa7.02□□□□□ -1.29
SF1-217ENST00000486960 PLEKHH1Q9ULM0 1364 aa7.02□□□□□ -1.29
SF1-217ENST00000486960 HTTP42858 3142 aa7.01□□□□□ -1.29
SF1-217ENST00000486960 PRUNE2Q8WUY3 3088 aa7.01□□□□□ -1.29
SF1-217ENST00000486960 C11orf95C9JLR9 678 aaPredicted RBP7.01□□□□□ -1.29
SF1-217ENST00000486960 GTF2F1P35269 517 aaKnown RBP eCLIP7.01□□□□□ -1.29
SF1-217ENST00000486960 RHBDL3P58872 404 aa7.01□□□□□ -1.29
SF1-217ENST00000486960 ZNF280DQ6N043 979 aa7.01□□□□□ -1.29
SF1-217ENST00000486960 CASC1Q6TDU7 716 aa7.01□□□□□ -1.29
SF1-217ENST00000486960 DHX38Q92620 1227 aaKnown RBP7.01□□□□□ -1.29
SF1-217ENST00000486960 ZNF622Q969S3 477 aaKnown RBP eCLIP7.01□□□□□ -1.292e-13■■□□□ 11.8
SF1-217ENST00000486960 RPS6KC1Q96S38 1066 aa7.01□□□□□ -1.29
SF1-217ENST00000486960 COL25A1Q9BXS0 654 aaPredicted RBP7.01□□□□□ -1.29
SF1-217ENST00000486960 PRKAG2Q9UGJ0 569 aa7.01□□□□□ -1.29
SF1-217ENST00000486960 FBXO9Q9UK97 447 aaPredicted RBP7.01□□□□□ -1.29
SF1-217ENST00000486960 PHF8Q9UPP1 1060 aa7.01□□□□□ -1.29
SF1-217ENST00000486960 KDM2BQ8NHM5 1336 aa7.01□□□□□ -1.29
SF1-217ENST00000486960 POTECB2RU33 542 aa7□□□□□ -1.29
SF1-217ENST00000486960 CLGNO14967 610 aa7□□□□□ -1.29
SF1-217ENST00000486960 NRDCO43847 1150 aa7□□□□□ -1.29
SF1-217ENST00000486960 GYS2P54840 703 aa7□□□□□ -1.29
SF1-217ENST00000486960 TCEAL1Q15170 157 aa7□□□□□ -1.29
SF1-217ENST00000486960 KANK4Q5T7N3 995 aaPredicted RBP7□□□□□ -1.29
SF1-217ENST00000486960 COL23A1Q86Y22 540 aaPredicted RBP7□□□□□ -1.29
SF1-217ENST00000486960 MTMR14Q8NCE2 650 aa7□□□□□ -1.29
SF1-217ENST00000486960 ARMC5Q96C12 935 aa7□□□□□ -1.29
SF1-217ENST00000486960 MS4A3Q96HJ5 214 aa7□□□□□ -1.29
SF1-217ENST00000486960 COL4A3BPQ9Y5P4 624 aa7□□□□□ -1.29
SF1-217ENST00000486960 ITSN1Q15811 1721 aa7□□□□□ -1.29
SF1-217ENST00000486960 SPATA31E1Q6ZUB1 1445 aa7□□□□□ -1.29
SF1-217ENST00000486960 COL5A2P05997 1499 aaPredicted RBP6.99□□□□□ -1.29
SF1-217ENST00000486960 PALM3A6NDB9 673 aaPredicted RBP6.99□□□□□ -1.29
SF1-217ENST00000486960 SOWAHDA6NJG2 315 aa6.99□□□□□ -1.29
SF1-217ENST00000486960 SPDYE16A6NNV3 312 aaPredicted RBP6.99□□□□□ -1.29
SF1-217ENST00000486960 GALR2O43603 387 aaPredicted RBP6.99□□□□□ -1.29
SF1-217ENST00000486960 ZNF500O60304 480 aaPredicted RBP6.99□□□□□ -1.29
SF1-217ENST00000486960 S100BP04271 92 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms