RNA–Protein interactions for RNA: ENST00000486702.1

GPC2-204, Transcript of glypican 2, humanhuman

TSL 3

Gene GPC2, Length 787 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC2-204ENST00000486702 SYNE4Q8N205 404 aa29.02■■■□□ 2.24
GPC2-204ENST00000486702 DNAJC5GQ8N7S2 189 aa29.02■■■□□ 2.24
GPC2-204ENST00000486702 ARFGEF2Q9Y6D5 1785 aa29.02■■■□□ 2.24
GPC2-204ENST00000486702 CHPF2Q9P2E5 772 aa29.01■■■□□ 2.23
GPC2-204ENST00000486702 CRY2Q49AN0 593 aa29■■■□□ 2.23
GPC2-204ENST00000486702 RTKN2Q8IZC4 609 aa29■■■□□ 2.23
GPC2-204ENST00000486702 UTP14AQ9BVJ6 771 aaKnown RBP29■■■□□ 2.23
GPC2-204ENST00000486702 DICER1Q9UPY3 1922 aaKnown RBP29■■■□□ 2.23
GPC2-204ENST00000486702 CCDC184Q52MB2 194 aa28.98■■■□□ 2.23
GPC2-204ENST00000486702 PARP10Q53GL7 1025 aa28.98■■■□□ 2.23
GPC2-204ENST00000486702 HDGFL1Q5TGJ6 251 aa28.98■■■□□ 2.23
GPC2-204ENST00000486702 RBM17Q96I25 401 aaKnown RBP28.98■■■□□ 2.23
GPC2-204ENST00000486702 DDX21Q9NR30 783 aaKnown RBP eCLIP28.98■■■□□ 2.23
GPC2-204ENST00000486702 POTEIP0CG38 1075 aa28.96■■■□□ 2.23
GPC2-204ENST00000486702 POTEJP0CG39 1038 aa28.96■■■□□ 2.23
GPC2-204ENST00000486702 NLRP3Q96P20 1036 aa28.96■■■□□ 2.23
GPC2-204ENST00000486702 MBIPQ9NS73 344 aa28.96■■■□□ 2.23
GPC2-204ENST00000486702 ELL2O00472 640 aaPredicted RBP28.95■■■□□ 2.22
GPC2-204ENST00000486702 HCLS1P14317 486 aaPredicted RBP28.95■■■□□ 2.22
GPC2-204ENST00000486702 DUSP27Q5VZP5 1158 aa28.95■■■□□ 2.22
GPC2-204ENST00000486702 CFAP44Q96MT7 982 aa28.95■■■□□ 2.22
GPC2-204ENST00000486702 ZNF541Q9H0D2 1346 aa28.94■■■□□ 2.22
GPC2-204ENST00000486702 HOXA10P31260 410 aaPredicted RBP28.94■■■□□ 2.22
GPC2-204ENST00000486702 IARSP41252 1262 aaKnown RBP28.94■■■□□ 2.22
GPC2-204ENST00000486702 NLRP10Q86W26 655 aa28.94■■■□□ 2.22
GPC2-204ENST00000486702 WDR90Q96KV7 1748 aa28.94■■■□□ 2.22
GPC2-204ENST00000486702 IBTKQ9P2D0 1353 aaPredicted RBP28.93■■■□□ 2.22
GPC2-204ENST00000486702 PPEF1O14829 653 aaPredicted RBP28.93■■■□□ 2.22
GPC2-204ENST00000486702 TCIRG1Q13488 830 aa28.93■■■□□ 2.22
GPC2-204ENST00000486702 CRAMP1Q96RY5 1269 aa28.92■■■□□ 2.22
GPC2-204ENST00000486702 TRMT112Q9UI30 125 aaKnown RBP28.92■■■□□ 2.22
GPC2-204ENST00000486702 HSP90AB3PQ58FF7 597 aa28.91■■■□□ 2.22
GPC2-204ENST00000486702 SLC10A5Q5PT55 438 aa28.91■■■□□ 2.22
GPC2-204ENST00000486702 ATP5J2-PTCD1G3V325 749 aa28.9■■■□□ 2.22
GPC2-204ENST00000486702 ANKRD13DQ6ZTN6 518 aa28.89■■■□□ 2.22
GPC2-204ENST00000486702 DBF4Q9UBU7 674 aaPredicted RBP28.89■■■□□ 2.22
GPC2-204ENST00000486702 KLRG1Q96E93 195 aa28.88■■■□□ 2.21
GPC2-204ENST00000486702 PSMD1Q99460 953 aa28.88■■■□□ 2.21
GPC2-204ENST00000486702 ZNF853P0CG23 659 aa28.87■■■□□ 2.21
GPC2-204ENST00000486702 EAPPQ56P03 285 aaPredicted RBP28.87■■■□□ 2.21
GPC2-204ENST00000486702 RTL5Q5HYW3 569 aaPredicted RBP28.87■■■□□ 2.21
GPC2-204ENST00000486702 PLBD2Q8NHP8 589 aa28.87■■■□□ 2.21
GPC2-204ENST00000486702 JDP2Q8WYK2 163 aa28.87■■■□□ 2.21
GPC2-204ENST00000486702 RIC1Q4ADV7 1423 aa28.86■■■□□ 2.21
GPC2-204ENST00000486702 CC2D2BQ6DHV5 1058 aa28.86■■■□□ 2.21
GPC2-204ENST00000486702 CHADLQ6NUI6 762 aa28.86■■■□□ 2.21
GPC2-204ENST00000486702 TAF1DQ9H5J8 278 aaPredicted RBP28.86■■■□□ 2.21
GPC2-204ENST00000486702 GJA3Q9Y6H8 435 aa28.86■■■□□ 2.21
GPC2-204ENST00000486702 ABCC4O15439 1325 aa28.86■■■□□ 2.21
GPC2-204ENST00000486702 FZD9O00144 591 aa28.85■■■□□ 2.21
GPC2-204ENST00000486702 HOXB7P09629 217 aa28.85■■■□□ 2.21
GPC2-204ENST00000486702 GNAI1P63096 354 aa28.85■■■□□ 2.21
GPC2-204ENST00000486702 LARGE2Q8N3Y3 721 aa28.85■■■□□ 2.21
GPC2-204ENST00000486702 SNED1Q8TER0 1413 aa28.85■■■□□ 2.21
GPC2-204ENST00000486702 IQCA1LA6NCM1 817 aa28.84■■■□□ 2.21
GPC2-204ENST00000486702 C8orf58Q8NAV2 365 aa28.84■■■□□ 2.21
GPC2-204ENST00000486702 FAM89AQ96GI7 184 aa28.84■■■□□ 2.21
GPC2-204ENST00000486702 PHAXQ9H814 394 aaKnown RBP28.84■■■□□ 2.21
GPC2-204ENST00000486702 IFT57Q9NWB7 429 aa28.84■■■□□ 2.21
GPC2-204ENST00000486702 HYPKQ9NX55 129 aa28.84■■■□□ 2.21
GPC2-204ENST00000486702 CLEC11AQ9Y240 323 aa28.84■■■□□ 2.21
GPC2-204ENST00000486702 SH3TC1Q8TE82 1336 aa28.84■■■□□ 2.21
GPC2-204ENST00000486702 L3MBTL3Q96JM7 780 aaPredicted RBP28.83■■■□□ 2.21
GPC2-204ENST00000486702 TMX4Q9H1E5 349 aaPredicted RBP28.83■■■□□ 2.21
GPC2-204ENST00000486702 RNF123Q5XPI4 1314 aa28.83■■■□□ 2.21
GPC2-204ENST00000486702 HACL1Q9UJ83 578 aa28.82■■■□□ 2.2
GPC2-204ENST00000486702 ATP6V0A2Q9Y487 856 aa28.82■■■□□ 2.2
GPC2-204ENST00000486702 COL4A5P29400 1685 aa28.82■■■□□ 2.2
GPC2-204ENST00000486702 ANKRD36CQ5JPF3 1778 aa28.82■■■□□ 2.2
GPC2-204ENST00000486702 EIF6P56537 245 aaKnown RBP28.81■■■□□ 2.2
GPC2-204ENST00000486702 AOC3Q16853 763 aa28.81■■■□□ 2.2
GPC2-204ENST00000486702 DDX46Q7L014 1031 aaKnown RBP28.81■■■□□ 2.2
GPC2-204ENST00000486702 CALD1Q05682 793 aaKnown RBP28.8■■■□□ 2.2
GPC2-204ENST00000486702 RIC3Q7Z5B4 369 aa28.8■■■□□ 2.2
GPC2-204ENST00000486702 ISCA1Q9BUE6 129 aa28.8■■■□□ 2.2
GPC2-204ENST00000486702 PPIP5K2O43314 1243 aa28.79■■■□□ 2.2
GPC2-204ENST00000486702 EPHX2P34913 555 aa28.79■■■□□ 2.2
GPC2-204ENST00000486702 ZEB1P37275 1124 aaPredicted RBP28.79■■■□□ 2.2
GPC2-204ENST00000486702 TSR2Q969E8 191 aaKnown RBP28.78■■■□□ 2.2
GPC2-204ENST00000486702 BBOX1O75936 387 aa28.77■■■□□ 2.2
GPC2-204ENST00000486702 LDHDQ86WU2 507 aa28.77■■■□□ 2.2
GPC2-204ENST00000486702 NIM1KQ8IY84 436 aa28.77■■■□□ 2.2
GPC2-204ENST00000486702 GPC2Q8N158 579 aa28.77■■■□□ 2.2
GPC2-204ENST00000486702 TSPYL6Q8N831 410 aa28.77■■■□□ 2.2
GPC2-204ENST00000486702 JARID2Q92833 1246 aaPredicted RBP28.77■■■□□ 2.2
GPC2-204ENST00000486702 LAMB2P55268 1798 aa28.77■■■□□ 2.2
GPC2-204ENST00000486702 TAF1P21675 1872 aa28.76■■■□□ 2.2
GPC2-204ENST00000486702 GRIPAP1Q4V328 841 aa28.76■■■□□ 2.19
GPC2-204ENST00000486702 DPP8Q6V1X1 898 aaPredicted RBP28.76■■■□□ 2.19
GPC2-204ENST00000486702 SP8Q8IXZ3 490 aa28.76■■■□□ 2.19
GPC2-204ENST00000486702 SALL2Q9Y467 1007 aaPredicted RBP28.76■■■□□ 2.19
GPC2-204ENST00000486702 ZNF316A6NFI3 1004 aaPredicted RBP28.75■■■□□ 2.19
GPC2-204ENST00000486702 GOLGA2Q08379 1002 aa28.75■■■□□ 2.19
GPC2-204ENST00000486702 GRAPQ13588 217 aa28.75■■■□□ 2.19
GPC2-204ENST00000486702 MPNDQ8N594 471 aa28.75■■■□□ 2.19
GPC2-204ENST00000486702 GRAPLQ8TC17 118 aaPredicted RBP28.75■■■□□ 2.19
GPC2-204ENST00000486702 MYD88Q99836 296 aa28.75■■■□□ 2.19
GPC2-204ENST00000486702 JMYQ8N9B5 988 aa28.74■■■□□ 2.19
GPC2-204ENST00000486702 MRS2Q9HD23 443 aa28.74■■■□□ 2.19
GPC2-204ENST00000486702 MAP1SQ66K74 1059 aaPredicted RBP28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms