RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 MASTLQ96GX5 879 aa25.42■■□□□ 1.66
LIMK1-206ENST00000486361 MYD88Q99836 296 aa25.42■■□□□ 1.66
LIMK1-206ENST00000486361 KLRG2A4D1S0 409 aaPredicted RBP25.41■■□□□ 1.66
LIMK1-206ENST00000486361 TRMT112Q9UI30 125 aaKnown RBP25.41■■□□□ 1.66
LIMK1-206ENST00000486361 DDX58O95786 925 aaKnown RBP25.4■■□□□ 1.66
LIMK1-206ENST00000486361 STYK1Q6J9G0 422 aa25.4■■□□□ 1.66
LIMK1-206ENST00000486361 C3orf67Q6ZVT6 689 aa25.4■■□□□ 1.66
LIMK1-206ENST00000486361 MAP3K2Q9Y2U5 619 aa25.4■■□□□ 1.66
LIMK1-206ENST00000486361 IBTKQ9P2D0 1353 aaPredicted RBP25.4■■□□□ 1.66
LIMK1-206ENST00000486361 COL11A2P13942 1736 aaPredicted RBP25.4■■□□□ 1.66
LIMK1-206ENST00000486361 PI4KAP2A4QPH2 592 aa25.39■■□□□ 1.66
LIMK1-206ENST00000486361 KSR2Q6VAB6 950 aa25.39■■□□□ 1.66
LIMK1-206ENST00000486361 PI4KAP1Q8N8J0 262 aa25.39■■□□□ 1.66
LIMK1-206ENST00000486361 HCLS1P14317 486 aaPredicted RBP25.38■■□□□ 1.65
LIMK1-206ENST00000486361 NPR1P16066 1061 aa25.38■■□□□ 1.65
LIMK1-206ENST00000486361 RTL5Q5HYW3 569 aaPredicted RBP25.38■■□□□ 1.65
LIMK1-206ENST00000486361 CNKSR1Q969H4 720 aa25.38■■□□□ 1.65
LIMK1-206ENST00000486361 ANKRD36CQ5JPF3 1778 aa25.37■■□□□ 1.65
LIMK1-206ENST00000486361 DLEC1Q9Y238 1755 aa25.37■■□□□ 1.65
LIMK1-206ENST00000486361 C21orf2O43822 256 aa25.37■■□□□ 1.65
LIMK1-206ENST00000486361 FLIIQ13045 1269 aa25.37■■□□□ 1.65
LIMK1-206ENST00000486361 SLC10A5Q5PT55 438 aa25.37■■□□□ 1.65
LIMK1-206ENST00000486361 FAM89AQ96GI7 184 aa25.37■■□□□ 1.65
LIMK1-206ENST00000486361 METTL22Q9BUU2 404 aaPredicted RBP25.37■■□□□ 1.65
LIMK1-206ENST00000486361 CHD4Q14839 1912 aa25.37■■□□□ 1.65
LIMK1-206ENST00000486361 TNRC6CQ9HCJ0 1690 aaKnown RBP25.36■■□□□ 1.65
LIMK1-206ENST00000486361 ADCY9O60503 1353 aa25.36■■□□□ 1.65
LIMK1-206ENST00000486361 ARFGEF2Q9Y6D5 1785 aa25.36■■□□□ 1.65
LIMK1-206ENST00000486361 HNRNPUQ00839 825 aaKnown RBP eCLIP25.35■■□□□ 1.65
LIMK1-206ENST00000486361 TRIM28Q13263 835 aaKnown RBP25.35■■□□□ 1.65
LIMK1-206ENST00000486361 PRPF40BQ6NWY9 871 aaKnown RBP25.35■■□□□ 1.65
LIMK1-206ENST00000486361 TRMT2AQ8IZ69 625 aaKnown RBP25.35■■□□□ 1.65
LIMK1-206ENST00000486361 JARID2Q92833 1246 aaPredicted RBP25.35■■□□□ 1.65
LIMK1-206ENST00000486361 SH3TC1Q8TE82 1336 aa25.35■■□□□ 1.65
LIMK1-206ENST00000486361 FKBP5Q13451 457 aaPredicted RBP25.34■■□□□ 1.65
LIMK1-206ENST00000486361 CRY2Q49AN0 593 aa25.34■■□□□ 1.65
LIMK1-206ENST00000486361 NLRP3Q96P20 1036 aa25.34■■□□□ 1.65
LIMK1-206ENST00000486361 ARFGEF1Q9Y6D6 1849 aa25.34■■□□□ 1.65
LIMK1-206ENST00000486361 RASSF7Q02833 373 aa25.33■■□□□ 1.65
LIMK1-206ENST00000486361 RPGRQ92834 1020 aaKnown RBP25.33■■□□□ 1.65
LIMK1-206ENST00000486361 OLFM4Q6UX06 510 aa25.32■■□□□ 1.64
LIMK1-206ENST00000486361 SLX4Q8IY92 1834 aa25.32■■□□□ 1.64
LIMK1-206ENST00000486361 IGKV5-2P06315 115 aa25.31■■□□□ 1.64
LIMK1-206ENST00000486361 RNF123Q5XPI4 1314 aa25.31■■□□□ 1.64
LIMK1-206ENST00000486361 RIC1Q4ADV7 1423 aa25.3■■□□□ 1.64
LIMK1-206ENST00000486361 F6X3S4 739 aa25.3■■□□□ 1.64
LIMK1-206ENST00000486361 ALDH1B1P30837 517 aa25.3■■□□□ 1.64
LIMK1-206ENST00000486361 CWF19L2Q2TBE0 894 aaKnown RBP25.3■■□□□ 1.64
LIMK1-206ENST00000486361 CCDC191Q8NCU4 936 aa25.3■■□□□ 1.64
LIMK1-206ENST00000486361 CWC25Q9NXE8 425 aaPredicted RBP25.3■■□□□ 1.64
LIMK1-206ENST00000486361 HOXA10P31260 410 aaPredicted RBP25.29■■□□□ 1.64
LIMK1-206ENST00000486361 C9orf131Q5VYM1 1079 aa25.29■■□□□ 1.64
LIMK1-206ENST00000486361 ZNF784Q8NCA9 323 aaPredicted RBP25.29■■□□□ 1.64
LIMK1-206ENST00000486361 C7orf43Q8WVR3 580 aa25.29■■□□□ 1.64
LIMK1-206ENST00000486361 RBM17Q96I25 401 aaKnown RBP25.29■■□□□ 1.64
LIMK1-206ENST00000486361 NFKBIEO00221 500 aa25.28■■□□□ 1.64
LIMK1-206ENST00000486361 IRS4O14654 1257 aaPredicted RBP25.28■■□□□ 1.64
LIMK1-206ENST00000486361 NEXNQ0ZGT2 675 aa25.28■■□□□ 1.64
LIMK1-206ENST00000486361 SLC51AQ86UW1 340 aa25.28■■□□□ 1.64
LIMK1-206ENST00000486361 ZBTB38Q8NAP3 1195 aaPredicted RBP25.28■■□□□ 1.64
LIMK1-206ENST00000486361 DNAAF4Q8WXU2 420 aa25.28■■□□□ 1.64
LIMK1-206ENST00000486361 CACNA1SQ13698 1873 aa25.28■■□□□ 1.64
LIMK1-206ENST00000486361 PRELPP51888 382 aa25.27■■□□□ 1.64
LIMK1-206ENST00000486361 MRPL50Q8N5N7 158 aaKnown RBP25.27■■□□□ 1.64
LIMK1-206ENST00000486361 SSH1Q8WYL5 1049 aa25.27■■□□□ 1.64
LIMK1-206ENST00000486361 BCL2L13Q9BXK5 485 aa25.27■■□□□ 1.64
LIMK1-206ENST00000486361 CRAMP1Q96RY5 1269 aa25.26■■□□□ 1.63
LIMK1-206ENST00000486361 NEURL1BA8MQ27 555 aa25.25■■□□□ 1.63
LIMK1-206ENST00000486361 PCCAP05165 728 aaPredicted RBP25.25■■□□□ 1.63
LIMK1-206ENST00000486361 RNF181Q9P0P0 153 aa25.25■■□□□ 1.63
LIMK1-206ENST00000486361 ABCC4O15439 1325 aa25.23■■□□□ 1.63
LIMK1-206ENST00000486361 ZNF526Q8TF50 670 aaPredicted RBP25.23■■□□□ 1.63
LIMK1-206ENST00000486361 CCDC93Q567U6 631 aa25.22■■□□□ 1.63
LIMK1-206ENST00000486361 DDX46Q7L014 1031 aaKnown RBP25.22■■□□□ 1.63
LIMK1-206ENST00000486361 CACNA1FO60840 1977 aa25.22■■□□□ 1.63
LIMK1-206ENST00000486361 PPEF1O14829 653 aaPredicted RBP25.21■■□□□ 1.63
LIMK1-206ENST00000486361 SF3B3Q15393 1217 aaKnown RBP25.21■■□□□ 1.63
LIMK1-206ENST00000486361 SOGA3Q5TF21 947 aa25.21■■□□□ 1.63
LIMK1-206ENST00000486361 LAMB2P55268 1798 aa25.21■■□□□ 1.63
LIMK1-206ENST00000486361 DDX60Q8IY21 1712 aaKnown RBP25.2■■□□□ 1.63
LIMK1-206ENST00000486361 LMNB1P20700 586 aa25.2■■□□□ 1.62
LIMK1-206ENST00000486361 GCKRQ14397 625 aa25.2■■□□□ 1.62
LIMK1-206ENST00000486361 BEND3Q5T5X7 828 aa25.2■■□□□ 1.62
LIMK1-206ENST00000486361 SLC4A10Q6U841 1118 aa25.2■■□□□ 1.62
LIMK1-206ENST00000486361 LINS1Q8NG48 757 aa25.2■■□□□ 1.62
LIMK1-206ENST00000486361 CCDC85AQ96PX6 553 aaPredicted RBP25.2■■□□□ 1.62
LIMK1-206ENST00000486361 TAOK3Q9H2K8 898 aa25.2■■□□□ 1.62
LIMK1-206ENST00000486361 UBE3BQ7Z3V4 1068 aa25.19■■□□□ 1.62
LIMK1-206ENST00000486361 SMC4Q9NTJ3 1288 aa25.19■■□□□ 1.62
LIMK1-206ENST00000486361 H7C1W4 665 aa25.18■■□□□ 1.62
LIMK1-206ENST00000486361 PDE8AO60658 829 aa25.18■■□□□ 1.62
LIMK1-206ENST00000486361 ALDH1L2Q3SY69 923 aa25.18■■□□□ 1.62
LIMK1-206ENST00000486361 GRAPQ13588 217 aa25.17■■□□□ 1.62
LIMK1-206ENST00000486361 RTKN2Q8IZC4 609 aa25.17■■□□□ 1.62
LIMK1-206ENST00000486361 GRAPLQ8TC17 118 aaPredicted RBP25.17■■□□□ 1.62
LIMK1-206ENST00000486361 CELF1Q92879 486 aaKnown RBP25.17■■□□□ 1.62
LIMK1-206ENST00000486361 SBF1O95248 1867 aa25.17■■□□□ 1.62
LIMK1-206ENST00000486361 CDHR2Q9BYE9 1310 aa25.16■■□□□ 1.62
LIMK1-206ENST00000486361 BBOX1O75936 387 aa25.16■■□□□ 1.62
LIMK1-206ENST00000486361 FER1L6Q2WGJ9 1857 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms