RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 KLRG1Q96E93 195 aa29.32■■■□□ 2.28
SREBF1-214ENST00000486311 SNED1Q8TER0 1413 aa29.3■■■□□ 2.28
SREBF1-214ENST00000486311 CC2D2BQ6DHV5 1058 aa29.3■■■□□ 2.28
SREBF1-214ENST00000486311 KRT24Q2M2I5 525 aa29.29■■■□□ 2.28
SREBF1-214ENST00000486311 COPS6Q7L5N1 327 aa29.29■■■□□ 2.28
SREBF1-214ENST00000486311 SYNE4Q8N205 404 aa29.29■■■□□ 2.28
SREBF1-214ENST00000486311 NECTIN2Q92692 538 aa29.29■■■□□ 2.28
SREBF1-214ENST00000486311 L3MBTL3Q96JM7 780 aaPredicted RBP29.29■■■□□ 2.28
SREBF1-214ENST00000486311 PSMD1Q99460 953 aa29.29■■■□□ 2.28
SREBF1-214ENST00000486311 DDX21Q9NR30 783 aaKnown RBP eCLIP29.29■■■□□ 2.28
SREBF1-214ENST00000486311 IARSP41252 1262 aaKnown RBP29.28■■■□□ 2.28
SREBF1-214ENST00000486311 XAGE3Q8WTP9 111 aa29.28■■■□□ 2.28
SREBF1-214ENST00000486311 RBM17Q96I25 401 aaKnown RBP29.28■■■□□ 2.28
SREBF1-214ENST00000486311 CRAMP1Q96RY5 1269 aa29.28■■■□□ 2.28
SREBF1-214ENST00000486311 UTP14AQ9BVJ6 771 aaKnown RBP29.28■■■□□ 2.28
SREBF1-214ENST00000486311 LAS1LQ9Y4W2 734 aaKnown RBP29.28■■■□□ 2.28
SREBF1-214ENST00000486311 HSP90AB3PQ58FF7 597 aa29.27■■■□□ 2.28
SREBF1-214ENST00000486311 SLC10A5Q5PT55 438 aa29.27■■■□□ 2.28
SREBF1-214ENST00000486311 C3orf67Q6ZVT6 689 aa29.27■■■□□ 2.28
SREBF1-214ENST00000486311 IQCA1LA6NCM1 817 aa29.26■■■□□ 2.27
SREBF1-214ENST00000486311 JMYQ8N9B5 988 aa29.26■■■□□ 2.27
SREBF1-214ENST00000486311 RNF123Q5XPI4 1314 aa29.25■■■□□ 2.27
SREBF1-214ENST00000486311 ZNF541Q9H0D2 1346 aa29.25■■■□□ 2.27
SREBF1-214ENST00000486311 HOXB7P09629 217 aa29.25■■■□□ 2.27
SREBF1-214ENST00000486311 AIMP1Q12904 312 aaKnown RBP29.25■■■□□ 2.27
SREBF1-214ENST00000486311 GRIPAP1Q4V328 841 aa29.25■■■□□ 2.27
SREBF1-214ENST00000486311 NLRP3Q96P20 1036 aa29.25■■■□□ 2.27
SREBF1-214ENST00000486311 FZD9O00144 591 aa29.24■■■□□ 2.27
SREBF1-214ENST00000486311 CHADLQ6NUI6 762 aa29.24■■■□□ 2.27
SREBF1-214ENST00000486311 CFAP44Q96MT7 982 aa29.24■■■□□ 2.27
SREBF1-214ENST00000486311 PPEF1O14829 653 aaPredicted RBP29.22■■■□□ 2.27
SREBF1-214ENST00000486311 POTEIP0CG38 1075 aa29.22■■■□□ 2.27
SREBF1-214ENST00000486311 POTEJP0CG39 1038 aa29.22■■■□□ 2.27
SREBF1-214ENST00000486311 TCIRG1Q13488 830 aa29.22■■■□□ 2.27
SREBF1-214ENST00000486311 HDGFL1Q5TGJ6 251 aa29.22■■■□□ 2.27
SREBF1-214ENST00000486311 NLRP10Q86W26 655 aa29.22■■■□□ 2.27
SREBF1-214ENST00000486311 TAF1DQ9H5J8 278 aaPredicted RBP29.22■■■□□ 2.27
SREBF1-214ENST00000486311 CHPF2Q9P2E5 772 aa29.22■■■□□ 2.27
SREBF1-214ENST00000486311 JDP2Q8WYK2 163 aa29.19■■■□□ 2.26
SREBF1-214ENST00000486311 SLC51AQ86UW1 340 aa29.18■■■□□ 2.26
SREBF1-214ENST00000486311 LDHDQ86WU2 507 aa29.18■■■□□ 2.26
SREBF1-214ENST00000486311 MBIPQ9NS73 344 aa29.18■■■□□ 2.26
SREBF1-214ENST00000486311 DBF4Q9UBU7 674 aaPredicted RBP29.18■■■□□ 2.26
SREBF1-214ENST00000486311 APAF1O14727 1248 aa29.17■■■□□ 2.26
SREBF1-214ENST00000486311 TCERG1O14776 1098 aaKnown RBP29.17■■■□□ 2.26
SREBF1-214ENST00000486311 ZNF853P0CG23 659 aa29.17■■■□□ 2.26
SREBF1-214ENST00000486311 HACL1Q9UJ83 578 aa29.17■■■□□ 2.26
SREBF1-214ENST00000486311 ZEB1P37275 1124 aaPredicted RBP29.16■■■□□ 2.26
SREBF1-214ENST00000486311 DUSP27Q5VZP5 1158 aa29.16■■■□□ 2.26
SREBF1-214ENST00000486311 GPC2Q8N158 579 aa29.16■■■□□ 2.26
SREBF1-214ENST00000486311 PLBD2Q8NHP8 589 aa29.16■■■□□ 2.26
SREBF1-214ENST00000486311 TRMT112Q9UI30 125 aaKnown RBP29.16■■■□□ 2.26
SREBF1-214ENST00000486311 ATP6V0A2Q9Y487 856 aa29.16■■■□□ 2.26
SREBF1-214ENST00000486311 ABCC4O15439 1325 aa29.16■■■□□ 2.26
SREBF1-214ENST00000486311 SH3TC1Q8TE82 1336 aa29.16■■■□□ 2.26
SREBF1-214ENST00000486311 HCLS1P14317 486 aaPredicted RBP29.15■■■□□ 2.26
SREBF1-214ENST00000486311 ANKRD13DQ6ZTN6 518 aa29.14■■■□□ 2.26
SREBF1-214ENST00000486311 TMX4Q9H1E5 349 aaPredicted RBP29.14■■■□□ 2.26
SREBF1-214ENST00000486311 IFT57Q9NWB7 429 aa29.14■■■□□ 2.26
SREBF1-214ENST00000486311 COL4A5P29400 1685 aa29.13■■■□□ 2.25
SREBF1-214ENST00000486311 EPHX2P34913 555 aa29.13■■■□□ 2.25
SREBF1-214ENST00000486311 EIF6P56537 245 aaKnown RBP29.13■■■□□ 2.25
SREBF1-214ENST00000486311 CALD1Q05682 793 aaKnown RBP29.13■■■□□ 2.25
SREBF1-214ENST00000486311 LARGE2Q8N3Y3 721 aa29.13■■■□□ 2.25
SREBF1-214ENST00000486311 HYPKQ9NX55 129 aa29.13■■■□□ 2.25
SREBF1-214ENST00000486311 SCN4AP35499 1836 aa29.13■■■□□ 2.25
SREBF1-214ENST00000486311 PCNTO95613 3336 aa29.12■■■□□ 2.25
SREBF1-214ENST00000486311 BBOX1O75936 387 aa29.12■■■□□ 2.25
SREBF1-214ENST00000486311 ISCA1Q9BUE6 129 aa29.12■■■□□ 2.25
SREBF1-214ENST00000486311 GNAI1P63096 354 aa29.11■■■□□ 2.25
SREBF1-214ENST00000486311 EAPPQ56P03 285 aaPredicted RBP29.11■■■□□ 2.25
SREBF1-214ENST00000486311 CREBZFQ9NS37 354 aa29.11■■■□□ 2.25
SREBF1-214ENST00000486311 PNMA8AQ86V59 439 aaPredicted RBP29.1■■■□□ 2.25
SREBF1-214ENST00000486311 VPS33BQ9H267 617 aa29.1■■■□□ 2.25
SREBF1-214ENST00000486311 PASKQ96RG2 1323 aa29.1■■■□□ 2.25
SREBF1-214ENST00000486311 ANKRD36CQ5JPF3 1778 aa29.1■■■□□ 2.25
SREBF1-214ENST00000486311 DDX46Q7L014 1031 aaKnown RBP29.09■■■□□ 2.25
SREBF1-214ENST00000486311 SP8Q8IXZ3 490 aa29.09■■■□□ 2.25
SREBF1-214ENST00000486311 RTFDC1Q9BY42 306 aaPredicted RBP29.09■■■□□ 2.25
SREBF1-214ENST00000486311 PPIP5K2O43314 1243 aa29.08■■■□□ 2.25
SREBF1-214ENST00000486311 GRAPQ13588 217 aa29.08■■■□□ 2.25
SREBF1-214ENST00000486311 COL13A1Q5TAT6 717 aaPredicted RBP29.08■■■□□ 2.25
SREBF1-214ENST00000486311 NIM1KQ8IY84 436 aa29.08■■■□□ 2.25
SREBF1-214ENST00000486311 GRAPLQ8TC17 118 aaPredicted RBP29.08■■■□□ 2.25
SREBF1-214ENST00000486311 GJA3Q9Y6H8 435 aa29.08■■■□□ 2.25
SREBF1-214ENST00000486311 ITGBL1O95965 494 aaPredicted RBP29.07■■■□□ 2.24
SREBF1-214ENST00000486311 SUPT20HQ8NEM7 779 aa29.07■■■□□ 2.24
SREBF1-214ENST00000486311 CLEC11AQ9Y240 323 aa29.07■■■□□ 2.24
SREBF1-214ENST00000486311 ATP5J2-PTCD1G3V325 749 aa29.06■■■□□ 2.24
SREBF1-214ENST00000486311 TRIM28Q13263 835 aaKnown RBP29.06■■■□□ 2.24
SREBF1-214ENST00000486311 AOC3Q16853 763 aa29.05■■■□□ 2.24
SREBF1-214ENST00000486311 DPP8Q6V1X1 898 aaPredicted RBP29.05■■■□□ 2.24
SREBF1-214ENST00000486311 ZNF428Q96B54 188 aa29.05■■■□□ 2.24
SREBF1-214ENST00000486311 MPNDQ8N594 471 aa29.04■■■□□ 2.24
SREBF1-214ENST00000486311 FAM89AQ96GI7 184 aa29.04■■■□□ 2.24
SREBF1-214ENST00000486311 ELL2O00472 640 aaPredicted RBP29.03■■■□□ 2.24
SREBF1-214ENST00000486311 LMOD1P29536 600 aaPredicted RBP29.03■■■□□ 2.24
SREBF1-214ENST00000486311 SCNN1DP51172 638 aa29.03■■■□□ 2.24
SREBF1-214ENST00000486311 SF3B3Q15393 1217 aaKnown RBP29.03■■■□□ 2.24
SREBF1-214ENST00000486311 TMC4Q7Z404 712 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms