RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 CALD1Q05682 793 aaKnown RBP9.15□□□□□ -0.94
VPS50-218ENST00000485994 NEUROD2Q15784 382 aa9.15□□□□□ -0.94
VPS50-218ENST00000485994 CCDC27Q2M243 656 aa9.15□□□□□ -0.94
VPS50-218ENST00000485994 GIGYF2Q6Y7W6 1299 aaKnown RBP9.15□□□□□ -0.94
VPS50-218ENST00000485994 BICDL1Q6ZP65 573 aa9.15□□□□□ -0.94
VPS50-218ENST00000485994 TTLL6Q8N841 843 aa9.15□□□□□ -0.94
VPS50-218ENST00000485994 ZNF330Q9Y3S2 320 aaPredicted RBP9.15□□□□□ -0.94
VPS50-218ENST00000485994 LAMB4A4D0S4 1761 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 BCORQ6W2J9 1755 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 SCN7AQ01118 1682 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 POTEB3A0JP26 581 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 APAF1O14727 1248 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 ANP32CO43423 234 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 CHRNA5P30532 468 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 PIP4K2AP48426 406 aaPredicted RBP9.14□□□□□ -0.95
VPS50-218ENST00000485994 HLFQ16534 295 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 POTEBQ6S5H4 581 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 ARHGAP27Q6ZUM4 889 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 CHMP4AQ9BY43 222 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 RRP7AQ9Y3A4 280 aaKnown RBP9.14□□□□□ -0.95
VPS50-218ENST00000485994 SBF1O95248 1867 aa9.14□□□□□ -0.95
VPS50-218ENST00000485994 SRGNP10124 158 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 GNAI1P63096 354 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 ST5P78524 1137 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 STYK1Q6J9G0 422 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 NBPF5PQ86XG9 351 aaPredicted RBP9.13□□□□□ -0.95
VPS50-218ENST00000485994 C2CD5Q86YS7 1000 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 ZNF34Q8IZ26 560 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 CNBD1Q8NA66 436 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 CNKSR1Q969H4 720 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 MASTLQ96GX5 879 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 NYXQ9GZU5 481 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 DDX21Q9NR30 783 aaKnown RBP eCLIP9.13□□□□□ -0.95
VPS50-218ENST00000485994 IFT57Q9NWB7 429 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 NIP7Q9Y221 180 aaKnown RBP eCLIP9.13□□□□□ -0.95
VPS50-218ENST00000485994 DLEC1Q9Y238 1755 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 ANKRD31Q8N7Z5 1873 aa9.13□□□□□ -0.95
VPS50-218ENST00000485994 EIF2S2P20042 333 aaKnown RBP9.12□□□□□ -0.95
VPS50-218ENST00000485994 CCDC184Q52MB2 194 aa9.12□□□□□ -0.95
VPS50-218ENST00000485994 PARP10Q53GL7 1025 aa9.12□□□□□ -0.95
VPS50-218ENST00000485994 TTLL7Q6ZT98 887 aa9.12□□□□□ -0.95
VPS50-218ENST00000485994 NGEFQ8N5V2 710 aa9.12□□□□□ -0.95
VPS50-218ENST00000485994 FAM212AQ96EL1 285 aa9.12□□□□□ -0.95
VPS50-218ENST00000485994 OCEL1Q9H607 264 aa9.12□□□□□ -0.95
VPS50-218ENST00000485994 ATP10DQ9P241 1426 aa9.12□□□□□ -0.95
VPS50-218ENST00000485994 IBTKQ9P2D0 1353 aaPredicted RBP9.12□□□□□ -0.95
VPS50-218ENST00000485994 ZC3H4Q9UPT8 1303 aaKnown RBP9.11□□□□□ -0.95
VPS50-218ENST00000485994 MYL6BP14649 208 aa9.11□□□□□ -0.95
VPS50-218ENST00000485994 ALDH1B1P30837 517 aa9.11□□□□□ -0.95
VPS50-218ENST00000485994 SLC10A5Q5PT55 438 aa9.11□□□□□ -0.95
VPS50-218ENST00000485994 SOGA3Q5TF21 947 aa9.11□□□□□ -0.95
VPS50-218ENST00000485994 KIF6Q6ZMV9 814 aa9.11□□□□□ -0.95
VPS50-218ENST00000485994 C7orf43Q8WVR3 580 aa9.11□□□□□ -0.95
VPS50-218ENST00000485994 MBIPQ9NS73 344 aa9.11□□□□□ -0.95
VPS50-218ENST00000485994 WWC3Q9ULE0 1092 aa9.11□□□□□ -0.95
VPS50-218ENST00000485994 IL16Q14005 1332 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 RNF123Q5XPI4 1314 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 LTBP3Q9NS15 1303 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 NPR1P16066 1061 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 HOXA10P31260 410 aaPredicted RBP9.1□□□□□ -0.95
VPS50-218ENST00000485994 C1QTNF8P60827 252 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 CRY2Q49AN0 593 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 HSP90AB3PQ58FF7 597 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 C9orf131Q5VYM1 1079 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 COPS6Q7L5N1 327 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 PPP1R42Q7Z4L9 355 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 ZNF622Q969S3 477 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS50-218ENST00000485994 GPBP1L1Q9HC44 474 aaPredicted RBP9.1□□□□□ -0.95
VPS50-218ENST00000485994 HYPKQ9NX55 129 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 DBF4Q9UBU7 674 aaPredicted RBP9.1□□□□□ -0.95
VPS50-218ENST00000485994 RIC1Q4ADV7 1423 aa9.1□□□□□ -0.95
VPS50-218ENST00000485994 NPHP1O15259 732 aa9.09□□□□□ -0.95
VPS50-218ENST00000485994 LMNB1P20700 586 aa9.09□□□□□ -0.95
VPS50-218ENST00000485994 TRIM28Q13263 835 aaKnown RBP9.09□□□□□ -0.95
VPS50-218ENST00000485994 TCIRG1Q13488 830 aa9.09□□□□□ -0.95
VPS50-218ENST00000485994 PROSER3Q2NL68 480 aa9.09□□□□□ -0.95
VPS50-218ENST00000485994 SUSD4Q5VX71 490 aa9.09□□□□□ -0.95
VPS50-218ENST00000485994 DUSP27Q5VZP5 1158 aa9.09□□□□□ -0.95
VPS50-218ENST00000485994 WDR63Q8IWG1 891 aa9.09□□□□□ -0.95
VPS50-218ENST00000485994 WWC1Q8IX03 1113 aa9.09□□□□□ -0.95
VPS50-218ENST00000485994 MRS2Q9HD23 443 aa9.09□□□□□ -0.95
VPS50-218ENST00000485994 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.09□□□□□ -0.95
VPS50-218ENST00000485994 LAS1LQ9Y4W2 734 aaKnown RBP9.09□□□□□ -0.95
VPS50-218ENST00000485994 SLX4Q8IY92 1834 aa9.09□□□□□ -0.95
VPS50-218ENST00000485994 FER1L6Q2WGJ9 1857 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 CCDC88AQ3V6T2 1871 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 UBN2Q6ZU65 1347 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 CACNA1FO60840 1977 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 DICER1Q9UPY3 1922 aaKnown RBP9.08□□□□□ -0.96
VPS50-218ENST00000485994 GTF2E1P29083 439 aaPredicted RBP9.08□□□□□ -0.96
VPS50-218ENST00000485994 KRT24Q2M2I5 525 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 GRIPAP1Q4V328 841 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 DCAF8Q5TAQ9 597 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 HDGFL1Q5TGJ6 251 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 CC2D2BQ6DHV5 1058 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 ANKRD13DQ6ZTN6 518 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 PLBD2Q8NHP8 589 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 XAGE3Q8WTP9 111 aa9.08□□□□□ -0.96
VPS50-218ENST00000485994 TMEM121BQ9BXQ6 578 aaPredicted RBP9.08□□□□□ -0.96
VPS50-218ENST00000485994 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms