RNA–Protein interactions for RNA: ENST00000485556.5

STRC-211, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 4,253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-211ENST00000485556 ARHGEF10O15013 1369 aa11.71□□□□□ -0.54
STRC-211ENST00000485556 STX6O43752 255 aa11.71□□□□□ -0.54
STRC-211ENST00000485556 TTF1Q15361 905 aaPredicted RBP11.71□□□□□ -0.54
STRC-211ENST00000485556 CAMK4Q16566 473 aa11.71□□□□□ -0.54
STRC-211ENST00000485556 DZIP3Q86Y13 1208 aaKnown RBP11.71□□□□□ -0.54
STRC-211ENST00000485556 NECAB1Q8N987 351 aa11.71□□□□□ -0.54
STRC-211ENST00000485556 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.54
STRC-211ENST00000485556 TFIP11Q9UBB9 837 aaKnown RBP11.71□□□□□ -0.54
STRC-211ENST00000485556 NIP7Q9Y221 180 aaKnown RBP eCLIP11.71□□□□□ -0.54
STRC-211ENST00000485556 R3HCC1Q9Y3T6 440 aaKnown RBP11.71□□□□□ -0.54
STRC-211ENST00000485556 NBPF5PQ86XG9 351 aaPredicted RBP11.7□□□□□ -0.54
STRC-211ENST00000485556 WASF1Q92558 559 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 BRF1Q92994 677 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 ZNF496Q96IT1 587 aaPredicted RBP11.7□□□□□ -0.54
STRC-211ENST00000485556 CDK5RAP3Q96JB5 506 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 MKNK2Q9HBH9 465 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 FAM13BQ9NYF5 915 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 HMG20BQ9P0W2 317 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 SYNMO15061 1565 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 POLR3DP05423 398 aaPredicted RBP11.7□□□□□ -0.54
STRC-211ENST00000485556 NBPF7P0C2Y1 421 aaPredicted RBP11.7□□□□□ -0.54
STRC-211ENST00000485556 CCDC152Q4G0S7 254 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 RAB11FIP4Q86YS3 637 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 LRRC2Q9BYS8 371 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 KIF1BO60333 1816 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 MAP3K11Q16584 847 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
STRC-211ENST00000485556 SLAIN2Q9P270 581 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 TET3O43151 1660 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 IQGAP3Q86VI3 1631 aa11.7□□□□□ -0.54
STRC-211ENST00000485556 TTC41PQ6P2S7 1318 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 PNMA6EA0A0J9YXQ4 647 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 RFC4P35249 363 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 BRPF1P55201 1214 aaPredicted RBP11.69□□□□□ -0.54
STRC-211ENST00000485556 ANAPC15P60006 121 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 IQCA1Q86XH1 822 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 EIF4A1P60842 406 aaKnown RBP11.69□□□□□ -0.54
STRC-211ENST00000485556 KLHDC4Q8TBB5 520 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 SLC52A2Q9HAB3 445 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 SLC12A7Q9Y666 1083 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 ARAP3Q8WWN8 1544 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 ZNF521Q96K83 1311 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 KCNQ3O43525 872 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 A1BGP04217 495 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 CHMLP26374 656 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 NMIQ13287 307 aaPredicted RBP11.69□□□□□ -0.54
STRC-211ENST00000485556 HSP90AA2PQ14568 343 aaPredicted RBP11.69□□□□□ -0.54
STRC-211ENST00000485556 USP16Q9Y5T5 823 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 CCDC196A0A1B0GTZ2 297 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 UQCRFS1P1P0C7P4 283 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 TFCP2Q12800 502 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 MICU3Q86XE3 530 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 CEP57L1Q8IYX8 460 aa11.69□□□□□ -0.54
STRC-211ENST00000485556 HELBQ8NG08 1087 aaPredicted RBP11.69□□□□□ -0.54
STRC-211ENST00000485556 SMARCC1Q92922 1105 aaPredicted RBP11.69□□□□□ -0.54
STRC-211ENST00000485556 RNF41Q9H4P4 317 aaPredicted RBP11.69□□□□□ -0.54
STRC-211ENST00000485556 SERPINC1P01008 464 aa11.68□□□□□ -0.54
STRC-211ENST00000485556 TRMT2AQ8IZ69 625 aaKnown RBP11.68□□□□□ -0.54
STRC-211ENST00000485556 SHROOM2Q13796 1616 aa11.68□□□□□ -0.54
STRC-211ENST00000485556 GOLGA8AA7E2F4 631 aa11.68□□□□□ -0.54
STRC-211ENST00000485556 CTCFLQ8NI51 663 aaPredicted RBP11.68□□□□□ -0.54
STRC-211ENST00000485556 FAM89AQ96GI7 184 aa11.68□□□□□ -0.54
STRC-211ENST00000485556 MCMDC2Q4G0Z9 681 aa11.68□□□□□ -0.54
STRC-211ENST00000485556 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
STRC-211ENST00000485556 SNX21Q969T3 373 aa11.68□□□□□ -0.54
STRC-211ENST00000485556 AATKQ6ZMQ8 1374 aa11.68□□□□□ -0.54
STRC-211ENST00000485556 KIAA0232Q92628 1395 aa11.68□□□□□ -0.54
STRC-211ENST00000485556 IRS4O14654 1257 aaPredicted RBP11.67□□□□□ -0.54
STRC-211ENST00000485556 ZFYP08048 801 aaPredicted RBP11.67□□□□□ -0.54
STRC-211ENST00000485556 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
STRC-211ENST00000485556 LMTK3Q96Q04 1460 aa11.67□□□□□ -0.54
STRC-211ENST00000485556 HMGB2P26583 209 aaKnown RBP11.67□□□□□ -0.54
STRC-211ENST00000485556 ANKRD18AQ8IVF6 992 aa11.67□□□□□ -0.54
STRC-211ENST00000485556 METTL22Q9BUU2 404 aaPredicted RBP11.67□□□□□ -0.54
STRC-211ENST00000485556 NLRP1Q9C000 1473 aa11.67□□□□□ -0.54
STRC-211ENST00000485556 FILIP1LQ4L180 1135 aa11.67□□□□□ -0.54
STRC-211ENST00000485556 TMEM67Q5HYA8 995 aa11.67□□□□□ -0.54
STRC-211ENST00000485556 SLC9C2Q5TAH2 1124 aa11.67□□□□□ -0.54
STRC-211ENST00000485556 NCOA7Q8NI08 942 aa11.67□□□□□ -0.54
STRC-211ENST00000485556 SETDB2Q96T68 719 aa11.67□□□□□ -0.54
STRC-211ENST00000485556 PAG1Q9NWQ8 432 aa11.67□□□□□ -0.54
STRC-211ENST00000485556 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
STRC-211ENST00000485556 ATP7BP35670 1465 aa11.67□□□□□ -0.54
STRC-211ENST00000485556 NLRP3Q96P20 1036 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 ZNF287Q9HBT7 754 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 CLTCL1P53675 1640 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 KCNA4P22459 653 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 TIMM10P62072 90 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 ARHGAP31Q2M1Z3 1444 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 CCDC183Q5T5S1 534 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 FILIP1Q7Z7B0 1213 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 PLBD2Q8NHP8 589 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 KRT18P05783 430 aaKnown RBP11.66□□□□□ -0.54
STRC-211ENST00000485556 USP26Q9BXU7 913 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 ABCC4O15439 1325 aa11.66□□□□□ -0.54
STRC-211ENST00000485556 ZNF444Q8N0Y2 327 aaPredicted RBP11.66□□□□□ -0.54
STRC-211ENST00000485556 UTP14AQ9BVJ6 771 aaKnown RBP11.66□□□□□ -0.54
STRC-211ENST00000485556 TMEM94Q12767 1356 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms