RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 NOL8Q76FK4 1167 aaKnown RBP11.08□□□□□ -0.64
USP16-206ENST00000485067 KDM4CQ9H3R0 1056 aa11.08□□□□□ -0.64
USP16-206ENST00000485067 ALS2Q96Q42 1657 aa11.08□□□□□ -0.64
USP16-206ENST00000485067 AOX1Q06278 1338 aa11.08□□□□□ -0.64
USP16-206ENST00000485067 TRAK2O60296 914 aa11.07□□□□□ -0.64
USP16-206ENST00000485067 MKL1Q969V6 931 aa11.07□□□□□ -0.64
USP16-206ENST00000485067 SALL3Q9BXA9 1300 aa11.07□□□□□ -0.64
USP16-206ENST00000485067 UBTFL1P0CB47 393 aaPredicted RBP11.07□□□□□ -0.64
USP16-206ENST00000485067 EIF4A1P60842 406 aaKnown RBP11.07□□□□□ -0.64
USP16-206ENST00000485067 ST18O60284 1047 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 RAB11FIP3O75154 756 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 SKOR2Q2VWA4 1001 aaPredicted RBP11.06□□□□□ -0.64
USP16-206ENST00000485067 TNPO1Q92973 898 aaKnown RBP11.06□□□□□ -0.64
USP16-206ENST00000485067 USP44Q9H0E7 712 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 GZF1Q9H116 711 aaPredicted RBP11.06□□□□□ -0.64
USP16-206ENST00000485067 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 STAP2Q9UGK3 403 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 XIRP1Q702N8 1843 aaKnown RBP11.06□□□□□ -0.64
USP16-206ENST00000485067 CD2BP2O95400 341 aaKnown RBP11.06□□□□□ -0.64
USP16-206ENST00000485067 MX1P20591 662 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 TERF1P54274 439 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 TEFQ10587 303 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 CLEC17AQ6ZS10 378 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 SSH3Q8TE77 659 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 ISY1Q9ULR0 285 aaKnown RBP11.06□□□□□ -0.64
USP16-206ENST00000485067 EXOC6BQ9Y2D4 811 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 ERBB3P21860 1342 aa11.06□□□□□ -0.64
USP16-206ENST00000485067 STK25O00506 426 aa11.05□□□□□ -0.64
USP16-206ENST00000485067 RNMTO43148 476 aaKnown RBP11.05□□□□□ -0.64
USP16-206ENST00000485067 SCP2P22307 547 aa11.05□□□□□ -0.64
USP16-206ENST00000485067 BORCS6Q96GS4 357 aa11.05□□□□□ -0.64
USP16-206ENST00000485067 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
USP16-206ENST00000485067 CHPF2Q9P2E5 772 aa11.05□□□□□ -0.64
USP16-206ENST00000485067 LRRFIP2Q9Y608 721 aaKnown RBP11.05□□□□□ -0.64
USP16-206ENST00000485067 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
USP16-206ENST00000485067 PNMA6EA0A0J9YXQ4 647 aa11.05□□□□□ -0.64
USP16-206ENST00000485067 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
USP16-206ENST00000485067 BTBD11A6QL63 1104 aa11.05□□□□□ -0.64
USP16-206ENST00000485067 EPB41L2O43491 1005 aaKnown RBP11.05□□□□□ -0.64
USP16-206ENST00000485067 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
USP16-206ENST00000485067 GOLGA6CA6NDK9 693 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 GOLGA6BA6NDN3 693 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 GOLGA6DP0CG33 693 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 PROSER3Q2NL68 480 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 TMCO4Q5TGY1 634 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 MSL3Q8N5Y2 521 aaKnown RBP11.04□□□□□ -0.64
USP16-206ENST00000485067 NLRP2Q9NX02 1062 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 GOLGA6AQ9NYA3 693 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 AK9Q5TCS8 1911 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 FSD2A1L4K1 749 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 NUCB2P80303 420 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 TSHZ3Q63HK5 1081 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 TSPYL1Q9H0U9 437 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
USP16-206ENST00000485067 CGNQ9P2M7 1197 aaKnown RBP11.04□□□□□ -0.64
USP16-206ENST00000485067 MCM2P49736 904 aa11.03□□□□□ -0.64
USP16-206ENST00000485067 SLC39A6Q13433 755 aa11.03□□□□□ -0.64
USP16-206ENST00000485067 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
USP16-206ENST00000485067 DNAAF4Q8WXU2 420 aa11.03□□□□□ -0.64
USP16-206ENST00000485067 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
USP16-206ENST00000485067 ZNF335Q9H4Z2 1342 aaPredicted RBP11.03□□□□□ -0.64
USP16-206ENST00000485067 CT47A1Q5JQC4 288 aaPredicted RBP11.02□□□□□ -0.64
USP16-206ENST00000485067 APBB1IPQ7Z5R6 666 aaPredicted RBP11.02□□□□□ -0.64
USP16-206ENST00000485067 MYCBPQ99417 103 aaPredicted RBP11.02□□□□□ -0.64
USP16-206ENST00000485067 ESYT1Q9BSJ8 1104 aa11.02□□□□□ -0.64
USP16-206ENST00000485067 TRAIPQ9BWF2 469 aa11.02□□□□□ -0.64
USP16-206ENST00000485067 COL18A1P39060 1754 aa11.02□□□□□ -0.64
USP16-206ENST00000485067 MEGF6O75095 1541 aa11.02□□□□□ -0.65
USP16-206ENST00000485067 STRCQ7RTU9 1775 aa11.02□□□□□ -0.65
USP16-206ENST00000485067 CCDC172P0C7W6 258 aa11.02□□□□□ -0.65
USP16-206ENST00000485067 IRF5Q13568 498 aa11.02□□□□□ -0.65
USP16-206ENST00000485067 BEND3Q5T5X7 828 aa11.02□□□□□ -0.65
USP16-206ENST00000485067 ITFG2Q969R8 447 aa11.02□□□□□ -0.65
USP16-206ENST00000485067 MTA3Q9BTC8 594 aa11.02□□□□□ -0.65
USP16-206ENST00000485067 PLEKHG2Q9H7P9 1386 aa11.02□□□□□ -0.65
USP16-206ENST00000485067 HEG1Q9ULI3 1381 aa11.02□□□□□ -0.65
USP16-206ENST00000485067 DHX16O60231 1041 aaKnown RBP11.01□□□□□ -0.65
USP16-206ENST00000485067 BRINP3Q76B58 766 aa11.01□□□□□ -0.65
USP16-206ENST00000485067 IL17RAQ96F46 866 aa11.01□□□□□ -0.65
USP16-206ENST00000485067 NUB1Q9Y5A7 615 aa11.01□□□□□ -0.65
USP16-206ENST00000485067 ABCC6O95255 1503 aa11.01□□□□□ -0.65
USP16-206ENST00000485067 CRYBG1Q9Y4K1 1723 aa11.01□□□□□ -0.65
USP16-206ENST00000485067 ALDH1L1O75891 902 aa11.01□□□□□ -0.65
USP16-206ENST00000485067 SSFA2P28290 1259 aa11.01□□□□□ -0.65
USP16-206ENST00000485067 PPP1R42Q7Z4L9 355 aa11.01□□□□□ -0.65
USP16-206ENST00000485067 KIF1BPQ96EK5 621 aa11.01□□□□□ -0.65
USP16-206ENST00000485067 FEZ2Q9UHY8 353 aaPredicted RBP11.01□□□□□ -0.65
USP16-206ENST00000485067 KDM6AO15550 1401 aaPredicted RBP11□□□□□ -0.65
USP16-206ENST00000485067 PI4KAP2A4QPH2 592 aa11□□□□□ -0.65
USP16-206ENST00000485067 ESPNB1AK53 854 aa11□□□□□ -0.65
USP16-206ENST00000485067 TRIM6-TRIM34B2RNG4 842 aa11□□□□□ -0.65
USP16-206ENST00000485067 NBPF7P0C2Y1 421 aaPredicted RBP11□□□□□ -0.65
USP16-206ENST00000485067 CHMLP26374 656 aa11□□□□□ -0.65
USP16-206ENST00000485067 CALRP27797 417 aaKnown RBP11□□□□□ -0.65
USP16-206ENST00000485067 MRE11P49959 708 aa11□□□□□ -0.65
USP16-206ENST00000485067 PI4KAP1Q8N8J0 262 aa11□□□□□ -0.65
USP16-206ENST00000485067 FAM117AQ9C073 453 aa11□□□□□ -0.65
USP16-206ENST00000485067 TNS3Q68CZ2 1445 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms