RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 RECKO95980 971 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 SPDYE6P0CI01 402 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 SPDYE2Q495Y8 402 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 AKAP4Q5JQC9 854 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 SPOCK3Q9BQ16 436 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 POLR3EQ9NVU0 708 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 KNSTRNQ9Y448 316 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 C10orf71Q711Q0 1435 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 ADCY9O60503 1353 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 PIGBQ92521 554 aa6.83□□□□□ -1.32
CCDC39-205ENST00000485055 DICER1Q9UPY3 1922 aaKnown RBP6.82□□□□□ -1.32
CCDC39-205ENST00000485055 PSDA5PKW4 1024 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-205ENST00000485055 ABL2P42684 1182 aa6.82□□□□□ -1.32
CCDC39-205ENST00000485055 SH3D19Q5HYK7 790 aa6.82□□□□□ -1.32
CCDC39-205ENST00000485055 SPACA7Q96KW9 195 aa6.82□□□□□ -1.32
CCDC39-205ENST00000485055 FAN1Q9Y2M0 1017 aa6.82□□□□□ -1.32
CCDC39-205ENST00000485055 RIC1Q4ADV7 1423 aa6.82□□□□□ -1.32
CCDC39-205ENST00000485055 MCCD1P59942 119 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-205ENST00000485055 SF3A1Q15459 793 aaKnown RBP6.82□□□□□ -1.32
CCDC39-205ENST00000485055 ZFYVE27Q5T4F4 411 aa6.82□□□□□ -1.32
CCDC39-205ENST00000485055 MORC1Q86VD1 984 aa6.82□□□□□ -1.32
CCDC39-205ENST00000485055 CCER1Q8TC90 406 aaPredicted RBP6.82□□□□□ -1.32
CCDC39-205ENST00000485055 ATG3Q9NT62 314 aa6.82□□□□□ -1.32
CCDC39-205ENST00000485055 DCAF8L1A6NGE4 600 aa6.81□□□□□ -1.32
CCDC39-205ENST00000485055 NLGN1Q8N2Q7 840 aa6.81□□□□□ -1.32
CCDC39-205ENST00000485055 CCNL1Q9UK58 526 aaPredicted RBP6.81□□□□□ -1.32
CCDC39-205ENST00000485055 U2SURPO15042 1029 aaKnown RBP6.81□□□□□ -1.32
CCDC39-205ENST00000485055 MAP2K5Q13163 448 aa6.81□□□□□ -1.32
CCDC39-205ENST00000485055 ZNF467Q7Z7K2 595 aaPredicted RBP6.81□□□□□ -1.32
CCDC39-205ENST00000485055 GNEQ9Y223 722 aaKnown RBP6.81□□□□□ -1.32
CCDC39-205ENST00000485055 HEG1Q9ULI3 1381 aa6.81□□□□□ -1.32
CCDC39-205ENST00000485055 SBF1O95248 1867 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 SH3BP5O60239 455 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 EGFLAMQ63HQ2 1017 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 BABAM1Q9NWV8 329 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 CHPF2Q9P2E5 772 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 TNRC6CQ9HCJ0 1690 aaKnown RBP6.8□□□□□ -1.32
CCDC39-205ENST00000485055 hCG_2014768A0A024R1R8 64 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 LOC102724428A0A0B4J2F2 783 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 RPS6KA4O75676 772 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 FBLN1P23142 703 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 SIK1P57059 783 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 LONRF3Q496Y0 759 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 COL23A1Q86Y22 540 aaPredicted RBP6.8□□□□□ -1.32
CCDC39-205ENST00000485055 SMC5Q8IY18 1101 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 SYT17Q9BSW7 474 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 ANKRD31Q8N7Z5 1873 aa6.8□□□□□ -1.32
CCDC39-205ENST00000485055 KIF4AO95239 1232 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 PYGBP11216 843 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 DDX54Q8TDD1 881 aaKnown RBP6.79□□□□□ -1.32
CCDC39-205ENST00000485055 TMOD3Q9NYL9 352 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 PXDNLA1KZ92 1463 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 ANKRD36CQ5JPF3 1778 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 PTPROQ16827 1216 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 DHX38Q92620 1227 aaKnown RBP6.79□□□□□ -1.32
CCDC39-205ENST00000485055 ACSBG1Q96GR2 724 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 SLC52A2Q9HAB3 445 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 PDZRN3Q9UPQ7 1066 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 POLD1P28340 1107 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 TGFB2P61812 414 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 TSNAXIP1Q2TAA8 658 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 LINC00116Q8NCU8 138 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 PCGF6Q9BYE7 350 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 PIF1Q9H611 641 aa6.79□□□□□ -1.32
CCDC39-205ENST00000485055 FER1L6Q2WGJ9 1857 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 IBTKQ9P2D0 1353 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-205ENST00000485055 RNMTO43148 476 aaKnown RBP6.78□□□□□ -1.32
CCDC39-205ENST00000485055 DIAPH1O60610 1272 aaKnown RBP6.78□□□□□ -1.32
CCDC39-205ENST00000485055 FCHSD2O94868 740 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 IGBP1P78318 339 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 NPAS4Q8IUM7 802 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 MTMR14Q8NCE2 650 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 SLC4A9Q96Q91 983 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 MTA3Q9BTC8 594 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 TEX13AQ9BXU3 409 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-205ENST00000485055 TMA7Q9Y2S6 64 aaKnown RBP6.78□□□□□ -1.32
CCDC39-205ENST00000485055 N4BP2Q86UW6 1770 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-205ENST00000485055 ITPK1Q13572 414 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 HDGFL1Q5TGJ6 251 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 G3BP2Q9UN86 482 aaKnown RBP6.78□□□□□ -1.32
CCDC39-205ENST00000485055 TBC1D2BQ9UPU7 963 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 LAMB2P55268 1798 aa6.78□□□□□ -1.32
CCDC39-205ENST00000485055 SOX12O15370 315 aa6.77□□□□□ -1.33
CCDC39-205ENST00000485055 GRIN3BO60391 1043 aa6.77□□□□□ -1.33
CCDC39-205ENST00000485055 MTHFSP49914 203 aa6.77□□□□□ -1.33
CCDC39-205ENST00000485055 USHBP1Q8N6Y0 703 aa6.77□□□□□ -1.33
CCDC39-205ENST00000485055 GAS2L2Q8NHY3 880 aa6.77□□□□□ -1.33
CCDC39-205ENST00000485055 LTV1Q96GA3 475 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-205ENST00000485055 SOS1Q07889 1333 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-205ENST00000485055 TLDC2A0PJX2 215 aa6.77□□□□□ -1.33
CCDC39-205ENST00000485055 CCER2I3L3R5 266 aa6.77□□□□□ -1.33
CCDC39-205ENST00000485055 ERCC5P28715 1186 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-205ENST00000485055 APLP1P51693 650 aa6.77□□□□□ -1.33
CCDC39-205ENST00000485055 CCDC144BQ3MJ40 725 aa6.77□□□□□ -1.33
CCDC39-205ENST00000485055 KRBA2Q6ZNG9 492 aa6.77□□□□□ -1.33
CCDC39-205ENST00000485055 METTL14Q9HCE5 456 aaKnown RBP6.77□□□□□ -1.33
CCDC39-205ENST00000485055 PTMAP06454 111 aaKnown RBP6.76□□□□□ -1.33
CCDC39-205ENST00000485055 TM4SF1P30408 202 aa6.76□□□□□ -1.33
CCDC39-205ENST00000485055 FHDC1Q9C0D6 1143 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-205ENST00000485055 UBA5Q9GZZ9 404 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms