RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 KCNQ4P56696 695 aa12.3□□□□□ -0.44
UBR3-210ENST00000484596 SPEM2Q0P670 501 aa12.3□□□□□ -0.44
UBR3-210ENST00000484596 HIF1AQ16665 826 aa12.3□□□□□ -0.44
UBR3-210ENST00000484596 KCNH4Q9UQ05 1017 aa12.3□□□□□ -0.44
UBR3-210ENST00000484596 SIN3BO75182 1162 aa12.29□□□□□ -0.44
UBR3-210ENST00000484596 RAB44Q7Z6P3 723 aaPredicted RBP12.29□□□□□ -0.44
UBR3-210ENST00000484596 ELOA3CA0A087WX78 387 aaPredicted RBP12.28□□□□□ -0.44
UBR3-210ENST00000484596 ELOA3DA6NLF2 546 aaPredicted RBP12.28□□□□□ -0.44
UBR3-210ENST00000484596 COL8A1P27658 744 aa12.28□□□□□ -0.44
UBR3-210ENST00000484596 ELOA3BQ3SY89 546 aa12.28□□□□□ -0.44
UBR3-210ENST00000484596 ELOA3Q8NG57 546 aa12.28□□□□□ -0.44
UBR3-210ENST00000484596 SUV39H2Q9H5I1 410 aa12.28□□□□□ -0.44
UBR3-210ENST00000484596 BCS1LQ9Y276 419 aa12.28□□□□□ -0.44
UBR3-210ENST00000484596 USTQ9Y2C2 406 aa12.28□□□□□ -0.44
UBR3-210ENST00000484596 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
UBR3-210ENST00000484596 PLA2G4EQ3MJ16 856 aa12.27□□□□□ -0.45
UBR3-210ENST00000484596 RETREG2Q8NC44 543 aa12.27□□□□□ -0.45
UBR3-210ENST00000484596 MDFIQ99750 246 aa12.27□□□□□ -0.45
UBR3-210ENST00000484596 GNB5O14775 395 aa12.26□□□□□ -0.45
UBR3-210ENST00000484596 FOXO3O43524 673 aa12.26□□□□□ -0.45
UBR3-210ENST00000484596 KLK14Q9P0G3 267 aa12.26□□□□□ -0.45
UBR3-210ENST00000484596 ITGB2P05107 769 aa12.25□□□□□ -0.45
UBR3-210ENST00000484596 ALAS2P22557 587 aa12.25□□□□□ -0.45
UBR3-210ENST00000484596 IER5Q5VY09 327 aa12.25□□□□□ -0.45
UBR3-210ENST00000484596 QTRT2Q9H974 415 aaKnown RBP12.25□□□□□ -0.45
UBR3-210ENST00000484596 DMGDHQ9UI17 866 aaKnown RBP12.25□□□□□ -0.45
UBR3-210ENST00000484596 ZMIZ1Q9ULJ6 1067 aa12.25□□□□□ -0.45
UBR3-210ENST00000484596 ADARB2-AS1A8MUL3 147 aa12.24□□□□□ -0.45
UBR3-210ENST00000484596 TGFBR3LH3BV60 316 aa12.24□□□□□ -0.45
UBR3-210ENST00000484596 IGHA1P01876 353 aa12.24□□□□□ -0.45
UBR3-210ENST00000484596 NEUROD1Q13562 356 aa12.24□□□□□ -0.45
UBR3-210ENST00000484596 KRBA1A5PL33 1030 aa12.23□□□□□ -0.45
UBR3-210ENST00000484596 PIK3R2O00459 728 aa12.23□□□□□ -0.45
UBR3-210ENST00000484596 TNFRSF25Q93038 417 aa12.23□□□□□ -0.45
UBR3-210ENST00000484596 VTI1AQ96AJ9 217 aa12.23□□□□□ -0.45
UBR3-210ENST00000484596 PRIMPOLQ96LW4 560 aa12.23□□□□□ -0.45
UBR3-210ENST00000484596 STK32AQ8WU08 396 aa12.22□□□□□ -0.45
UBR3-210ENST00000484596 BHMTQ93088 406 aa12.22□□□□□ -0.45
UBR3-210ENST00000484596 TRAIPQ9BWF2 469 aa12.22□□□□□ -0.45
UBR3-210ENST00000484596 FAM69CQ0P6D2 419 aa12.21□□□□□ -0.45
UBR3-210ENST00000484596 DGKZQ13574 1117 aa12.21□□□□□ -0.45
UBR3-210ENST00000484596 SWI5Q1ZZU3 235 aa12.21□□□□□ -0.45
UBR3-210ENST00000484596 ALYREFQ86V81 257 aaKnown RBP12.21□□□□□ -0.45
UBR3-210ENST00000484596 FKBP5Q13451 457 aaPredicted RBP12.2□□□□□ -0.46
UBR3-210ENST00000484596 PRMT3O60678 531 aa12.19□□□□□ -0.46
UBR3-210ENST00000484596 ADH7P40394 386 aa12.19□□□□□ -0.46
UBR3-210ENST00000484596 MYO19Q96H55 970 aa12.19□□□□□ -0.46
UBR3-210ENST00000484596 GSX2Q9BZM3 304 aa12.19□□□□□ -0.46
UBR3-210ENST00000484596 MSTNO14793 375 aa12.18□□□□□ -0.46
UBR3-210ENST00000484596 INPP5BP32019 993 aa12.18□□□□□ -0.46
UBR3-210ENST00000484596 IDH3AP50213 366 aa12.18□□□□□ -0.46
UBR3-210ENST00000484596 C11orf91Q3C1V1 193 aa12.18□□□□□ -0.46
UBR3-210ENST00000484596 TRIM11Q96F44 468 aa12.18□□□□□ -0.46
UBR3-210ENST00000484596 SPOCK3Q9BQ16 436 aa12.18□□□□□ -0.46
UBR3-210ENST00000484596 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.18□□□□□ -0.46
UBR3-210ENST00000484596 NOP53Q9NZM5 478 aaKnown RBP12.18□□□□□ -0.46
UBR3-210ENST00000484596 STARD13Q9Y3M8 1113 aa12.18□□□□□ -0.46
UBR3-210ENST00000484596 GRNP28799 593 aaKnown RBP12.17□□□□□ -0.46
UBR3-210ENST00000484596 OCLNQ16625 522 aa12.17□□□□□ -0.46
UBR3-210ENST00000484596 LRFN2Q9ULH4 789 aa12.17□□□□□ -0.46
UBR3-210ENST00000484596 MICAL2O94851 1124 aa12.16□□□□□ -0.46
UBR3-210ENST00000484596 TMEM164Q5U3C3 297 aa12.16□□□□□ -0.46
UBR3-210ENST00000484596 PLVAPQ9BX97 442 aa12.16□□□□□ -0.46
UBR3-210ENST00000484596 TMEM88BA6NKF7 163 aa12.15□□□□□ -0.46
UBR3-210ENST00000484596 M0R082 166 aa12.15□□□□□ -0.46
UBR3-210ENST00000484596 CCINQ13939 588 aa12.15□□□□□ -0.46
UBR3-210ENST00000484596 ZNF417Q8TAU3 575 aa12.15□□□□□ -0.46
UBR3-210ENST00000484596 ZNF587Q96SQ5 575 aaPredicted RBP12.15□□□□□ -0.46
UBR3-210ENST00000484596 IGFLR1Q9H665 355 aa12.15□□□□□ -0.46
UBR3-210ENST00000484596 EFCC1Q9HA90 598 aa12.15□□□□□ -0.46
UBR3-210ENST00000484596 ALBP02768 609 aa12.14□□□□□ -0.47
UBR3-210ENST00000484596 PROCP04070 461 aa12.14□□□□□ -0.47
UBR3-210ENST00000484596 EPB42P16452 691 aa12.14□□□□□ -0.47
UBR3-210ENST00000484596 TBC1D8BQ0IIM8 1120 aa12.14□□□□□ -0.47
UBR3-210ENST00000484596 COX20Q5RI15 118 aa12.14□□□□□ -0.47
UBR3-210ENST00000484596 C8orf86Q6ZUL3 223 aa12.14□□□□□ -0.47
UBR3-210ENST00000484596 MICALL1Q8N3F8 863 aa12.14□□□□□ -0.47
UBR3-210ENST00000484596 IFT43Q96FT9 208 aa12.14□□□□□ -0.47
UBR3-210ENST00000484596 PNMA5Q96PV4 448 aa12.14□□□□□ -0.47
UBR3-210ENST00000484596 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.14□□□□□ -0.47
UBR3-210ENST00000484596 ARSDP51689 593 aa12.13□□□□□ -0.47
UBR3-210ENST00000484596 B4GALNT3Q6L9W6 998 aa12.13□□□□□ -0.47
UBR3-210ENST00000484596 UBE2OQ9C0C9 1292 aaKnown RBP12.13□□□□□ -0.47
UBR3-210ENST00000484596 NFKB1P19838 968 aa12.12□□□□□ -0.47
UBR3-210ENST00000484596 COL9A3Q14050 684 aaPredicted RBP12.12□□□□□ -0.47
UBR3-210ENST00000484596 OPLAHO14841 1288 aa12.11□□□□□ -0.47
UBR3-210ENST00000484596 C20orf204Q6ZNR8 217 aa12.11□□□□□ -0.47
UBR3-210ENST00000484596 PRDM6Q9NQX0 595 aa12.11□□□□□ -0.47
UBR3-210ENST00000484596 SUZ12Q15022 739 aaKnown RBP12.1□□□□□ -0.47
UBR3-210ENST00000484596 CLP1Q92989 425 aaKnown RBP12.1□□□□□ -0.47
UBR3-210ENST00000484596 SAP130Q9H0E3 1048 aa12.1□□□□□ -0.47
UBR3-210ENST00000484596 DNAJB12Q9NXW2 375 aaKnown RBP12.1□□□□□ -0.47
UBR3-210ENST00000484596 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
UBR3-210ENST00000484596 SLC6A14Q9UN76 642 aa12.1□□□□□ -0.47
UBR3-210ENST00000484596 C1QTNF9BB2RNN3 333 aa12.09□□□□□ -0.47
UBR3-210ENST00000484596 CAPN12Q6ZSI9 719 aa12.09□□□□□ -0.47
UBR3-210ENST00000484596 TREML1Q86YW5 311 aa12.09□□□□□ -0.47
UBR3-210ENST00000484596 USP20Q9Y2K6 914 aa12.09□□□□□ -0.47
UBR3-210ENST00000484596 PATL2C9JE40 543 aaKnown RBP12.08□□□□□ -0.48
UBR3-210ENST00000484596 BRD1O95696 1058 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms