RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 SLC30A3Q99726 388 aa9.85□□□□□ -0.83
CCDC66-219ENST00000484441 SAP130Q9H0E3 1048 aa9.85□□□□□ -0.83
CCDC66-219ENST00000484441 USTQ9Y2C2 406 aa9.85□□□□□ -0.83
CCDC66-219ENST00000484441 NEURL1BA8MQ27 555 aa9.84□□□□□ -0.83
CCDC66-219ENST00000484441 SPEM2Q0P670 501 aa9.84□□□□□ -0.83
CCDC66-219ENST00000484441 GALNT6Q8NCL4 622 aa9.84□□□□□ -0.83
CCDC66-219ENST00000484441 EDARADDQ8WWZ3 215 aa9.84□□□□□ -0.83
CCDC66-219ENST00000484441 TNFRSF10BO14763 440 aa9.83□□□□□ -0.84
CCDC66-219ENST00000484441 SIN3BO75182 1162 aa9.83□□□□□ -0.84
CCDC66-219ENST00000484441 SSFA2P28290 1259 aa9.83□□□□□ -0.84
CCDC66-219ENST00000484441 IDH3AP50213 366 aa9.83□□□□□ -0.84
CCDC66-219ENST00000484441 MKNK1Q9BUB5 465 aa9.83□□□□□ -0.84
CCDC66-219ENST00000484441 EFCC1Q9HA90 598 aa9.83□□□□□ -0.84
CCDC66-219ENST00000484441 C11orf16Q9NQ32 467 aa9.83□□□□□ -0.84
CCDC66-219ENST00000484441 PRR12Q9ULL5 1215 aa9.83□□□□□ -0.84
CCDC66-219ENST00000484441 DNMT3AQ9Y6K1 912 aaPredicted RBP9.83□□□□□ -0.84
CCDC66-219ENST00000484441 MICAL2O94851 1124 aa9.82□□□□□ -0.84
CCDC66-219ENST00000484441 HOXB4P17483 251 aaPredicted RBP9.82□□□□□ -0.84
CCDC66-219ENST00000484441 PCBP4P57723 403 aaKnown RBP9.82□□□□□ -0.84
CCDC66-219ENST00000484441 SYT9Q86SS6 491 aa9.82□□□□□ -0.84
CCDC66-219ENST00000484441 IFT43Q96FT9 208 aa9.82□□□□□ -0.84
CCDC66-219ENST00000484441 GSK3AP49840 483 aa9.81□□□□□ -0.84
CCDC66-219ENST00000484441 ARSDP51689 593 aa9.81□□□□□ -0.84
CCDC66-219ENST00000484441 TNFRSF25Q93038 417 aa9.81□□□□□ -0.84
CCDC66-219ENST00000484441 ARID3AQ99856 593 aa9.81□□□□□ -0.84
CCDC66-219ENST00000484441 ADARB2-AS1A8MUL3 147 aa9.8□□□□□ -0.84
CCDC66-219ENST00000484441 OPLAHO14841 1288 aa9.8□□□□□ -0.84
CCDC66-219ENST00000484441 EPB42P16452 691 aa9.8□□□□□ -0.84
CCDC66-219ENST00000484441 KCNMA1Q12791 1236 aa9.8□□□□□ -0.84
CCDC66-219ENST00000484441 PHLDB3Q6NSJ2 640 aa9.8□□□□□ -0.84
CCDC66-219ENST00000484441 ETFBKMTQ8IXQ9 262 aa9.8□□□□□ -0.84
CCDC66-219ENST00000484441 BRD2P25440 801 aaKnown RBP9.79□□□□□ -0.84
CCDC66-219ENST00000484441 FAM26DQ5JW98 314 aa9.79□□□□□ -0.84
CCDC66-219ENST00000484441 TREML1Q86YW5 311 aa9.79□□□□□ -0.84
CCDC66-219ENST00000484441 NEDD1Q8NHV4 660 aa9.79□□□□□ -0.84
CCDC66-219ENST00000484441 GSX2Q9BZM3 304 aa9.79□□□□□ -0.84
CCDC66-219ENST00000484441 RNF225M0QZC1 329 aaPredicted RBP9.78□□□□□ -0.84
CCDC66-219ENST00000484441 NEUROD1Q13562 356 aa9.78□□□□□ -0.84
CCDC66-219ENST00000484441 NAA30Q147X3 362 aaPredicted RBP9.78□□□□□ -0.84
CCDC66-219ENST00000484441 SCARF2Q96GP6 870 aaPredicted RBP9.78□□□□□ -0.84
CCDC66-219ENST00000484441 BTBD6Q96KE9 485 aa9.78□□□□□ -0.84
CCDC66-219ENST00000484441 SEPT3Q9UH03 358 aa9.78□□□□□ -0.84
CCDC66-219ENST00000484441 ELOA3CA0A087WX78 387 aaPredicted RBP9.77□□□□□ -0.85
CCDC66-219ENST00000484441 CARNS1A5YM72 827 aa9.77□□□□□ -0.85
CCDC66-219ENST00000484441 ELOA3DA6NLF2 546 aaPredicted RBP9.77□□□□□ -0.85
CCDC66-219ENST00000484441 MARSP56192 900 aaKnown RBP9.77□□□□□ -0.85
CCDC66-219ENST00000484441 ELOA3BQ3SY89 546 aa9.77□□□□□ -0.85
CCDC66-219ENST00000484441 RAB44Q7Z6P3 723 aaPredicted RBP9.77□□□□□ -0.85
CCDC66-219ENST00000484441 ELOA3Q8NG57 546 aa9.77□□□□□ -0.85
CCDC66-219ENST00000484441 EGFRP00533 1210 aa9.76□□□□□ -0.85
CCDC66-219ENST00000484441 DGKGP49619 791 aa9.76□□□□□ -0.85
CCDC66-219ENST00000484441 CCINQ13939 588 aa9.76□□□□□ -0.85
CCDC66-219ENST00000484441 STIM2Q9P246 746 aa9.76□□□□□ -0.85
CCDC66-219ENST00000484441 SCNN1AP37088 669 aa9.75□□□□□ -0.85
CCDC66-219ENST00000484441 SNRPNP63162 240 aaKnown RBP9.75□□□□□ -0.85
CCDC66-219ENST00000484441 CHSY3Q70JA7 882 aa9.75□□□□□ -0.85
CCDC66-219ENST00000484441 HELQQ8TDG4 1101 aa9.75□□□□□ -0.85
CCDC66-219ENST00000484441 RTCBQ9Y3I0 505 aaKnown RBP9.75□□□□□ -0.85
CCDC66-219ENST00000484441 RETREG2Q8NC44 543 aa9.74□□□□□ -0.85
CCDC66-219ENST00000484441 BHMTQ93088 406 aa9.74□□□□□ -0.85
CCDC66-219ENST00000484441 KCNMB2Q9Y691 235 aa9.74□□□□□ -0.85
CCDC66-219ENST00000484441 MAP3K6O95382 1288 aa9.73□□□□□ -0.85
CCDC66-219ENST00000484441 LINC00114Q6XXX2 140 aa9.73□□□□□ -0.85
CCDC66-219ENST00000484441 BEND7Q8N7W2 519 aaPredicted RBP9.73□□□□□ -0.85
CCDC66-219ENST00000484441 ABTB2Q8N961 1025 aa9.73□□□□□ -0.85
CCDC66-219ENST00000484441 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.73□□□□□ -0.85
CCDC66-219ENST00000484441 CNTNAP5Q8WYK1 1306 aa9.73□□□□□ -0.85
CCDC66-219ENST00000484441 ADH7P40394 386 aa9.72□□□□□ -0.85
CCDC66-219ENST00000484441 KANK3Q6NY19 840 aa9.72□□□□□ -0.85
CCDC66-219ENST00000484441 PODNQ7Z5L7 613 aa9.72□□□□□ -0.85
CCDC66-219ENST00000484441 MKL2Q9ULH7 1088 aa9.72□□□□□ -0.85
CCDC66-219ENST00000484441 PHF20L1A8MW92 1017 aa9.71□□□□□ -0.86
CCDC66-219ENST00000484441 NFKB1P19838 968 aa9.71□□□□□ -0.86
CCDC66-219ENST00000484441 AMPD1P23109 780 aa9.71□□□□□ -0.86
CCDC66-219ENST00000484441 RGL4Q8IZJ4 473 aa9.71□□□□□ -0.86
CCDC66-219ENST00000484441 ZFATQ9P243 1243 aa9.71□□□□□ -0.86
CCDC66-219ENST00000484441 USP20Q9Y2K6 914 aa9.71□□□□□ -0.86
CCDC66-219ENST00000484441 ZBTB39O15060 712 aa9.7□□□□□ -0.86
CCDC66-219ENST00000484441 ZAP70P43403 619 aa9.7□□□□□ -0.86
CCDC66-219ENST00000484441 TRIP4Q15650 581 aaPredicted RBP9.7□□□□□ -0.86
CCDC66-219ENST00000484441 B4GALNT3Q6L9W6 998 aa9.7□□□□□ -0.86
CCDC66-219ENST00000484441 GTF3C2Q8WUA4 911 aaPredicted RBP9.7□□□□□ -0.86
CCDC66-219ENST00000484441 PNMA5Q96PV4 448 aa9.7□□□□□ -0.86
CCDC66-219ENST00000484441 FAM13BQ9NYF5 915 aa9.7□□□□□ -0.86
CCDC66-219ENST00000484441 STARD13Q9Y3M8 1113 aa9.7□□□□□ -0.86
CCDC66-219ENST00000484441 NPR3P17342 541 aa9.69□□□□□ -0.86
CCDC66-219ENST00000484441 ALAS2P22557 587 aa9.69□□□□□ -0.86
CCDC66-219ENST00000484441 IRS1P35568 1242 aa9.69□□□□□ -0.86
CCDC66-219ENST00000484441 RASSF7Q02833 373 aa9.69□□□□□ -0.86
CCDC66-219ENST00000484441 PRDM6Q9NQX0 595 aa9.69□□□□□ -0.86
CCDC66-219ENST00000484441 XYLBO75191 536 aa9.68□□□□□ -0.86
CCDC66-219ENST00000484441 TARSP26639 723 aaKnown RBP9.68□□□□□ -0.86
CCDC66-219ENST00000484441 RRAGCQ9HB90 399 aa9.68□□□□□ -0.86
CCDC66-219ENST00000484441 SLC6A14Q9UN76 642 aa9.68□□□□□ -0.86
CCDC66-219ENST00000484441 GNB5O14775 395 aa9.67□□□□□ -0.86
CCDC66-219ENST00000484441 HOXD8P13378 290 aaPredicted RBP9.67□□□□□ -0.86
CCDC66-219ENST00000484441 PDE4CQ08493 712 aa9.67□□□□□ -0.86
CCDC66-219ENST00000484441 C20orf204Q6ZNR8 217 aa9.67□□□□□ -0.86
CCDC66-219ENST00000484441 CMTR1Q8N1G2 835 aaKnown RBP9.67□□□□□ -0.86
CCDC66-219ENST00000484441 PIK3R5Q8WYR1 880 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms