RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 SPATA31A7Q8IWB4 1347 aa12.16□□□□□ -0.46
COL8A1-207ENST00000483969 CSB-PGBD3P0DP91 1061 aa12.16□□□□□ -0.46
COL8A1-207ENST00000483969 AMPHP49418 695 aa12.16□□□□□ -0.46
COL8A1-207ENST00000483969 KCNH2Q12809 1159 aa12.16□□□□□ -0.46
COL8A1-207ENST00000483969 LARP1Q6PKG0 1096 aaKnown RBP12.16□□□□□ -0.46
COL8A1-207ENST00000483969 PARP9Q8IXQ6 854 aa12.16□□□□□ -0.46
COL8A1-207ENST00000483969 IP6K1Q92551 441 aa12.16□□□□□ -0.46
COL8A1-207ENST00000483969 CCDC7Q96M83 1385 aa12.16□□□□□ -0.46
COL8A1-207ENST00000483969 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
COL8A1-207ENST00000483969 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
COL8A1-207ENST00000483969 OVOS2A0A0J9YW53 1432 aa12.15□□□□□ -0.46
COL8A1-207ENST00000483969 OVOS2Q6IE36 1432 aa12.15□□□□□ -0.46
COL8A1-207ENST00000483969 SNRPBP14678 240 aaKnown RBP12.15□□□□□ -0.46
COL8A1-207ENST00000483969 NFX1Q12986 1120 aaKnown RBP12.15□□□□□ -0.46
COL8A1-207ENST00000483969 RSBN1LQ6PCB5 846 aaPredicted RBP12.15□□□□□ -0.46
COL8A1-207ENST00000483969 TOM1L2Q6ZVM7 507 aa12.15□□□□□ -0.46
COL8A1-207ENST00000483969 SEPT12Q8IYM1 358 aa12.15□□□□□ -0.46
COL8A1-207ENST00000483969 TBC1D2Q9BYX2 928 aa12.15□□□□□ -0.46
COL8A1-207ENST00000483969 THRAP3Q9Y2W1 955 aaKnown RBP12.15□□□□□ -0.46
COL8A1-207ENST00000483969 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
COL8A1-207ENST00000483969 TCP11L2Q8N4U5 519 aa12.14□□□□□ -0.47
COL8A1-207ENST00000483969 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
COL8A1-207ENST00000483969 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
COL8A1-207ENST00000483969 FBLN1P23142 703 aa12.13□□□□□ -0.47
COL8A1-207ENST00000483969 MORC1Q86VD1 984 aa12.13□□□□□ -0.47
COL8A1-207ENST00000483969 COL14A1Q05707 1796 aaKnown RBP12.13□□□□□ -0.47
COL8A1-207ENST00000483969 MAP3K19Q56UN5 1328 aa12.12□□□□□ -0.47
COL8A1-207ENST00000483969 WDR17Q8IZU2 1322 aa12.12□□□□□ -0.47
COL8A1-207ENST00000483969 PER1O15534 1290 aaPredicted RBP12.12□□□□□ -0.47
COL8A1-207ENST00000483969 RRS1Q15050 365 aaKnown RBP12.12□□□□□ -0.47
COL8A1-207ENST00000483969 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
COL8A1-207ENST00000483969 ZNF511Q8NB15 262 aa12.12□□□□□ -0.47
COL8A1-207ENST00000483969 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
COL8A1-207ENST00000483969 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
COL8A1-207ENST00000483969 NSD2O96028 1365 aa12.12□□□□□ -0.47
COL8A1-207ENST00000483969 NRKQ7Z2Y5 1582 aa12.12□□□□□ -0.47
COL8A1-207ENST00000483969 PIK3C2AO00443 1686 aa12.12□□□□□ -0.47
COL8A1-207ENST00000483969 MON2Q7Z3U7 1717 aa12.11□□□□□ -0.47
COL8A1-207ENST00000483969 CAMTA1Q9Y6Y1 1673 aa12.11□□□□□ -0.47
COL8A1-207ENST00000483969 HOXC9P31274 260 aa12.11□□□□□ -0.47
COL8A1-207ENST00000483969 CDCA7Q9BWT1 371 aaPredicted RBP12.11□□□□□ -0.47
COL8A1-207ENST00000483969 NLRP2Q9NX02 1062 aa12.11□□□□□ -0.47
COL8A1-207ENST00000483969 TRIM66O15016 1216 aa12.1□□□□□ -0.47
COL8A1-207ENST00000483969 SPTLC1O15269 473 aa12.1□□□□□ -0.47
COL8A1-207ENST00000483969 VARSP26640 1264 aaKnown RBP12.1□□□□□ -0.47
COL8A1-207ENST00000483969 KRT27Q7Z3Y8 459 aa12.1□□□□□ -0.47
COL8A1-207ENST00000483969 BAP1Q92560 729 aa12.1□□□□□ -0.47
COL8A1-207ENST00000483969 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
COL8A1-207ENST00000483969 AK7Q96M32 723 aa12.1□□□□□ -0.47
COL8A1-207ENST00000483969 ZBTB3Q9H5J0 574 aa12.1□□□□□ -0.47
COL8A1-207ENST00000483969 PHRF1Q9P1Y6 1649 aaKnown RBP12.1□□□□□ -0.47
COL8A1-207ENST00000483969 RGS12O14924 1447 aa12.1□□□□□ -0.47
COL8A1-207ENST00000483969 CRB1P82279 1406 aa12.1□□□□□ -0.47
COL8A1-207ENST00000483969 COL5A2P05997 1499 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-207ENST00000483969 KIF24Q5T7B8 1368 aa12.09□□□□□ -0.47
COL8A1-207ENST00000483969 TERTO14746 1132 aaKnown RBP12.09□□□□□ -0.47
COL8A1-207ENST00000483969 PPM1GO15355 546 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-207ENST00000483969 CAPN5O15484 640 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-207ENST00000483969 WIPF1O43516 503 aa12.09□□□□□ -0.47
COL8A1-207ENST00000483969 TNNT2P45379 298 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-207ENST00000483969 PDE3BQ13370 1112 aa12.09□□□□□ -0.47
COL8A1-207ENST00000483969 MPNDQ8N594 471 aa12.09□□□□□ -0.47
COL8A1-207ENST00000483969 TLL2Q9Y6L7 1015 aa12.09□□□□□ -0.47
COL8A1-207ENST00000483969 NFAT5O94916 1531 aa12.09□□□□□ -0.47
COL8A1-207ENST00000483969 BLMP54132 1417 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-207ENST00000483969 PRPF38BQ5VTL8 546 aaKnown RBP12.08□□□□□ -0.48
COL8A1-207ENST00000483969 LYPD8Q6UX82 237 aa12.08□□□□□ -0.48
COL8A1-207ENST00000483969 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
COL8A1-207ENST00000483969 ABCA3Q99758 1704 aa12.08□□□□□ -0.48
COL8A1-207ENST00000483969 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.48
COL8A1-207ENST00000483969 CRYBG1Q9Y4K1 1723 aa12.08□□□□□ -0.48
COL8A1-207ENST00000483969 RTL1A6NKG5 1358 aa12.07□□□□□ -0.48
COL8A1-207ENST00000483969 EXOC5O00471 708 aa12.07□□□□□ -0.48
COL8A1-207ENST00000483969 HSP90AB2PQ58FF8 381 aa12.07□□□□□ -0.48
COL8A1-207ENST00000483969 CC2D1BQ5T0F9 858 aaKnown RBP12.07□□□□□ -0.48
COL8A1-207ENST00000483969 CCDC125Q86Z20 511 aa12.07□□□□□ -0.48
COL8A1-207ENST00000483969 NWD2Q9ULI1 1742 aa12.07□□□□□ -0.48
COL8A1-207ENST00000483969 EMILIN1Q9Y6C2 1016 aa12.07□□□□□ -0.48
COL8A1-207ENST00000483969 CFAP99D6REC4 459 aa12.06□□□□□ -0.48
COL8A1-207ENST00000483969 BMP1P13497 986 aa12.06□□□□□ -0.48
COL8A1-207ENST00000483969 CTHP32929 405 aa12.06□□□□□ -0.48
COL8A1-207ENST00000483969 DDB1Q16531 1140 aa12.06□□□□□ -0.48
COL8A1-207ENST00000483969 ABCC6O95255 1503 aa12.06□□□□□ -0.48
COL8A1-207ENST00000483969 INSRP06213 1382 aa12.05□□□□□ -0.48
COL8A1-207ENST00000483969 FLT4P35916 1363 aa12.05□□□□□ -0.48
COL8A1-207ENST00000483969 INSM1Q01101 510 aaPredicted RBP12.05□□□□□ -0.48
COL8A1-207ENST00000483969 TRIM46Q7Z4K8 759 aa12.05□□□□□ -0.48
COL8A1-207ENST00000483969 PCDHB15Q9Y5E8 787 aa12.05□□□□□ -0.48
COL8A1-207ENST00000483969 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
COL8A1-207ENST00000483969 GLI3P10071 1580 aa12.05□□□□□ -0.48
COL8A1-207ENST00000483969 NPC1L1Q9UHC9 1359 aa12.05□□□□□ -0.48
COL8A1-207ENST00000483969 SMG6Q86US8 1419 aaKnown RBP12.04□□□□□ -0.48
COL8A1-207ENST00000483969 PLCH1Q4KWH8 1693 aa12.04□□□□□ -0.48
COL8A1-207ENST00000483969 LMO7Q8WWI1 1683 aa12.04□□□□□ -0.48
COL8A1-207ENST00000483969 IL2RBP14784 551 aa12.04□□□□□ -0.48
COL8A1-207ENST00000483969 CNGB1Q14028 1251 aaPredicted RBP12.04□□□□□ -0.48
COL8A1-207ENST00000483969 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
COL8A1-207ENST00000483969 MYOM1P52179 1685 aa12.03□□□□□ -0.48
COL8A1-207ENST00000483969 NNTQ13423 1086 aa12.03□□□□□ -0.48
COL8A1-207ENST00000483969 SF3B2Q13435 895 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms