RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 ABCC12Q96J65 1359 aa24.8■■□□□ 1.56
SNED1-210ENST00000483962 PXDNLA1KZ92 1463 aa24.79■■□□□ 1.56
SNED1-210ENST00000483962 ST5P78524 1137 aa24.79■■□□□ 1.56
SNED1-210ENST00000483962 NEXNQ0ZGT2 675 aa24.79■■□□□ 1.56
SNED1-210ENST00000483962 SYNE4Q8N205 404 aa24.79■■□□□ 1.56
SNED1-210ENST00000483962 CCDC191Q8NCU4 936 aa24.79■■□□□ 1.56
SNED1-210ENST00000483962 BRIP1Q9BX63 1249 aa24.79■■□□□ 1.56
SNED1-210ENST00000483962 GTF2E1P29083 439 aaPredicted RBP24.78■■□□□ 1.56
SNED1-210ENST00000483962 TGFB2P61812 414 aa24.78■■□□□ 1.56
SNED1-210ENST00000483962 CWF19L2Q2TBE0 894 aaKnown RBP24.78■■□□□ 1.56
SNED1-210ENST00000483962 TRMT112Q9UI30 125 aaKnown RBP24.78■■□□□ 1.56
SNED1-210ENST00000483962 A0A0G2JLW4 131 aa24.77■■□□□ 1.56
SNED1-210ENST00000483962 NEURL1BA8MQ27 555 aa24.77■■□□□ 1.56
SNED1-210ENST00000483962 CWC25Q9NXE8 425 aaPredicted RBP24.77■■□□□ 1.56
SNED1-210ENST00000483962 TNRC6CQ9HCJ0 1690 aaKnown RBP24.77■■□□□ 1.56
SNED1-210ENST00000483962 COL11A2P13942 1736 aaPredicted RBP24.76■■□□□ 1.55
SNED1-210ENST00000483962 DPEP1P16444 411 aa24.76■■□□□ 1.55
SNED1-210ENST00000483962 CHRNA5P30532 468 aa24.76■■□□□ 1.55
SNED1-210ENST00000483962 BEND3Q5T5X7 828 aa24.76■■□□□ 1.55
SNED1-210ENST00000483962 LINS1Q8NG48 757 aa24.76■■□□□ 1.55
SNED1-210ENST00000483962 RNF123Q5XPI4 1314 aa24.76■■□□□ 1.55
SNED1-210ENST00000483962 KCNA3P22001 575 aa24.75■■□□□ 1.55
SNED1-210ENST00000483962 SLC4A10Q6U841 1118 aa24.75■■□□□ 1.55
SNED1-210ENST00000483962 FAM89AQ96GI7 184 aa24.75■■□□□ 1.55
SNED1-210ENST00000483962 KIF16BQ96L93 1317 aa24.75■■□□□ 1.55
SNED1-210ENST00000483962 DLEC1Q9Y238 1755 aa24.75■■□□□ 1.55
SNED1-210ENST00000483962 BRCA1P38398 1863 aaKnown RBP24.75■■□□□ 1.55
SNED1-210ENST00000483962 PDE6BP35913 854 aa24.74■■□□□ 1.55
SNED1-210ENST00000483962 SLC10A5Q5PT55 438 aa24.74■■□□□ 1.55
SNED1-210ENST00000483962 JARID2Q92833 1246 aaPredicted RBP24.74■■□□□ 1.55
SNED1-210ENST00000483962 SH3TC1Q8TE82 1336 aa24.74■■□□□ 1.55
SNED1-210ENST00000483962 DDX60Q8IY21 1712 aaKnown RBP24.74■■□□□ 1.55
SNED1-210ENST00000483962 RIC1Q4ADV7 1423 aa24.73■■□□□ 1.55
SNED1-210ENST00000483962 RTL5Q5HYW3 569 aaPredicted RBP24.73■■□□□ 1.55
SNED1-210ENST00000483962 C2CD5Q86YS7 1000 aa24.73■■□□□ 1.55
SNED1-210ENST00000483962 ZBTB38Q8NAP3 1195 aaPredicted RBP24.73■■□□□ 1.55
SNED1-210ENST00000483962 LAMB2P55268 1798 aa24.72■■□□□ 1.55
SNED1-210ENST00000483962 KLRG2A4D1S0 409 aaPredicted RBP24.72■■□□□ 1.55
SNED1-210ENST00000483962 HCLS1P14317 486 aaPredicted RBP24.72■■□□□ 1.55
SNED1-210ENST00000483962 GCKRQ14397 625 aa24.72■■□□□ 1.55
SNED1-210ENST00000483962 ARHGAP45Q92619 1136 aa24.72■■□□□ 1.55
SNED1-210ENST00000483962 PCCAP05165 728 aaPredicted RBP24.71■■□□□ 1.55
SNED1-210ENST00000483962 C3orf67Q6ZVT6 689 aa24.71■■□□□ 1.55
SNED1-210ENST00000483962 FRAT1Q92837 279 aaPredicted RBP24.71■■□□□ 1.55
SNED1-210ENST00000483962 API5Q9BZZ5 524 aaKnown RBP24.71■■□□□ 1.55
SNED1-210ENST00000483962 RCAN3Q9UKA8 241 aa24.71■■□□□ 1.55
SNED1-210ENST00000483962 TNNQ9UQP3 1299 aa24.71■■□□□ 1.55
SNED1-210ENST00000483962 H0YIN7 160 aa24.7■■□□□ 1.54
SNED1-210ENST00000483962 SRCIN1Q9C0H9 1055 aa24.7■■□□□ 1.54
SNED1-210ENST00000483962 WWC3Q9ULE0 1092 aa24.7■■□□□ 1.54
SNED1-210ENST00000483962 H7C1W4 665 aa24.69■■□□□ 1.54
SNED1-210ENST00000483962 IRS4O14654 1257 aaPredicted RBP24.69■■□□□ 1.54
SNED1-210ENST00000483962 IPO8O15397 1037 aaKnown RBP24.69■■□□□ 1.54
SNED1-210ENST00000483962 SRGNP10124 158 aa24.69■■□□□ 1.54
SNED1-210ENST00000483962 PDZRN3Q9UPQ7 1066 aa24.69■■□□□ 1.54
SNED1-210ENST00000483962 ALDH1L1O75891 902 aa24.68■■□□□ 1.54
SNED1-210ENST00000483962 TRIM27P14373 513 aa24.68■■□□□ 1.54
SNED1-210ENST00000483962 CRY2Q49AN0 593 aa24.67■■□□□ 1.54
SNED1-210ENST00000483962 ATF7IPQ6VMQ6 1270 aa24.67■■□□□ 1.54
SNED1-210ENST00000483962 UBE3BQ7Z3V4 1068 aa24.67■■□□□ 1.54
SNED1-210ENST00000483962 NLRP3Q96P20 1036 aa24.67■■□□□ 1.54
SNED1-210ENST00000483962 CDHR2Q9BYE9 1310 aa24.66■■□□□ 1.54
SNED1-210ENST00000483962 CASP7P55210 303 aa24.66■■□□□ 1.54
SNED1-210ENST00000483962 ZNF622Q969S3 477 aaKnown RBP eCLIP24.66■■□□□ 1.54
SNED1-210ENST00000483962 PIM2Q9P1W9 311 aa24.66■■□□□ 1.54
SNED1-210ENST00000483962 CACNA1SQ13698 1873 aa24.66■■□□□ 1.54
SNED1-210ENST00000483962 ABCC4O15439 1325 aa24.65■■□□□ 1.54
SNED1-210ENST00000483962 ZKSCAN2Q63HK3 967 aa24.65■■□□□ 1.54
SNED1-210ENST00000483962 NPR1P16066 1061 aa24.64■■□□□ 1.54
SNED1-210ENST00000483962 STYK1Q6J9G0 422 aa24.64■■□□□ 1.54
SNED1-210ENST00000483962 MASTLQ96GX5 879 aa24.64■■□□□ 1.54
SNED1-210ENST00000483962 GOLGB1Q14789 3259 aaKnown RBP24.63■■□□□ 1.53
SNED1-210ENST00000483962 GRM8O00222 908 aa24.63■■□□□ 1.53
SNED1-210ENST00000483962 YBX3P16989 372 aaKnown RBP eCLIP24.63■■□□□ 1.53
SNED1-210ENST00000483962 CCT4P50991 539 aaKnown RBP24.63■■□□□ 1.53
SNED1-210ENST00000483962 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
SNED1-210ENST00000483962 CLUAP1Q96AJ1 413 aa24.63■■□□□ 1.53
SNED1-210ENST00000483962 MYH3P11055 1940 aa24.63■■□□□ 1.53
SNED1-210ENST00000483962 PDE8AO60658 829 aa24.62■■□□□ 1.53
SNED1-210ENST00000483962 HOXA10P31260 410 aaPredicted RBP24.62■■□□□ 1.53
SNED1-210ENST00000483962 TTLL6Q8N841 843 aa24.62■■□□□ 1.53
SNED1-210ENST00000483962 C9orf78Q9NZ63 289 aaPredicted RBP24.62■■□□□ 1.53
SNED1-210ENST00000483962 SLX4Q8IY92 1834 aa24.62■■□□□ 1.53
SNED1-210ENST00000483962 TAF1P21675 1872 aa24.62■■□□□ 1.53
SNED1-210ENST00000483962 ARFGEF1Q9Y6D6 1849 aa24.61■■□□□ 1.53
SNED1-210ENST00000483962 SF3B3Q15393 1217 aaKnown RBP24.61■■□□□ 1.53
SNED1-210ENST00000483962 DALRD3Q5D0E6 543 aaKnown RBP24.61■■□□□ 1.53
SNED1-210ENST00000483962 INTS3Q68E01 1043 aaKnown RBP24.61■■□□□ 1.53
SNED1-210ENST00000483962 RPGRQ92834 1020 aaKnown RBP24.61■■□□□ 1.53
SNED1-210ENST00000483962 BCS1LQ9Y276 419 aa24.61■■□□□ 1.53
SNED1-210ENST00000483962 HSP90B1P14625 803 aaKnown RBP24.6■■□□□ 1.53
SNED1-210ENST00000483962 GPR162Q16538 588 aa24.6■■□□□ 1.53
SNED1-210ENST00000483962 USP44Q9H0E7 712 aa24.6■■□□□ 1.53
SNED1-210ENST00000483962 UTYO14607 1347 aa24.6■■□□□ 1.53
SNED1-210ENST00000483962 NBPF7P0C2Y1 421 aaPredicted RBP24.59■■□□□ 1.53
SNED1-210ENST00000483962 CNKSR1Q969H4 720 aa24.59■■□□□ 1.53
SNED1-210ENST00000483962 PLA2G12BQ9BX93 195 aa24.59■■□□□ 1.53
SNED1-210ENST00000483962 PLIN1O60240 522 aa24.58■■□□□ 1.53
SNED1-210ENST00000483962 RLBP1P12271 317 aa24.58■■□□□ 1.53
SNED1-210ENST00000483962 RBM17Q96I25 401 aaKnown RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms