RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 TADA3O75528 432 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 GPTP24298 496 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 USP8P40818 1118 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 MTA1Q13330 715 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 AP1ARQ63HQ0 302 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 ERC1Q8IUD2 1116 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 FMNL3Q8IVF7 1028 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 PIK3R5Q8WYR1 880 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 MYBL2P10244 700 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 NEK4P51957 841 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 SNW1Q13573 536 aaKnown RBP9.14□□□□□ -0.95
COL4A5-205ENST00000483338 CCDC158Q5M9N0 1113 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 CCDC26Q8TAB7 109 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 TRIM6Q9C030 488 aaPredicted RBP9.14□□□□□ -0.95
COL4A5-205ENST00000483338 KCND1Q9NSA2 647 aa9.14□□□□□ -0.95
COL4A5-205ENST00000483338 WDR33Q9C0J8 1336 aaKnown RBP9.13□□□□□ -0.95
COL4A5-205ENST00000483338 EIF5P55010 431 aaKnown RBP9.13□□□□□ -0.95
COL4A5-205ENST00000483338 DNAJC14Q6Y2X3 702 aaPredicted RBP9.13□□□□□ -0.95
COL4A5-205ENST00000483338 PHF23Q9BUL5 403 aaPredicted RBP9.13□□□□□ -0.95
COL4A5-205ENST00000483338 TYRO3Q06418 890 aa9.13□□□□□ -0.95
COL4A5-205ENST00000483338 ATF7IPQ6VMQ6 1270 aa9.13□□□□□ -0.95
COL4A5-205ENST00000483338 TRAK1Q9UPV9 953 aa9.13□□□□□ -0.95
COL4A5-205ENST00000483338 REREQ9P2R6 1566 aa9.13□□□□□ -0.95
COL4A5-205ENST00000483338 NEMFO60524 1076 aa9.13□□□□□ -0.95
COL4A5-205ENST00000483338 ANKRD23Q86SG2 305 aa9.13□□□□□ -0.95
COL4A5-205ENST00000483338 INTS4Q96HW7 963 aaKnown RBP9.13□□□□□ -0.95
COL4A5-205ENST00000483338 ABCC1P33527 1531 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 FIBPO43427 364 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 RTN2O75298 545 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 PPFIA4O75335 1185 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 GNAI1P63096 354 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 TMF1P82094 1093 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 CASC1Q6TDU7 716 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 NOL8Q76FK4 1167 aaKnown RBP9.12□□□□□ -0.95
COL4A5-205ENST00000483338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.12□□□□□ -0.956e-6■■■■□ 20.4
COL4A5-205ENST00000483338 ARFGAP3Q9NP61 516 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 PPIP5K1Q6PFW1 1433 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 AP1G2O75843 785 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 CDC25BP30305 580 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 GLI2P10070 1586 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 A2MP01023 1474 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 CCDC69A6NI79 296 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 EXOC5O00471 708 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 FAM163BP0C2L3 166 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 ANO6Q4KMQ2 910 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 WDR63Q8IWG1 891 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 TDRD7Q8NHU6 1098 aaKnown RBP9.12□□□□□ -0.95
COL4A5-205ENST00000483338 GCC1Q96CN9 775 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 PAIP2Q9BPZ3 127 aaKnown RBP9.12□□□□□ -0.95
COL4A5-205ENST00000483338 PDE11AQ9HCR9 933 aa9.12□□□□□ -0.95
COL4A5-205ENST00000483338 DNMT1P26358 1616 aaKnown RBP9.12□□□□□ -0.95
COL4A5-205ENST00000483338 SOS1Q07889 1333 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 EFCAB8A8MWE9 144 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 MAP2K7O14733 419 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 N4BP1O75113 896 aaKnown RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 CEBPAP49715 358 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 ARMC3Q5W041 872 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 ERCC4Q92889 916 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 TEX13AQ9BXU3 409 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 ASXL1Q8IXJ9 1541 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 ARAP3Q8WWN8 1544 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 PRAG1Q86YV5 1406 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 EVCP57679 992 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 E4F1Q66K89 784 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 INTS3Q68E01 1043 aaKnown RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 SH3GL3Q99963 347 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 FAN1Q9Y2M0 1017 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 PRDM15P57071 1507 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 KINO60870 393 aaKnown RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 APOBRQ0VD83 1088 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 CRYMQ14894 314 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 ZKSCAN4Q969J2 545 aaPredicted RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 PPP1R13BQ96KQ4 1090 aa9.11□□□□□ -0.95
COL4A5-205ENST00000483338 CPSF2Q9P2I0 782 aaKnown RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 NOB1Q9ULX3 412 aaKnown RBP9.11□□□□□ -0.95
COL4A5-205ENST00000483338 ANKRD18BA2A2Z9 1011 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 LONRF2Q1L5Z9 754 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 CCDC96Q2M329 555 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 PLEKHM2Q8IWE5 1019 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 TCP11L2Q8N4U5 519 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 SSH1Q8WYL5 1049 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 CLIC6Q96NY7 704 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 PRAM1Q96QH2 718 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 CARD6Q9BX69 1037 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 BICC1Q9H694 974 aaKnown RBP9.1□□□□□ -0.95
COL4A5-205ENST00000483338 SRGAP3O43295 1099 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 NF2P35240 595 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 PSMD2Q13200 908 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 CAMK4Q16566 473 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 TBC1D25Q3MII6 688 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 KLHL23Q8NBE8 558 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 BAG1Q99933 345 aaPredicted RBP9.1□□□□□ -0.95
COL4A5-205ENST00000483338 CD248Q9HCU0 757 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 ATP7AQ04656 1500 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 IQSEC2Q5JU85 1478 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 CHMLP26374 656 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 DDR1Q08345 913 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 USP16Q9Y5T5 823 aa9.1□□□□□ -0.95
COL4A5-205ENST00000483338 SETD1BQ9UPS6 1966 aaKnown RBP9.09□□□□□ -0.95
COL4A5-205ENST00000483338 FANCGO15287 622 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms