RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PNISRQ8TF01 805 aaKnown RBP18.38■□□□□ 0.53
VARS-226ENST00000483275 RPGRQ92834 1020 aaKnown RBP18.38■□□□□ 0.53
VARS-226ENST00000483275 NYXQ9GZU5 481 aa18.38■□□□□ 0.53
VARS-226ENST00000483275 HACL1Q9UJ83 578 aa18.38■□□□□ 0.53
VARS-226ENST00000483275 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
VARS-226ENST00000483275 ALDH1B1P30837 517 aa18.37■□□□□ 0.53
VARS-226ENST00000483275 EPHX2P34913 555 aa18.37■□□□□ 0.53
VARS-226ENST00000483275 PROSER3Q2NL68 480 aa18.37■□□□□ 0.53
VARS-226ENST00000483275 ZNF428Q96B54 188 aa18.37■□□□□ 0.53
VARS-226ENST00000483275 TSPYL4Q9UJ04 414 aa18.37■□□□□ 0.53
VARS-226ENST00000483275 CNTNAP1P78357 1384 aa18.37■□□□□ 0.53
VARS-226ENST00000483275 RIC1Q4ADV7 1423 aa18.37■□□□□ 0.53
VARS-226ENST00000483275 FZD9O00144 591 aa18.36■□□□□ 0.53
VARS-226ENST00000483275 NTSR2O95665 410 aa18.36■□□□□ 0.53
VARS-226ENST00000483275 MAP1SQ66K74 1059 aaPredicted RBP18.36■□□□□ 0.53
VARS-226ENST00000483275 NECTIN2Q92692 538 aa18.36■□□□□ 0.53
VARS-226ENST00000483275 IBTKQ9P2D0 1353 aaPredicted RBP18.36■□□□□ 0.53
VARS-226ENST00000483275 GJA3Q9Y6H8 435 aa18.36■□□□□ 0.53
VARS-226ENST00000483275 ITGBL1O95965 494 aaPredicted RBP18.35■□□□□ 0.53
VARS-226ENST00000483275 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
VARS-226ENST00000483275 PPEF1O14829 653 aaPredicted RBP18.34■□□□□ 0.53
VARS-226ENST00000483275 ZNF34Q8IZ26 560 aa18.34■□□□□ 0.53
VARS-226ENST00000483275 PSMD1Q99460 953 aa18.34■□□□□ 0.53
VARS-226ENST00000483275 FOXN1O15353 648 aa18.33■□□□□ 0.52
VARS-226ENST00000483275 HOXA10P31260 410 aaPredicted RBP18.33■□□□□ 0.52
VARS-226ENST00000483275 VEGFBP49765 207 aa18.33■□□□□ 0.52
VARS-226ENST00000483275 FMR1Q06787 632 aaKnown RBP eCLIP18.33■□□□□ 0.522e-8■■■■■ 34.5
VARS-226ENST00000483275 PDIA6Q15084 440 aa18.33■□□□□ 0.52
VARS-226ENST00000483275 GIGYF2Q6Y7W6 1299 aaKnown RBP18.33■□□□□ 0.52
VARS-226ENST00000483275 LRP10Q7Z4F1 713 aa18.33■□□□□ 0.52
VARS-226ENST00000483275 GPC2Q8N158 579 aa18.33■□□□□ 0.52
VARS-226ENST00000483275 JDP2Q8WYK2 163 aa18.33■□□□□ 0.52
VARS-226ENST00000483275 TMEM88BA6NKF7 163 aa18.32■□□□□ 0.52
VARS-226ENST00000483275 RIPK4P57078 832 aa18.32■□□□□ 0.52
VARS-226ENST00000483275 KRT24Q2M2I5 525 aa18.32■□□□□ 0.52
VARS-226ENST00000483275 LARGE2Q8N3Y3 721 aa18.32■□□□□ 0.52
VARS-226ENST00000483275 CCDC146Q8IYE0 955 aa18.31■□□□□ 0.52
VARS-226ENST00000483275 DDX60Q8IY21 1712 aaKnown RBP18.3■□□□□ 0.52
VARS-226ENST00000483275 EPS15P42566 896 aa18.3■□□□□ 0.52
VARS-226ENST00000483275 EIF6P56537 245 aaKnown RBP18.3■□□□□ 0.52
VARS-226ENST00000483275 AIMP1Q12904 312 aaKnown RBP18.3■□□□□ 0.52
VARS-226ENST00000483275 CNTROBQ8N137 903 aa18.3■□□□□ 0.52
VARS-226ENST00000483275 RBM17Q96I25 401 aaKnown RBP18.3■□□□□ 0.52
VARS-226ENST00000483275 TRPM7Q96QT4 1865 aa18.3■□□□□ 0.52
VARS-226ENST00000483275 ABCC4O15439 1325 aa18.29■□□□□ 0.52
VARS-226ENST00000483275 ERBB4Q15303 1308 aa18.29■□□□□ 0.52
VARS-226ENST00000483275 SCNN1DP51172 638 aa18.29■□□□□ 0.52
VARS-226ENST00000483275 NEUROD2Q15784 382 aa18.29■□□□□ 0.52
VARS-226ENST00000483275 AOC3Q16853 763 aa18.29■□□□□ 0.52
VARS-226ENST00000483275 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
VARS-226ENST00000483275 COL4A1P02462 1669 aa18.28■□□□□ 0.52
VARS-226ENST00000483275 PPIP5K2O43314 1243 aa18.28■□□□□ 0.52
VARS-226ENST00000483275 HCLS1P14317 486 aaPredicted RBP18.28■□□□□ 0.52
VARS-226ENST00000483275 TMPOP42166 694 aaKnown RBP18.28■□□□□ 0.52
VARS-226ENST00000483275 CC2D2BQ6DHV5 1058 aa18.28■□□□□ 0.52
VARS-226ENST00000483275 PPP1R42Q7Z4L9 355 aa18.28■□□□□ 0.52
VARS-226ENST00000483275 PNMA8AQ86V59 439 aaPredicted RBP18.28■□□□□ 0.52
VARS-226ENST00000483275 XAGE3Q8WTP9 111 aa18.28■□□□□ 0.52
VARS-226ENST00000483275 UTP14AQ9BVJ6 771 aaKnown RBP18.28■□□□□ 0.52
VARS-226ENST00000483275 LMOD1P29536 600 aaPredicted RBP18.27■□□□□ 0.52
VARS-226ENST00000483275 PARP10Q53GL7 1025 aa18.27■□□□□ 0.52
VARS-226ENST00000483275 NIM1KQ8IY84 436 aa18.27■□□□□ 0.52
VARS-226ENST00000483275 PNNQ9H307 717 aaKnown RBP18.27■□□□□ 0.52
VARS-226ENST00000483275 ABT1Q9ULW3 272 aaKnown RBP18.27■□□□□ 0.52
VARS-226ENST00000483275 DUOX1Q9NRD9 1551 aa18.26■□□□□ 0.51
VARS-226ENST00000483275 TRAF5O00463 557 aa18.26■□□□□ 0.51
VARS-226ENST00000483275 COPS6Q7L5N1 327 aa18.26■□□□□ 0.51
VARS-226ENST00000483275 NLRP3Q96P20 1036 aa18.26■□□□□ 0.51
VARS-226ENST00000483275 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
VARS-226ENST00000483275 THSD7BQ9C0I4 1608 aa18.25■□□□□ 0.51
VARS-226ENST00000483275 NLRP10Q86W26 655 aa18.25■□□□□ 0.51
VARS-226ENST00000483275 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
VARS-226ENST00000483275 LRRC37AA6NMS7 1700 aa18.25■□□□□ 0.51
VARS-226ENST00000483275 GRM1Q13255 1194 aa18.24■□□□□ 0.51
VARS-226ENST00000483275 AIDAQ96BJ3 306 aa18.24■□□□□ 0.51
VARS-226ENST00000483275 DDX21Q9NR30 783 aaKnown RBP eCLIP18.24■□□□□ 0.51
VARS-226ENST00000483275 RASSF10A6NK89 507 aa18.23■□□□□ 0.51
VARS-226ENST00000483275 PAXIP1Q6ZW49 1069 aaPredicted RBP18.23■□□□□ 0.51
VARS-226ENST00000483275 CHPF2Q9P2E5 772 aa18.23■□□□□ 0.51
VARS-226ENST00000483275 LBX1P52954 281 aa18.22■□□□□ 0.51
VARS-226ENST00000483275 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
VARS-226ENST00000483275 DEFB115Q30KQ5 88 aa18.22■□□□□ 0.51
VARS-226ENST00000483275 SLC10A5Q5PT55 438 aa18.22■□□□□ 0.51
VARS-226ENST00000483275 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
VARS-226ENST00000483275 WDR33Q9C0J8 1336 aaKnown RBP18.22■□□□□ 0.51
VARS-226ENST00000483275 CTCFP49711 727 aaPredicted RBP18.21■□□□□ 0.51
VARS-226ENST00000483275 GMPSP49915 693 aaPredicted RBP18.21■□□□□ 0.51
VARS-226ENST00000483275 CXCL9Q07325 125 aa18.21■□□□□ 0.51
VARS-226ENST00000483275 DDX10Q13206 875 aaKnown RBP18.21■□□□□ 0.51
VARS-226ENST00000483275 RALBP1Q15311 655 aa18.21■□□□□ 0.51
VARS-226ENST00000483275 DPP8Q6V1X1 898 aaPredicted RBP18.21■□□□□ 0.51
VARS-226ENST00000483275 WBP1LQ9NX94 342 aa18.21■□□□□ 0.51
VARS-226ENST00000483275 GPRC5DQ9NZD1 345 aa18.21■□□□□ 0.51
VARS-226ENST00000483275 TRIM35Q9UPQ4 493 aa18.21■□□□□ 0.51
VARS-226ENST00000483275 SHTN1A0MZ66 631 aa18.2■□□□□ 0.5
VARS-226ENST00000483275 RAD17O75943 681 aa18.2■□□□□ 0.5
VARS-226ENST00000483275 GRIPAP1Q4V328 841 aa18.2■□□□□ 0.5
VARS-226ENST00000483275 TMX4Q9H1E5 349 aaPredicted RBP18.2■□□□□ 0.5
VARS-226ENST00000483275 MYBBP1AQ9BQG0 1328 aaKnown RBP18.2■□□□□ 0.5
VARS-226ENST00000483275 TCIRG1Q13488 830 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms