RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 USP17L17D6RBQ6 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L19D6RCP7 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L20D6RJB6 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 PIK3R2O00459 728 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 TYRO3Q06418 890 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 SPEM2Q0P670 501 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 USP17L24Q0WX57 530 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 ELOA3BQ3SY89 546 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 ALYREFQ86V81 257 aaKnown RBP6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 ELOA3Q8NG57 546 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 TRIM11Q96F44 468 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 MDFIQ99750 246 aa6.91□□□□□ -1.3
LAPTM4A-202ENST00000483117 SIN3BO75182 1162 aa6.9□□□□□ -1.3
LAPTM4A-202ENST00000483117 ANKMY2Q8IV38 441 aa6.9□□□□□ -1.3
LAPTM4A-202ENST00000483117 STAG2Q8N3U4 1231 aa6.9□□□□□ -1.3
LAPTM4A-202ENST00000483117 VRTNQ9H8Y1 702 aa6.9□□□□□ -1.3
LAPTM4A-202ENST00000483117 ZNF777Q9ULD5 760 aaPredicted RBP6.9□□□□□ -1.3
LAPTM4A-202ENST00000483117 KCNH4Q9UQ05 1017 aa6.9□□□□□ -1.3
LAPTM4A-202ENST00000483117 FAM196BA6NMK8 535 aa6.89□□□□□ -1.31
LAPTM4A-202ENST00000483117 ALAS2P22557 587 aa6.89□□□□□ -1.31
LAPTM4A-202ENST00000483117 KCNQ4P56696 695 aa6.89□□□□□ -1.31
LAPTM4A-202ENST00000483117 PLVAPQ9BX97 442 aa6.89□□□□□ -1.31
LAPTM4A-202ENST00000483117 NOP53Q9NZM5 478 aaKnown RBP6.89□□□□□ -1.31
LAPTM4A-202ENST00000483117 ADARB2-AS1A8MUL3 147 aa6.88□□□□□ -1.31
LAPTM4A-202ENST00000483117 C1QTNF9BB2RNN3 333 aa6.88□□□□□ -1.31
LAPTM4A-202ENST00000483117 COBLO75128 1261 aa6.88□□□□□ -1.31
LAPTM4A-202ENST00000483117 CHRNA4P43681 627 aa6.88□□□□□ -1.31
LAPTM4A-202ENST00000483117 CDCA8Q53HL2 280 aa6.88□□□□□ -1.31
LAPTM4A-202ENST00000483117 C8orf86Q6ZUL3 223 aa6.88□□□□□ -1.31
LAPTM4A-202ENST00000483117 BTLAQ7Z6A9 289 aa6.88□□□□□ -1.31
LAPTM4A-202ENST00000483117 CD163Q86VB7 1156 aa6.88□□□□□ -1.31
LAPTM4A-202ENST00000483117 TNFRSF25Q93038 417 aa6.88□□□□□ -1.31
LAPTM4A-202ENST00000483117 STARD13Q9Y3M8 1113 aa6.88□□□□□ -1.31
LAPTM4A-202ENST00000483117 ARID1BQ8NFD5 2236 aaPredicted RBP6.87□□□□□ -1.31
LAPTM4A-202ENST00000483117 IGFBP4P22692 258 aa6.87□□□□□ -1.31
LAPTM4A-202ENST00000483117 ADH7P40394 386 aa6.87□□□□□ -1.31
LAPTM4A-202ENST00000483117 CFAP70Q5T0N1 1121 aa6.87□□□□□ -1.31
LAPTM4A-202ENST00000483117 BHMTQ93088 406 aa6.87□□□□□ -1.31
LAPTM4A-202ENST00000483117 ARXQ96QS3 562 aa6.87□□□□□ -1.31
LAPTM4A-202ENST00000483117 M0R082 166 aa6.86□□□□□ -1.31
LAPTM4A-202ENST00000483117 ALBP02768 609 aa6.86□□□□□ -1.31
LAPTM4A-202ENST00000483117 NEUROD1Q13562 356 aa6.86□□□□□ -1.31
LAPTM4A-202ENST00000483117 RTN1Q16799 776 aa6.86□□□□□ -1.31
LAPTM4A-202ENST00000483117 ZNF417Q8TAU3 575 aa6.86□□□□□ -1.31
LAPTM4A-202ENST00000483117 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
LAPTM4A-202ENST00000483117 BCS1LQ9Y276 419 aa6.86□□□□□ -1.31
LAPTM4A-202ENST00000483117 RFX1P22670 979 aa6.85□□□□□ -1.31
LAPTM4A-202ENST00000483117 TBC1D8BQ0IIM8 1120 aa6.85□□□□□ -1.31
LAPTM4A-202ENST00000483117 HIF1AQ16665 826 aa6.85□□□□□ -1.31
LAPTM4A-202ENST00000483117 MICALL1Q8N3F8 863 aa6.85□□□□□ -1.31
LAPTM4A-202ENST00000483117 TGFBR3LH3BV60 316 aa6.84□□□□□ -1.31
LAPTM4A-202ENST00000483117 COL9A3Q14050 684 aaPredicted RBP6.84□□□□□ -1.31
LAPTM4A-202ENST00000483117 ZMYM1Q5SVZ6 1142 aa6.84□□□□□ -1.31
LAPTM4A-202ENST00000483117 IGFLR1Q9H665 355 aa6.84□□□□□ -1.31
LAPTM4A-202ENST00000483117 KLK14Q9P0G3 267 aa6.84□□□□□ -1.31
LAPTM4A-202ENST00000483117 DMGDHQ9UI17 866 aaKnown RBP6.84□□□□□ -1.31
LAPTM4A-202ENST00000483117 FAM229AH3BQW9 127 aa6.83□□□□□ -1.32
LAPTM4A-202ENST00000483117 SPATA31C1P0DKV0 1188 aa6.83□□□□□ -1.32
LAPTM4A-202ENST00000483117 ITGB7P26010 798 aa6.83□□□□□ -1.32
LAPTM4A-202ENST00000483117 WEE1P30291 646 aa6.83□□□□□ -1.32
LAPTM4A-202ENST00000483117 IER5Q5VY09 327 aa6.83□□□□□ -1.32
LAPTM4A-202ENST00000483117 UBE2OQ9C0C9 1292 aaKnown RBP6.83□□□□□ -1.32
LAPTM4A-202ENST00000483117 GRNP28799 593 aaKnown RBP6.82□□□□□ -1.32
LAPTM4A-202ENST00000483117 DGKZQ13574 1117 aa6.82□□□□□ -1.32
LAPTM4A-202ENST00000483117 C20orf204Q6ZNR8 217 aa6.82□□□□□ -1.32
LAPTM4A-202ENST00000483117 FAM200AQ8TCP9 573 aa6.82□□□□□ -1.32
LAPTM4A-202ENST00000483117 GSX2Q9BZM3 304 aa6.82□□□□□ -1.32
LAPTM4A-202ENST00000483117 QTRT2Q9H974 415 aaKnown RBP6.82□□□□□ -1.32
LAPTM4A-202ENST00000483117 NID1P14543 1247 aa6.81□□□□□ -1.32
LAPTM4A-202ENST00000483117 IDH3AP50213 366 aa6.81□□□□□ -1.32
LAPTM4A-202ENST00000483117 PRDM6Q9NQX0 595 aa6.81□□□□□ -1.32
LAPTM4A-202ENST00000483117 SLC6A14Q9UN76 642 aa6.81□□□□□ -1.32
LAPTM4A-202ENST00000483117 SPDYE3A6NKU9 549 aa6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 FOXO3O43524 673 aa6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 NFKB1P19838 968 aa6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 CCINQ13939 588 aa6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 DOC2BQ14184 412 aa6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 PRRT3Q5FWE3 981 aa6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 NUDT8Q8WV74 236 aa6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 VTI1AQ96AJ9 217 aa6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 PNMA5Q96PV4 448 aa6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 NOVA2Q9UNW9 492 aaKnown RBP6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.8□□□□□ -1.32
LAPTM4A-202ENST00000483117 INPP5BP32019 993 aa6.79□□□□□ -1.32
LAPTM4A-202ENST00000483117 KRT25Q7Z3Z0 450 aa6.79□□□□□ -1.32
LAPTM4A-202ENST00000483117 PRIMPOLQ96LW4 560 aa6.79□□□□□ -1.32
LAPTM4A-202ENST00000483117 DNAJB12Q9NXW2 375 aaKnown RBP6.79□□□□□ -1.32
LAPTM4A-202ENST00000483117 LRFN2Q9ULH4 789 aa6.79□□□□□ -1.32
LAPTM4A-202ENST00000483117 LILRB5O75023 590 aa6.78□□□□□ -1.32
LAPTM4A-202ENST00000483117 GATA4P43694 442 aa6.78□□□□□ -1.32
LAPTM4A-202ENST00000483117 TRIM28Q13263 835 aaKnown RBP6.78□□□□□ -1.32
LAPTM4A-202ENST00000483117 GRIK4Q16099 956 aa6.78□□□□□ -1.32
LAPTM4A-202ENST00000483117 MYO19Q96H55 970 aa6.78□□□□□ -1.32
LAPTM4A-202ENST00000483117 JPH1Q9HDC5 661 aaPredicted RBP6.78□□□□□ -1.32
LAPTM4A-202ENST00000483117 NAGPAQ9UK23 515 aa6.78□□□□□ -1.32
LAPTM4A-202ENST00000483117 ZMIZ1Q9ULJ6 1067 aa6.78□□□□□ -1.32
LAPTM4A-202ENST00000483117 USP20Q9Y2K6 914 aa6.78□□□□□ -1.32
LAPTM4A-202ENST00000483117 MICAL2O94851 1124 aa6.77□□□□□ -1.33
LAPTM4A-202ENST00000483117 EPB42P16452 691 aa6.77□□□□□ -1.33
LAPTM4A-202ENST00000483117 ARSDP51689 593 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms