RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
RPGR-208ENST00000482855 NOL10Q9BSC4 688 aaKnown RBP13.05□□□□□ -0.32
RPGR-208ENST00000482855 USP27XA6NNY8 438 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 TULP2O00295 520 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 SLU7O95391 586 aaKnown RBP13.04□□□□□ -0.32
RPGR-208ENST00000482855 NYAP1Q6ZVC0 841 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 DNAJC25Q9H1X3 360 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 CLSTN2Q9H4D0 955 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 PHLPP1O60346 1717 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 ITSN1Q15811 1721 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 EDC4Q6P2E9 1401 aaKnown RBP13.04□□□□□ -0.32
RPGR-208ENST00000482855 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
RPGR-208ENST00000482855 RBM43Q6ZSC3 357 aaKnown RBP13.04□□□□□ -0.32
RPGR-208ENST00000482855 FERMT3Q86UX7 667 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 CNTROBQ8N137 903 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 KIF1BPQ96EK5 621 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 SCAND2PQ9GZW5 306 aaPredicted RBP13.04□□□□□ -0.32
RPGR-208ENST00000482855 ST7Q9NRC1 585 aa13.04□□□□□ -0.32
RPGR-208ENST00000482855 GOLGA6L19H0YKK7 550 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 BMS1Q14692 1282 aaKnown RBP13.03□□□□□ -0.32
RPGR-208ENST00000482855 SULT6B1Q6IMI4 303 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 COG3Q96JB2 828 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 JAKMIP1Q96N16 626 aaKnown RBP13.03□□□□□ -0.32
RPGR-208ENST00000482855 TSPYL1Q9H0U9 437 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 NPHP3Q7Z494 1330 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 TTC21AQ8NDW8 1320 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 METP08581 1390 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 CAVIN2O95810 425 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
RPGR-208ENST00000482855 SPATA32Q96LK8 384 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 LRRFIP2Q9Y608 721 aaKnown RBP13.03□□□□□ -0.32
RPGR-208ENST00000482855 CYP46A1Q9Y6A2 500 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 SKILP12757 684 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 FAM173BQ6P4H8 233 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 CDC37L1Q7L3B6 337 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 STK31Q9BXU1 1019 aa13.03□□□□□ -0.32
RPGR-208ENST00000482855 SOS1Q07889 1333 aaPredicted RBP13.02□□□□□ -0.32
RPGR-208ENST00000482855 ARHGEF10O15013 1369 aa13.02□□□□□ -0.32
RPGR-208ENST00000482855 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
RPGR-208ENST00000482855 CAPN2P17655 700 aa13.02□□□□□ -0.33
RPGR-208ENST00000482855 PDCP20941 246 aa13.02□□□□□ -0.33
RPGR-208ENST00000482855 PI4K2BQ8TCG2 481 aa13.02□□□□□ -0.33
RPGR-208ENST00000482855 KIF2AO00139 706 aaPredicted RBP13.02□□□□□ -0.33
RPGR-208ENST00000482855 CYP2C19P33261 490 aa13.02□□□□□ -0.33
RPGR-208ENST00000482855 ME3Q16798 604 aa13.02□□□□□ -0.33
RPGR-208ENST00000482855 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
RPGR-208ENST00000482855 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.33
RPGR-208ENST00000482855 ZNF446Q9NWS9 450 aa13.02□□□□□ -0.33
RPGR-208ENST00000482855 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.33
RPGR-208ENST00000482855 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
RPGR-208ENST00000482855 ARID5BQ14865 1188 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 SARM1Q6SZW1 724 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 NECAB1Q8N987 351 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 BICD2Q8TD16 824 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 TRMT1Q9NXH9 659 aaKnown RBP13.01□□□□□ -0.33
RPGR-208ENST00000482855 MST1RQ04912 1400 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 NPHP1O15259 732 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 RAB11FIP3O75154 756 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 TM6SF1Q9BZW5 370 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
RPGR-208ENST00000482855 TOPAZ1Q8N9V7 1692 aa13□□□□□ -0.33
RPGR-208ENST00000482855 CRB1P82279 1406 aa13□□□□□ -0.33
RPGR-208ENST00000482855 ERBB3P21860 1342 aa13□□□□□ -0.33
RPGR-208ENST00000482855 CCDC69A6NI79 296 aa13□□□□□ -0.33
RPGR-208ENST00000482855 ADCK5Q3MIX3 580 aa13□□□□□ -0.33
RPGR-208ENST00000482855 CCAR2Q8N163 923 aaKnown RBP13□□□□□ -0.33
RPGR-208ENST00000482855 ANKARQ7Z5J8 1434 aa13□□□□□ -0.33
RPGR-208ENST00000482855 NR1I2O75469 434 aa13□□□□□ -0.33
RPGR-208ENST00000482855 FLIIQ13045 1269 aa13□□□□□ -0.33
RPGR-208ENST00000482855 PRPF40BQ6NWY9 871 aaKnown RBP13□□□□□ -0.33
RPGR-208ENST00000482855 LEO1Q8WVC0 666 aaPredicted RBP13□□□□□ -0.33
RPGR-208ENST00000482855 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
RPGR-208ENST00000482855 TFIP11Q9UBB9 837 aaKnown RBP13□□□□□ -0.33
RPGR-208ENST00000482855 HNRNPH2P55795 449 aaKnown RBP12.99□□□□□ -0.33
RPGR-208ENST00000482855 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
RPGR-208ENST00000482855 GTF3C6Q969F1 213 aa12.99□□□□□ -0.33
RPGR-208ENST00000482855 NRKQ7Z2Y5 1582 aa12.99□□□□□ -0.33
RPGR-208ENST00000482855 TTC21BQ7Z4L5 1316 aa12.99□□□□□ -0.33
RPGR-208ENST00000482855 SURF6O75683 361 aaKnown RBP12.99□□□□□ -0.33
RPGR-208ENST00000482855 UBTFL1P0CB47 393 aaPredicted RBP12.99□□□□□ -0.33
RPGR-208ENST00000482855 H2AFXP16104 143 aaPredicted RBP12.99□□□□□ -0.33
RPGR-208ENST00000482855 EIF4A2Q14240 407 aaKnown RBP12.99□□□□□ -0.33
RPGR-208ENST00000482855 FILIP1Q7Z7B0 1213 aa12.99□□□□□ -0.33
RPGR-208ENST00000482855 TRERF1Q96PN7 1200 aa12.99□□□□□ -0.33
RPGR-208ENST00000482855 CCZ1BP86790 482 aa12.98□□□□□ -0.33
RPGR-208ENST00000482855 CCZ1P86791 482 aaPredicted RBP12.98□□□□□ -0.33
RPGR-208ENST00000482855 CADPS2Q86UW7 1296 aa12.98□□□□□ -0.33
RPGR-208ENST00000482855 RHPN1Q8TCX5 695 aa12.98□□□□□ -0.33
RPGR-208ENST00000482855 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
RPGR-208ENST00000482855 TRIM34Q9BYJ4 488 aa12.98□□□□□ -0.33
RPGR-208ENST00000482855 ZKSCAN1P17029 563 aaPredicted RBP12.98□□□□□ -0.33
RPGR-208ENST00000482855 IQCB1Q15051 598 aa12.98□□□□□ -0.33
RPGR-208ENST00000482855 TPCN1Q9ULQ1 816 aa12.98□□□□□ -0.33
RPGR-208ENST00000482855 ERCC6LQ2NKX8 1250 aa12.98□□□□□ -0.33
RPGR-208ENST00000482855 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.98□□□□□ -0.33
RPGR-208ENST00000482855 AMOTL2Q9Y2J4 779 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms