RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 GPTP24298 496 aa17.02■□□□□ 0.32
TMEM54-206ENST00000482771 LMOD1P29536 600 aaPredicted RBP17.02■□□□□ 0.32
TMEM54-206ENST00000482771 HOXA10P31260 410 aaPredicted RBP17.02■□□□□ 0.32
TMEM54-206ENST00000482771 EPS15P42566 896 aa17.02■□□□□ 0.32
TMEM54-206ENST00000482771 MAP2K1Q02750 393 aaPredicted RBP17.02■□□□□ 0.32
TMEM54-206ENST00000482771 FMR1Q06787 632 aaKnown RBP eCLIP17.02■□□□□ 0.32
TMEM54-206ENST00000482771 SUSD4Q5VX71 490 aa17.02■□□□□ 0.32
TMEM54-206ENST00000482771 LARGE2Q8N3Y3 721 aa17.02■□□□□ 0.32
TMEM54-206ENST00000482771 DDX21Q9NR30 783 aaKnown RBP eCLIP17.02■□□□□ 0.32
TMEM54-206ENST00000482771 BCORQ6W2J9 1755 aa17.02■□□□□ 0.31
TMEM54-206ENST00000482771 MAP3K15Q6ZN16 1313 aa17.01■□□□□ 0.31
TMEM54-206ENST00000482771 HSPA8P11142 646 aaKnown RBP17.01■□□□□ 0.31
TMEM54-206ENST00000482771 MYL6BP14649 208 aa17.01■□□□□ 0.31
TMEM54-206ENST00000482771 KIF6Q6ZMV9 814 aa17.01■□□□□ 0.31
TMEM54-206ENST00000482771 PNISRQ8TF01 805 aaKnown RBP17.01■□□□□ 0.31
TMEM54-206ENST00000482771 RBM17Q96I25 401 aaKnown RBP17.01■□□□□ 0.31
TMEM54-206ENST00000482771 ARFGEF2Q9Y6D5 1785 aa17.01■□□□□ 0.31
TMEM54-206ENST00000482771 EIF4A1P60842 406 aaKnown RBP17■□□□□ 0.31
TMEM54-206ENST00000482771 GRIPAP1Q4V328 841 aa17■□□□□ 0.31
TMEM54-206ENST00000482771 CRAMP1Q96RY5 1269 aa17■□□□□ 0.31
TMEM54-206ENST00000482771 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
TMEM54-206ENST00000482771 ABCC12Q96J65 1359 aa17■□□□□ 0.31
TMEM54-206ENST00000482771 NEFMP07197 916 aa16.99■□□□□ 0.31
TMEM54-206ENST00000482771 PAXIP1Q6ZW49 1069 aaPredicted RBP16.99■□□□□ 0.31
TMEM54-206ENST00000482771 SLC51AQ86UW1 340 aa16.99■□□□□ 0.31
TMEM54-206ENST00000482771 SCNN1DP51172 638 aa16.98■□□□□ 0.31
TMEM54-206ENST00000482771 GRM1Q13255 1194 aa16.98■□□□□ 0.31
TMEM54-206ENST00000482771 ZNF34Q8IZ26 560 aa16.98■□□□□ 0.31
TMEM54-206ENST00000482771 UBN2Q6ZU65 1347 aa16.97■□□□□ 0.31
TMEM54-206ENST00000482771 TRAF5O00463 557 aa16.97■□□□□ 0.31
TMEM54-206ENST00000482771 PPEF1O14829 653 aaPredicted RBP16.97■□□□□ 0.31
TMEM54-206ENST00000482771 CST9Q5W186 159 aa16.97■□□□□ 0.31
TMEM54-206ENST00000482771 C3orf67Q6ZVT6 689 aa16.97■□□□□ 0.31
TMEM54-206ENST00000482771 USP50Q70EL3 339 aaPredicted RBP16.97■□□□□ 0.31
TMEM54-206ENST00000482771 NIM1KQ8IY84 436 aa16.97■□□□□ 0.31
TMEM54-206ENST00000482771 ABHD8Q96I13 439 aa16.97■□□□□ 0.31
TMEM54-206ENST00000482771 CAPNS2Q96L46 248 aa16.97■□□□□ 0.31
TMEM54-206ENST00000482771 GPR101Q96P66 508 aaPredicted RBP16.97■□□□□ 0.31
TMEM54-206ENST00000482771 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
TMEM54-206ENST00000482771 TMX4Q9H1E5 349 aaPredicted RBP16.97■□□□□ 0.31
TMEM54-206ENST00000482771 SNED1Q8TER0 1413 aa16.96■□□□□ 0.31
TMEM54-206ENST00000482771 CYP4F22Q6NT55 531 aa16.96■□□□□ 0.31
TMEM54-206ENST00000482771 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.31
TMEM54-206ENST00000482771 NLRP3Q96P20 1036 aa16.96■□□□□ 0.31
TMEM54-206ENST00000482771 BEGAINQ9BUH8 593 aa16.96■□□□□ 0.31
TMEM54-206ENST00000482771 PPIP5K2O43314 1243 aa16.95■□□□□ 0.3
TMEM54-206ENST00000482771 NTSR2O95665 410 aa16.95■□□□□ 0.3
TMEM54-206ENST00000482771 ECE1P42892 770 aa16.95■□□□□ 0.3
TMEM54-206ENST00000482771 GIGYF2Q6Y7W6 1299 aaKnown RBP16.95■□□□□ 0.3
TMEM54-206ENST00000482771 ADAMTSL1Q8N6G6 1762 aa16.94■□□□□ 0.3
TMEM54-206ENST00000482771 COL4A5P29400 1685 aa16.94■□□□□ 0.3
TMEM54-206ENST00000482771 AOC3Q16853 763 aa16.94■□□□□ 0.3
TMEM54-206ENST00000482771 ATP6V0A2Q9Y487 856 aa16.94■□□□□ 0.3
TMEM54-206ENST00000482771 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
TMEM54-206ENST00000482771 CXCL9Q07325 125 aa16.93■□□□□ 0.3
TMEM54-206ENST00000482771 NFE2L2Q16236 605 aa16.93■□□□□ 0.3
TMEM54-206ENST00000482771 PARP10Q53GL7 1025 aa16.93■□□□□ 0.3
TMEM54-206ENST00000482771 SLC10A5Q5PT55 438 aa16.93■□□□□ 0.3
TMEM54-206ENST00000482771 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
TMEM54-206ENST00000482771 UTP14AQ9BVJ6 771 aaKnown RBP16.93■□□□□ 0.3
TMEM54-206ENST00000482771 VPS33BQ9H267 617 aa16.93■□□□□ 0.3
TMEM54-206ENST00000482771 ADARB2Q9NS39 739 aaKnown RBP16.93■□□□□ 0.3
TMEM54-206ENST00000482771 GPRC5DQ9NZD1 345 aa16.93■□□□□ 0.3
TMEM54-206ENST00000482771 ZNRF3Q9ULT6 936 aa16.92■□□□□ 0.3
TMEM54-206ENST00000482771 TLL2Q9Y6L7 1015 aa16.92■□□□□ 0.3
TMEM54-206ENST00000482771 CCDC85CA6NKD9 419 aa16.91■□□□□ 0.3
TMEM54-206ENST00000482771 AOC2O75106 756 aa16.91■□□□□ 0.3
TMEM54-206ENST00000482771 BBOX1O75936 387 aa16.91■□□□□ 0.3
TMEM54-206ENST00000482771 TSKSQ9UJT2 592 aa16.91■□□□□ 0.3
TMEM54-206ENST00000482771 IBTKQ9P2D0 1353 aaPredicted RBP16.9■□□□□ 0.3
TMEM54-206ENST00000482771 CELF2O95319 508 aaKnown RBP16.9■□□□□ 0.3
TMEM54-206ENST00000482771 MAP2K2P36507 400 aa16.9■□□□□ 0.3
TMEM54-206ENST00000482771 GMPSP49915 693 aaPredicted RBP16.9■□□□□ 0.3
TMEM54-206ENST00000482771 PDIA6Q15084 440 aa16.9■□□□□ 0.3
TMEM54-206ENST00000482771 FAM161AQ3B820 660 aa16.9■□□□□ 0.3
TMEM54-206ENST00000482771 SP8Q8IXZ3 490 aa16.9■□□□□ 0.3
TMEM54-206ENST00000482771 SUPT20HQ8NEM7 779 aa16.9■□□□□ 0.3
TMEM54-206ENST00000482771 NUP98P52948 1817 aa16.9■□□□□ 0.3
TMEM54-206ENST00000482771 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
TMEM54-206ENST00000482771 ANXA1P04083 346 aa16.89■□□□□ 0.29
TMEM54-206ENST00000482771 DPP8Q6V1X1 898 aaPredicted RBP16.89■□□□□ 0.29
TMEM54-206ENST00000482771 SAPCD2Q86UD0 394 aa16.89■□□□□ 0.29
TMEM54-206ENST00000482771 MPNDQ8N594 471 aa16.89■□□□□ 0.29
TMEM54-206ENST00000482771 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.29
TMEM54-206ENST00000482771 GLIS2Q9BZE0 524 aaPredicted RBP16.89■□□□□ 0.29
TMEM54-206ENST00000482771 PNNQ9H307 717 aaKnown RBP16.89■□□□□ 0.29
TMEM54-206ENST00000482771 TSPYL4Q9UJ04 414 aa16.89■□□□□ 0.29
TMEM54-206ENST00000482771 ERBB4Q15303 1308 aa16.89■□□□□ 0.29
TMEM54-206ENST00000482771 RIC1Q4ADV7 1423 aa16.88■□□□□ 0.29
TMEM54-206ENST00000482771 RAD17O75943 681 aa16.88■□□□□ 0.29
TMEM54-206ENST00000482771 HCLS1P14317 486 aaPredicted RBP16.88■□□□□ 0.29
TMEM54-206ENST00000482771 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
TMEM54-206ENST00000482771 CIAPIN1Q6FI81 312 aa16.88■□□□□ 0.29
TMEM54-206ENST00000482771 LRP10Q7Z4F1 713 aa16.88■□□□□ 0.29
TMEM54-206ENST00000482771 BCL2L13Q9BXK5 485 aa16.88■□□□□ 0.29
TMEM54-206ENST00000482771 PGAP2Q9UHJ9 254 aa16.88■□□□□ 0.29
TMEM54-206ENST00000482771 ABCC4O15439 1325 aa16.88■□□□□ 0.29
TMEM54-206ENST00000482771 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
TMEM54-206ENST00000482771 AIMP1Q12904 312 aaKnown RBP16.87■□□□□ 0.29
TMEM54-206ENST00000482771 TNIP1Q15025 636 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms