RNA–Protein interactions for RNA: ENST00000482702.5

CALB1-205, Transcript of calbindin 1, human

TSL 3

Gene CALB1, Length 826 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALB1-205	ENST00000482702	PNMA8A	Q86V59	439 aa	Predicted RBP	13.32	□□□□□ -0.28
CALB1-205	ENST00000482702	ZNF34	Q8IZ26	560 aa		13.32	□□□□□ -0.28
CALB1-205	ENST00000482702	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.32	□□□□□ -0.28
CALB1-205	ENST00000482702	NLRP3	Q96P20	1036 aa		13.32	□□□□□ -0.28
CALB1-205	ENST00000482702	CRAMP1	Q96RY5	1269 aa		13.32	□□□□□ -0.28
CALB1-205	ENST00000482702	CREBZF	Q9NS37	354 aa		13.32	□□□□□ -0.28
CALB1-205	ENST00000482702	HACL1	Q9UJ83	578 aa		13.32	□□□□□ -0.28
CALB1-205	ENST00000482702	ANKRD36C	Q5JPF3	1778 aa		13.32	□□□□□ -0.28
CALB1-205	ENST00000482702	EIF6	P56537	245 aa	Known RBP	13.31	□□□□□ -0.28
CALB1-205	ENST00000482702	GPC2	Q8N158	579 aa		13.31	□□□□□ -0.28
CALB1-205	ENST00000482702	SYNE4	Q8N205	404 aa		13.31	□□□□□ -0.28
CALB1-205	ENST00000482702	UTP14A	Q9BVJ6	771 aa	Known RBP	13.31	□□□□□ -0.28
CALB1-205	ENST00000482702	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.31	□□□□□ -0.28
CALB1-205	ENST00000482702	UBN2	Q6ZU65	1347 aa		13.31	□□□□□ -0.28
CALB1-205	ENST00000482702	PPEF1	O14829	653 aa	Predicted RBP	13.3	□□□□□ -0.28
CALB1-205	ENST00000482702	NTSR2	O95665	410 aa		13.3	□□□□□ -0.28
CALB1-205	ENST00000482702	LMOD1	P29536	600 aa	Predicted RBP	13.3	□□□□□ -0.28
CALB1-205	ENST00000482702	DDX10	Q13206	875 aa	Known RBP	13.3	□□□□□ -0.28
CALB1-205	ENST00000482702	EAPP	Q56P03	285 aa	Predicted RBP	13.3	□□□□□ -0.28
CALB1-205	ENST00000482702	SUSD4	Q5VX71	490 aa		13.3	□□□□□ -0.28
CALB1-205	ENST00000482702	RUNDC1	Q96C34	613 aa		13.3	□□□□□ -0.28
CALB1-205	ENST00000482702	PCNT	O95613	3336 aa		13.29	□□□□□ -0.28
CALB1-205	ENST00000482702	FZD9	O00144	591 aa		13.29	□□□□□ -0.28
CALB1-205	ENST00000482702	HOXB7	P09629	217 aa		13.29	□□□□□ -0.28
CALB1-205	ENST00000482702	EPHX2	P34913	555 aa		13.29	□□□□□ -0.28
CALB1-205	ENST00000482702	NEUROD2	Q15784	382 aa		13.29	□□□□□ -0.28
CALB1-205	ENST00000482702	LARGE2	Q8N3Y3	721 aa		13.29	□□□□□ -0.28
CALB1-205	ENST00000482702	CLEC11A	Q9Y240	323 aa		13.29	□□□□□ -0.28
CALB1-205	ENST00000482702	ZNF541	Q9H0D2	1346 aa		13.29	□□□□□ -0.28
CALB1-205	ENST00000482702	OLFM4	Q6UX06	510 aa		13.28	□□□□□ -0.28
CALB1-205	ENST00000482702	SUPT20H	Q8NEM7	779 aa		13.28	□□□□□ -0.28
CALB1-205	ENST00000482702	VPS33B	Q9H267	617 aa		13.28	□□□□□ -0.28
CALB1-205	ENST00000482702	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
CALB1-205	ENST00000482702	CALD1	Q05682	793 aa	Known RBP	13.27	□□□□□ -0.29
CALB1-205	ENST00000482702	AIMP1	Q12904	312 aa	Known RBP	13.27	□□□□□ -0.29
CALB1-205	ENST00000482702	PDIA6	Q15084	440 aa		13.27	□□□□□ -0.29
CALB1-205	ENST00000482702	SLC10A5	Q5PT55	438 aa		13.27	□□□□□ -0.29
CALB1-205	ENST00000482702	COPS6	Q7L5N1	327 aa		13.27	□□□□□ -0.29
CALB1-205	ENST00000482702	NIM1K	Q8IY84	436 aa		13.27	□□□□□ -0.29
CALB1-205	ENST00000482702	CCDC146	Q8IYE0	955 aa		13.27	□□□□□ -0.29
CALB1-205	ENST00000482702	CHMP4A	Q9BY43	222 aa		13.27	□□□□□ -0.29
CALB1-205	ENST00000482702	LAS1L	Q9Y4W2	734 aa	Known RBP	13.27	□□□□□ -0.29
CALB1-205	ENST00000482702	SNED1	Q8TER0	1413 aa		13.27	□□□□□ -0.29
CALB1-205	ENST00000482702	CHL1	O00533	1208 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	BBOX1	O75936	387 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	POTEI	P0CG38	1075 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	POTEJ	P0CG39	1038 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	HDGFL1	Q5TGJ6	251 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	DDX46	Q7L014	1031 aa	Known RBP	13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	TMC4	Q7Z404	712 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	LRP10	Q7Z4F1	713 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	SH3TC1	Q8TE82	1336 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	XAGE3	Q8WTP9	111 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	DBF4	Q9UBU7	674 aa	Predicted RBP	13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	TRMT112	Q9UI30	125 aa	Known RBP	13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	ATP6V0A2	Q9Y487	856 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	GJA3	Q9Y6H8	435 aa		13.26	□□□□□ -0.29
CALB1-205	ENST00000482702	PASK	Q96RG2	1323 aa		13.25	□□□□□ -0.29
CALB1-205	ENST00000482702	TMEM88B	A6NKF7	163 aa		13.25	□□□□□ -0.29
CALB1-205	ENST00000482702	TCERG1	O14776	1098 aa	Known RBP	13.25	□□□□□ -0.29
CALB1-205	ENST00000482702	PPIP5K2	O43314	1243 aa		13.25	□□□□□ -0.29
CALB1-205	ENST00000482702	HSPA1A	P0DMV8	641 aa	Known RBP	13.25	□□□□□ -0.29
CALB1-205	ENST00000482702	HSPA1B	P0DMV9	641 aa	Known RBP	13.25	□□□□□ -0.29
CALB1-205	ENST00000482702	TCIRG1	Q13488	830 aa		13.25	□□□□□ -0.29
CALB1-205	ENST00000482702	PROSER3	Q2NL68	480 aa		13.25	□□□□□ -0.29
CALB1-205	ENST00000482702	NLRP10	Q86W26	655 aa		13.25	□□□□□ -0.29
CALB1-205	ENST00000482702	NECTIN2	Q92692	538 aa		13.25	□□□□□ -0.29
CALB1-205	ENST00000482702	ABCC4	O15439	1325 aa		13.24	□□□□□ -0.29
CALB1-205	ENST00000482702	ANXA1	P04083	346 aa		13.24	□□□□□ -0.29
CALB1-205	ENST00000482702	HSP90B1	P14625	803 aa	Known RBP	13.24	□□□□□ -0.29
CALB1-205	ENST00000482702	DPP8	Q6V1X1	898 aa	Predicted RBP	13.24	□□□□□ -0.29
CALB1-205	ENST00000482702	CFAP44	Q96MT7	982 aa		13.24	□□□□□ -0.29
CALB1-205	ENST00000482702	HYPK	Q9NX55	129 aa		13.24	□□□□□ -0.29
CALB1-205	ENST00000482702	CHPF2	Q9P2E5	772 aa		13.24	□□□□□ -0.29
CALB1-205	ENST00000482702	MKRN1	Q9UHC7	482 aa	Known RBP	13.24	□□□□□ -0.29
CALB1-205	ENST00000482702	ADAMTSL1	Q8N6G6	1762 aa		13.24	□□□□□ -0.29
CALB1-205	ENST00000482702	CNTNAP1	P78357	1384 aa		13.23	□□□□□ -0.29
CALB1-205	ENST00000482702	LAMB2	P55268	1798 aa		13.23	□□□□□ -0.29
CALB1-205	ENST00000482702	TNS4	Q8IZW8	715 aa		13.23	□□□□□ -0.29
CALB1-205	ENST00000482702	PLBD2	Q8NHP8	589 aa		13.23	□□□□□ -0.29
CALB1-205	ENST00000482702	AIDA	Q96BJ3	306 aa		13.23	□□□□□ -0.29
CALB1-205	ENST00000482702	ADAMTS8	Q9UP79	889 aa		13.23	□□□□□ -0.29
CALB1-205	ENST00000482702	CDHR2	Q9BYE9	1310 aa		13.22	□□□□□ -0.29
CALB1-205	ENST00000482702	GRAP	Q13588	217 aa		13.22	□□□□□ -0.29
CALB1-205	ENST00000482702	ANKRD13D	Q6ZTN6	518 aa		13.22	□□□□□ -0.29
CALB1-205	ENST00000482702	USP50	Q70EL3	339 aa	Predicted RBP	13.22	□□□□□ -0.29
CALB1-205	ENST00000482702	SP8	Q8IXZ3	490 aa		13.22	□□□□□ -0.29
CALB1-205	ENST00000482702	CNTROB	Q8N137	903 aa		13.22	□□□□□ -0.29
CALB1-205	ENST00000482702	MPND	Q8N594	471 aa		13.22	□□□□□ -0.29
CALB1-205	ENST00000482702	GRAPL	Q8TC17	118 aa	Predicted RBP	13.22	□□□□□ -0.29
CALB1-205	ENST00000482702	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.22	□□□□□ -0.29
CALB1-205	ENST00000482702	TRIM35	Q9UPQ4	493 aa		13.22	□□□□□ -0.29
CALB1-205	ENST00000482702	ITGBL1	O95965	494 aa	Predicted RBP	13.21	□□□□□ -0.29
CALB1-205	ENST00000482702	HCLS1	P14317	486 aa	Predicted RBP	13.21	□□□□□ -0.29
CALB1-205	ENST00000482702	GNAI1	P63096	354 aa		13.21	□□□□□ -0.29
CALB1-205	ENST00000482702	GOLGA2	Q08379	1002 aa		13.21	□□□□□ -0.29
CALB1-205	ENST00000482702	AOC3	Q16853	763 aa		13.21	□□□□□ -0.29
CALB1-205	ENST00000482702	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.21	□□□□□ -0.29
CALB1-205	ENST00000482702	C3orf67	Q6ZVT6	689 aa		13.21	□□□□□ -0.29
CALB1-205	ENST00000482702	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms