RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 FAM196BA6NMK8 535 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 MAP4K4O95819 1239 aaPredicted RBP4.74□□□□□ -1.65
SMC6-208ENST00000481708 RETREG3Q86VR2 466 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 TOGARAM1Q9Y4F4 1720 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 BIN2Q9UBW5 565 aaPredicted RBP4.73□□□□□ -1.65
SMC6-208ENST00000481708 SLIT2O94813 1529 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 MYOM3Q5VTT5 1437 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 H3BRB1 525 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 FBXO45P0C2W1 286 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 ATP2B4P23634 1241 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 SLC4A3P48751 1232 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 FANCCQ00597 558 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 NT5DC4Q86YG4 428 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 ACBD3Q9H3P7 528 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 TUT1Q9H6E5 874 aaKnown RBP4.73□□□□□ -1.65
SMC6-208ENST00000481708 DMGDHQ9UI17 866 aaKnown RBP4.73□□□□□ -1.65
SMC6-208ENST00000481708 DAPK1P53355 1430 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 NRXN2Q9P2S2 1712 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 USP17L5A8MUK1 530 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 SF3A1Q15459 793 aaKnown RBP4.73□□□□□ -1.65
SMC6-208ENST00000481708 KMT5BQ4FZB7 885 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 THAP11Q96EK4 314 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 PRM3Q9NNZ6 103 aa4.73□□□□□ -1.65
SMC6-208ENST00000481708 COL5A3P25940 1745 aaPredicted RBP4.73□□□□□ -1.65
SMC6-208ENST00000481708 SOWAHBA6NEL2 793 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 IGHA2P01877 340 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 ASB16Q96NS5 453 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 VIRMAQ69YN4 1812 aaKnown RBP4.72□□□□□ -1.65
SMC6-208ENST00000481708 DESI1Q6ICB0 168 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 BRICD5Q6PL45 260 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 SCUBE3Q8IX30 993 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 OCSTAMPQ9BR26 566 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 SEPT3Q9UH03 358 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 CBLBQ13191 982 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 NCOA4Q13772 614 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 LYPD8Q6UX82 237 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 PRKAG2Q9UGJ0 569 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 HPS5Q9UPZ3 1129 aa4.72□□□□□ -1.65
SMC6-208ENST00000481708 MTUS2Q5JR59 1369 aa4.71□□□□□ -1.65
SMC6-208ENST00000481708 RALGAPBQ86X10 1494 aa4.71□□□□□ -1.65
SMC6-208ENST00000481708 MAP2P11137 1827 aaKnown RBP4.71□□□□□ -1.66
SMC6-208ENST00000481708 ANKRD13DQ6ZTN6 518 aa4.71□□□□□ -1.66
SMC6-208ENST00000481708 TANGO6Q9C0B7 1094 aa4.71□□□□□ -1.66
SMC6-208ENST00000481708 PRMT3O60678 531 aa4.71□□□□□ -1.66
SMC6-208ENST00000481708 SDE2Q6IQ49 451 aa4.71□□□□□ -1.66
SMC6-208ENST00000481708 TICAM2Q86XR7 235 aa4.71□□□□□ -1.66
SMC6-208ENST00000481708 DNMT3AQ9Y6K1 912 aaPredicted RBP4.71□□□□□ -1.66
SMC6-208ENST00000481708 USB1Q9BQ65 265 aaKnown RBP4.71□□□□□ -1.66
SMC6-208ENST00000481708 MKRN1Q9UHC7 482 aaKnown RBP4.71□□□□□ -1.66
SMC6-208ENST00000481708 F12P00748 615 aaPredicted RBP4.7□□□□□ -1.66
SMC6-208ENST00000481708 SEMA3FQ13275 785 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 TAF7LQ5H9L4 462 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 PSMD1Q99460 953 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 WBP1LQ9NX94 342 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 MAP10Q9P2G4 905 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 ANKK1Q8NFD2 765 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 ICMTO60725 284 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 PEX14O75381 377 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 PPP4CP60510 307 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 Q3C1V9 767 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 ZNF326Q5BKZ1 582 aaKnown RBP4.7□□□□□ -1.66
SMC6-208ENST00000481708 TAS1R3Q7RTX0 852 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 NOP9Q86U38 636 aaKnown RBP4.7□□□□□ -1.66
SMC6-208ENST00000481708 KRTAP3-3Q9BYR6 98 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 KRTAP3-2Q9BYR7 98 aa4.7□□□□□ -1.66
SMC6-208ENST00000481708 CUEDC1Q9NWM3 386 aaPredicted RBP4.7□□□□□ -1.66
SMC6-208ENST00000481708 SALL2Q9Y467 1007 aaPredicted RBP4.7□□□□□ -1.66
SMC6-208ENST00000481708 MRPL42Q9Y6G3 142 aaKnown RBP4.7□□□□□ -1.66
SMC6-208ENST00000481708 ZNF646O15015 1829 aaPredicted RBP4.69□□□□□ -1.66
SMC6-208ENST00000481708 TNRQ92752 1358 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 CHD4Q14839 1912 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 NCLP19338 710 aaKnown RBP4.69□□□□□ -1.66
SMC6-208ENST00000481708 MAPK1P28482 360 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 SGSM3Q96HU1 749 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 TSR3Q9UJK0 312 aaKnown RBP4.69□□□□□ -1.66
SMC6-208ENST00000481708 ABL1P00519 1130 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 DPYDQ12882 1025 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 PLEKHM2Q8IWE5 1019 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 WNT2BQ93097 391 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 PRDM9Q9NQV7 894 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 TMEM2Q9UHN6 1383 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 RACK1P63244 317 aaKnown RBP4.69□□□□□ -1.66
SMC6-208ENST00000481708 B4GALNT3Q6L9W6 998 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 KCNB2Q92953 911 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 PCDHB3Q9Y5E6 796 aa4.69□□□□□ -1.66
SMC6-208ENST00000481708 SCAMP3O14828 347 aaKnown RBP4.68□□□□□ -1.66
SMC6-208ENST00000481708 EXOC8Q8IYI6 725 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 FAM160A2Q8N612 972 aaPredicted RBP4.68□□□□□ -1.66
SMC6-208ENST00000481708 PRIMPOLQ96LW4 560 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 PLEKHD1A6NEE1 506 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 GTF2F1P35269 517 aaKnown RBP eCLIP4.68□□□□□ -1.66
SMC6-208ENST00000481708 TMC7Q7Z402 723 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 C1orf216Q8TAB5 229 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 ZNF594Q96JF6 807 aaPredicted RBP4.68□□□□□ -1.66
SMC6-208ENST00000481708 GMLQ99445 158 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 WWC3Q9ULE0 1092 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 RRBP1Q9P2E9 1410 aaKnown RBP4.68□□□□□ -1.66
SMC6-208ENST00000481708 ARFGEF1Q9Y6D6 1849 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 TPD52L2O43399 206 aaKnown RBP4.68□□□□□ -1.66
SMC6-208ENST00000481708 ZNF746Q6NUN9 644 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms