RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 DDX21Q9NR30 783 aaKnown RBP eCLIP28.93■■■□□ 2.22
GPCPD1-206ENST00000481690 CHPF2Q9P2E5 772 aa28.93■■■□□ 2.22
GPCPD1-206ENST00000481690 CEP350Q5VT06 3117 aa28.93■■■□□ 2.22
GPCPD1-206ENST00000481690 FKBP4Q02790 459 aaKnown RBP eCLIP28.92■■■□□ 2.22
GPCPD1-206ENST00000481690 RTKN2Q8IZC4 609 aa28.91■■■□□ 2.22
GPCPD1-206ENST00000481690 UTP14AQ9BVJ6 771 aaKnown RBP28.91■■■□□ 2.22
GPCPD1-206ENST00000481690 SMC1BQ8NDV3 1235 aa28.9■■■□□ 2.22
GPCPD1-206ENST00000481690 ZNF277Q9NRM2 450 aaPredicted RBP28.9■■■□□ 2.22
GPCPD1-206ENST00000481690 MBIPQ9NS73 344 aa28.9■■■□□ 2.22
GPCPD1-206ENST00000481690 LAMB2P55268 1798 aa28.9■■■□□ 2.22
GPCPD1-206ENST00000481690 HOXB7P09629 217 aa28.89■■■□□ 2.22
GPCPD1-206ENST00000481690 HSP90AB3PQ58FF7 597 aa28.89■■■□□ 2.22
GPCPD1-206ENST00000481690 RBM17Q96I25 401 aaKnown RBP28.88■■■□□ 2.21
GPCPD1-206ENST00000481690 DDNO94850 711 aaPredicted RBP28.87■■■□□ 2.21
GPCPD1-206ENST00000481690 DUSP27Q5VZP5 1158 aa28.87■■■□□ 2.21
GPCPD1-206ENST00000481690 C3orf67Q6ZVT6 689 aa28.87■■■□□ 2.21
GPCPD1-206ENST00000481690 POTECB2RU33 542 aa28.86■■■□□ 2.21
GPCPD1-206ENST00000481690 HOXA10P31260 410 aaPredicted RBP28.86■■■□□ 2.21
GPCPD1-206ENST00000481690 CALD1Q05682 793 aaKnown RBP28.86■■■□□ 2.21
GPCPD1-206ENST00000481690 NLRP3Q96P20 1036 aa28.86■■■□□ 2.21
GPCPD1-206ENST00000481690 DBF4Q9UBU7 674 aaPredicted RBP28.86■■■□□ 2.21
GPCPD1-206ENST00000481690 CCDC184Q52MB2 194 aa28.85■■■□□ 2.21
GPCPD1-206ENST00000481690 SYNE4Q8N205 404 aa28.85■■■□□ 2.21
GPCPD1-206ENST00000481690 IFT57Q9NWB7 429 aa28.85■■■□□ 2.21
GPCPD1-206ENST00000481690 TCERG1O14776 1098 aaKnown RBP28.84■■■□□ 2.21
GPCPD1-206ENST00000481690 ZNF853P0CG23 659 aa28.84■■■□□ 2.21
GPCPD1-206ENST00000481690 TCIRG1Q13488 830 aa28.84■■■□□ 2.21
GPCPD1-206ENST00000481690 NLRP10Q86W26 655 aa28.84■■■□□ 2.21
GPCPD1-206ENST00000481690 PPEF1O14829 653 aaPredicted RBP28.83■■■□□ 2.21
GPCPD1-206ENST00000481690 IARSP41252 1262 aaKnown RBP28.83■■■□□ 2.21
GPCPD1-206ENST00000481690 GNAI1P63096 354 aa28.83■■■□□ 2.21
GPCPD1-206ENST00000481690 ZNF428Q96B54 188 aa28.83■■■□□ 2.21
GPCPD1-206ENST00000481690 CRAMP1Q96RY5 1269 aa28.83■■■□□ 2.21
GPCPD1-206ENST00000481690 RNF123Q5XPI4 1314 aa28.83■■■□□ 2.21
GPCPD1-206ENST00000481690 HTRA3P83110 453 aa28.82■■■□□ 2.2
GPCPD1-206ENST00000481690 CC2D2BQ6DHV5 1058 aa28.82■■■□□ 2.2
GPCPD1-206ENST00000481690 TRMT112Q9UI30 125 aaKnown RBP28.82■■■□□ 2.2
GPCPD1-206ENST00000481690 SNED1Q8TER0 1413 aa28.82■■■□□ 2.2
GPCPD1-206ENST00000481690 SCN4AP35499 1836 aa28.81■■■□□ 2.2
GPCPD1-206ENST00000481690 ZNF541Q9H0D2 1346 aa28.81■■■□□ 2.2
GPCPD1-206ENST00000481690 SLC10A5Q5PT55 438 aa28.81■■■□□ 2.2
GPCPD1-206ENST00000481690 PLBD2Q8NHP8 589 aa28.81■■■□□ 2.2
GPCPD1-206ENST00000481690 ELL2O00472 640 aaPredicted RBP28.8■■■□□ 2.2
GPCPD1-206ENST00000481690 HCLS1P14317 486 aaPredicted RBP28.8■■■□□ 2.2
GPCPD1-206ENST00000481690 ANKRD13DQ6ZTN6 518 aa28.8■■■□□ 2.2
GPCPD1-206ENST00000481690 SLC51AQ86UW1 340 aa28.8■■■□□ 2.2
GPCPD1-206ENST00000481690 PSMD1Q99460 953 aa28.8■■■□□ 2.2
GPCPD1-206ENST00000481690 HYPKQ9NX55 129 aa28.8■■■□□ 2.2
GPCPD1-206ENST00000481690 SH3TC1Q8TE82 1336 aa28.79■■■□□ 2.2
GPCPD1-206ENST00000481690 ZNF316A6NFI3 1004 aaPredicted RBP28.79■■■□□ 2.2
GPCPD1-206ENST00000481690 DDX60Q8IY21 1712 aaKnown RBP28.79■■■□□ 2.2
GPCPD1-206ENST00000481690 ABCC4O15439 1325 aa28.78■■■□□ 2.2
GPCPD1-206ENST00000481690 TAF1P21675 1872 aa28.78■■■□□ 2.2
GPCPD1-206ENST00000481690 TMX4Q9H1E5 349 aaPredicted RBP28.77■■■□□ 2.2
GPCPD1-206ENST00000481690 IQCA1LA6NCM1 817 aa28.76■■■□□ 2.19
GPCPD1-206ENST00000481690 DNAJC5GQ8N7S2 189 aa28.76■■■□□ 2.19
GPCPD1-206ENST00000481690 JDP2Q8WYK2 163 aa28.76■■■□□ 2.19
GPCPD1-206ENST00000481690 ATP5J2-PTCD1G3V325 749 aa28.75■■■□□ 2.19
GPCPD1-206ENST00000481690 ANP32CO43423 234 aa28.75■■■□□ 2.19
GPCPD1-206ENST00000481690 GRIPAP1Q4V328 841 aa28.75■■■□□ 2.19
GPCPD1-206ENST00000481690 L3MBTL3Q96JM7 780 aaPredicted RBP28.75■■■□□ 2.19
GPCPD1-206ENST00000481690 COL4A5P29400 1685 aa28.74■■■□□ 2.19
GPCPD1-206ENST00000481690 MRS2Q9HD23 443 aa28.74■■■□□ 2.19
GPCPD1-206ENST00000481690 FZD9O00144 591 aa28.73■■■□□ 2.19
GPCPD1-206ENST00000481690 GOLGA2Q08379 1002 aa28.73■■■□□ 2.19
GPCPD1-206ENST00000481690 LARGE2Q8N3Y3 721 aa28.73■■■□□ 2.19
GPCPD1-206ENST00000481690 C8orf58Q8NAV2 365 aa28.73■■■□□ 2.19
GPCPD1-206ENST00000481690 ISCA1Q9BUE6 129 aa28.73■■■□□ 2.19
GPCPD1-206ENST00000481690 POTEIP0CG38 1075 aa28.72■■■□□ 2.19
GPCPD1-206ENST00000481690 POTEJP0CG39 1038 aa28.72■■■□□ 2.19
GPCPD1-206ENST00000481690 CHADLQ6NUI6 762 aa28.72■■■□□ 2.19
GPCPD1-206ENST00000481690 DDX46Q7L014 1031 aaKnown RBP28.72■■■□□ 2.19
GPCPD1-206ENST00000481690 RIC3Q7Z5B4 369 aa28.72■■■□□ 2.19
GPCPD1-206ENST00000481690 PHAXQ9H814 394 aaKnown RBP28.72■■■□□ 2.19
GPCPD1-206ENST00000481690 ATP6V0A2Q9Y487 856 aa28.72■■■□□ 2.19
GPCPD1-206ENST00000481690 EIF6P56537 245 aaKnown RBP28.7■■■□□ 2.18
GPCPD1-206ENST00000481690 TSR2Q969E8 191 aaKnown RBP28.7■■■□□ 2.18
GPCPD1-206ENST00000481690 FAM89AQ96GI7 184 aa28.7■■■□□ 2.18
GPCPD1-206ENST00000481690 TAF1DQ9H5J8 278 aaPredicted RBP28.7■■■□□ 2.18
GPCPD1-206ENST00000481690 RTL5Q5HYW3 569 aaPredicted RBP28.69■■■□□ 2.18
GPCPD1-206ENST00000481690 KLRG1Q96E93 195 aa28.69■■■□□ 2.18
GPCPD1-206ENST00000481690 HACL1Q9UJ83 578 aa28.69■■■□□ 2.18
GPCPD1-206ENST00000481690 PPIP5K2O43314 1243 aa28.68■■■□□ 2.18
GPCPD1-206ENST00000481690 BBOX1O75936 387 aa28.68■■■□□ 2.18
GPCPD1-206ENST00000481690 GRAPQ13588 217 aa28.68■■■□□ 2.18
GPCPD1-206ENST00000481690 EAPPQ56P03 285 aaPredicted RBP28.68■■■□□ 2.18
GPCPD1-206ENST00000481690 GPC2Q8N158 579 aa28.68■■■□□ 2.18
GPCPD1-206ENST00000481690 GRAPLQ8TC17 118 aaPredicted RBP28.68■■■□□ 2.18
GPCPD1-206ENST00000481690 GJA3Q9Y6H8 435 aa28.68■■■□□ 2.18
GPCPD1-206ENST00000481690 CCDC30Q5VVM6 783 aa28.67■■■□□ 2.18
GPCPD1-206ENST00000481690 NIM1KQ8IY84 436 aa28.67■■■□□ 2.18
GPCPD1-206ENST00000481690 TSPYL6Q8N831 410 aa28.67■■■□□ 2.18
GPCPD1-206ENST00000481690 AOC3Q16853 763 aa28.66■■■□□ 2.18
GPCPD1-206ENST00000481690 CCDC27Q2M243 656 aa28.66■■■□□ 2.18
GPCPD1-206ENST00000481690 DPP8Q6V1X1 898 aaPredicted RBP28.66■■■□□ 2.18
GPCPD1-206ENST00000481690 LDHDQ86WU2 507 aa28.66■■■□□ 2.18
GPCPD1-206ENST00000481690 EPHX2P34913 555 aa28.65■■■□□ 2.18
GPCPD1-206ENST00000481690 WWC1Q8IX03 1113 aa28.65■■■□□ 2.18
GPCPD1-206ENST00000481690 SP8Q8IXZ3 490 aa28.65■■■□□ 2.18
GPCPD1-206ENST00000481690 SUPT20HQ8NEM7 779 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms