RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 GPC2Q8N158 579 aa12.02□□□□□ -0.49
CLIP4-210ENST00000481628 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
CLIP4-210ENST00000481628 CRAMP1Q96RY5 1269 aa12.02□□□□□ -0.49
CLIP4-210ENST00000481628 HACL1Q9UJ83 578 aa12.02□□□□□ -0.49
CLIP4-210ENST00000481628 RRP7AQ9Y3A4 280 aaKnown RBP12.02□□□□□ -0.49
CLIP4-210ENST00000481628 RNF123Q5XPI4 1314 aa12.02□□□□□ -0.49
CLIP4-210ENST00000481628 ANKRD36CQ5JPF3 1778 aa12.02□□□□□ -0.49
CLIP4-210ENST00000481628 PCNTO95613 3336 aa12.01□□□□□ -0.49
CLIP4-210ENST00000481628 LTBP1Q14766 1721 aa12.01□□□□□ -0.49
CLIP4-210ENST00000481628 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
CLIP4-210ENST00000481628 MYL6BP14649 208 aa12.01□□□□□ -0.49
CLIP4-210ENST00000481628 RALBP1Q15311 655 aa12.01□□□□□ -0.49
CLIP4-210ENST00000481628 ZBTB3Q9H5J0 574 aa12.01□□□□□ -0.49
CLIP4-210ENST00000481628 TSPYL4Q9UJ04 414 aa12.01□□□□□ -0.49
CLIP4-210ENST00000481628 GPTP24298 496 aa12□□□□□ -0.49
CLIP4-210ENST00000481628 EPHX2P34913 555 aa12□□□□□ -0.49
CLIP4-210ENST00000481628 LMOD3Q0VAK6 560 aa12□□□□□ -0.49
CLIP4-210ENST00000481628 SLC10A5Q5PT55 438 aa12□□□□□ -0.49
CLIP4-210ENST00000481628 PPP1R42Q7Z4L9 355 aa12□□□□□ -0.49
CLIP4-210ENST00000481628 PNMA8AQ86V59 439 aaPredicted RBP12□□□□□ -0.49
CLIP4-210ENST00000481628 NGEFQ8N5V2 710 aa12□□□□□ -0.49
CLIP4-210ENST00000481628 RPGRQ92834 1020 aaKnown RBP12□□□□□ -0.49
CLIP4-210ENST00000481628 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
CLIP4-210ENST00000481628 RIPK4P57078 832 aa11.99□□□□□ -0.49
CLIP4-210ENST00000481628 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
CLIP4-210ENST00000481628 VPS33BQ9H267 617 aa11.99□□□□□ -0.49
CLIP4-210ENST00000481628 THSD7BQ9C0I4 1608 aa11.99□□□□□ -0.49
CLIP4-210ENST00000481628 LAMB2P55268 1798 aa11.98□□□□□ -0.49
CLIP4-210ENST00000481628 TMEM88BA6NKF7 163 aa11.98□□□□□ -0.49
CLIP4-210ENST00000481628 PPEF1O14829 653 aaPredicted RBP11.98□□□□□ -0.49
CLIP4-210ENST00000481628 PROSER3Q2NL68 480 aa11.98□□□□□ -0.49
CLIP4-210ENST00000481628 C3orf67Q6ZVT6 689 aa11.98□□□□□ -0.49
CLIP4-210ENST00000481628 TNS4Q8IZW8 715 aa11.98□□□□□ -0.49
CLIP4-210ENST00000481628 JDP2Q8WYK2 163 aa11.98□□□□□ -0.49
CLIP4-210ENST00000481628 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
CLIP4-210ENST00000481628 MYBBP1AQ9BQG0 1328 aaKnown RBP11.97□□□□□ -0.49
CLIP4-210ENST00000481628 SCNN1DP51172 638 aa11.97□□□□□ -0.49
CLIP4-210ENST00000481628 EIF6P56537 245 aaKnown RBP11.97□□□□□ -0.49
CLIP4-210ENST00000481628 EAPPQ56P03 285 aaPredicted RBP11.97□□□□□ -0.49
CLIP4-210ENST00000481628 UTP14AQ9BVJ6 771 aaKnown RBP11.97□□□□□ -0.49
CLIP4-210ENST00000481628 RTFDC1Q9BY42 306 aaPredicted RBP11.97□□□□□ -0.49
CLIP4-210ENST00000481628 ATP6V0A2Q9Y487 856 aa11.97□□□□□ -0.49
CLIP4-210ENST00000481628 LRRC37AA6NMS7 1700 aa11.97□□□□□ -0.49
CLIP4-210ENST00000481628 ABCC4O15439 1325 aa11.96□□□□□ -0.49
CLIP4-210ENST00000481628 RASSF10A6NK89 507 aa11.96□□□□□ -0.49
CLIP4-210ENST00000481628 CHL1O00533 1208 aa11.96□□□□□ -0.49
CLIP4-210ENST00000481628 HOXB7P09629 217 aa11.96□□□□□ -0.49
CLIP4-210ENST00000481628 HSP90AB3PQ58FF7 597 aa11.96□□□□□ -0.49
CLIP4-210ENST00000481628 SLC51AQ86UW1 340 aa11.96□□□□□ -0.49
CLIP4-210ENST00000481628 NLRP3Q96P20 1036 aa11.96□□□□□ -0.49
CLIP4-210ENST00000481628 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
CLIP4-210ENST00000481628 EIF2S2P20042 333 aaKnown RBP11.95□□□□□ -0.5
CLIP4-210ENST00000481628 NLRP10Q86W26 655 aa11.95□□□□□ -0.5
CLIP4-210ENST00000481628 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
CLIP4-210ENST00000481628 LARGE2Q8N3Y3 721 aa11.95□□□□□ -0.5
CLIP4-210ENST00000481628 DUOX1Q9NRD9 1551 aa11.95□□□□□ -0.5
CLIP4-210ENST00000481628 CDHR2Q9BYE9 1310 aa11.94□□□□□ -0.5
CLIP4-210ENST00000481628 ANXA1P04083 346 aa11.94□□□□□ -0.5
CLIP4-210ENST00000481628 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-210ENST00000481628 VEGFBP49765 207 aa11.94□□□□□ -0.5
CLIP4-210ENST00000481628 TCIRG1Q13488 830 aa11.94□□□□□ -0.5
CLIP4-210ENST00000481628 MAP1SQ66K74 1059 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-210ENST00000481628 COPS6Q7L5N1 327 aa11.94□□□□□ -0.5
CLIP4-210ENST00000481628 NIM1KQ8IY84 436 aa11.94□□□□□ -0.5
CLIP4-210ENST00000481628 SUPT20HQ8NEM7 779 aa11.94□□□□□ -0.5
CLIP4-210ENST00000481628 XAGE3Q8WTP9 111 aa11.94□□□□□ -0.5
CLIP4-210ENST00000481628 PRDM10Q9NQV6 1147 aa11.94□□□□□ -0.5
CLIP4-210ENST00000481628 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
CLIP4-210ENST00000481628 DDX60Q8IY21 1712 aaKnown RBP11.94□□□□□ -0.5
CLIP4-210ENST00000481628 FOXN1O15353 648 aa11.93□□□□□ -0.5
CLIP4-210ENST00000481628 PPIP5K2O43314 1243 aa11.93□□□□□ -0.5
CLIP4-210ENST00000481628 BBOX1O75936 387 aa11.93□□□□□ -0.5
CLIP4-210ENST00000481628 USP50Q70EL3 339 aaPredicted RBP11.93□□□□□ -0.5
CLIP4-210ENST00000481628 SP8Q8IXZ3 490 aa11.93□□□□□ -0.5
CLIP4-210ENST00000481628 RUNDC1Q96C34 613 aa11.93□□□□□ -0.5
CLIP4-210ENST00000481628 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
CLIP4-210ENST00000481628 CLEC11AQ9Y240 323 aa11.93□□□□□ -0.5
CLIP4-210ENST00000481628 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
CLIP4-210ENST00000481628 EPS15P42566 896 aa11.92□□□□□ -0.5
CLIP4-210ENST00000481628 KIAA2012Q0VF49 1180 aa11.92□□□□□ -0.5
CLIP4-210ENST00000481628 GRAPQ13588 217 aa11.92□□□□□ -0.5
CLIP4-210ENST00000481628 AOC3Q16853 763 aa11.92□□□□□ -0.5
CLIP4-210ENST00000481628 TMC4Q7Z404 712 aa11.92□□□□□ -0.5
CLIP4-210ENST00000481628 GRAPLQ8TC17 118 aaPredicted RBP11.92□□□□□ -0.5
CLIP4-210ENST00000481628 GPRC5DQ9NZD1 345 aa11.92□□□□□ -0.5
CLIP4-210ENST00000481628 GJA3Q9Y6H8 435 aa11.92□□□□□ -0.5
CLIP4-210ENST00000481628 TRPM7Q96QT4 1865 aa11.91□□□□□ -0.5
CLIP4-210ENST00000481628 CTCFP49711 727 aaPredicted RBP11.91□□□□□ -0.5
CLIP4-210ENST00000481628 CXCL9Q07325 125 aa11.91□□□□□ -0.5
CLIP4-210ENST00000481628 KRT24Q2M2I5 525 aa11.91□□□□□ -0.5
CLIP4-210ENST00000481628 DEFB115Q30KQ5 88 aa11.91□□□□□ -0.5
CLIP4-210ENST00000481628 PLBD2Q8NHP8 589 aa11.91□□□□□ -0.5
CLIP4-210ENST00000481628 ISCA1Q9BUE6 129 aa11.91□□□□□ -0.5
CLIP4-210ENST00000481628 TMX4Q9H1E5 349 aaPredicted RBP11.91□□□□□ -0.5
CLIP4-210ENST00000481628 ADARB2Q9NS39 739 aaKnown RBP11.91□□□□□ -0.5
CLIP4-210ENST00000481628 CHPF2Q9P2E5 772 aa11.91□□□□□ -0.5
CLIP4-210ENST00000481628 ZNRF3Q9ULT6 936 aa11.91□□□□□ -0.5
CLIP4-210ENST00000481628 HCLS1P14317 486 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-210ENST00000481628 AIMP1Q12904 312 aaKnown RBP11.9□□□□□ -0.5
CLIP4-210ENST00000481628 HDGFL1Q5TGJ6 251 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms