RNA–Protein interactions for RNA: ENST00000481613.1

GGA1-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-219	ENST00000481613	GTF2E1	P29083	439 aa	Predicted RBP	13.7	□□□□□ -0.22
GGA1-219	ENST00000481613	EPHX2	P34913	555 aa		13.7	□□□□□ -0.22
GGA1-219	ENST00000481613	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
GGA1-219	ENST00000481613	CST9	Q5W186	159 aa		13.7	□□□□□ -0.22
GGA1-219	ENST00000481613	SCN4A	P35499	1836 aa		13.69	□□□□□ -0.22
GGA1-219	ENST00000481613	ALDH1B1	P30837	517 aa		13.69	□□□□□ -0.22
GGA1-219	ENST00000481613	HLF	Q16534	295 aa		13.69	□□□□□ -0.22
GGA1-219	ENST00000481613	EAPP	Q56P03	285 aa	Predicted RBP	13.69	□□□□□ -0.22
GGA1-219	ENST00000481613	NGEF	Q8N5V2	710 aa		13.69	□□□□□ -0.22
GGA1-219	ENST00000481613	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.69	□□□□□ -0.22
GGA1-219	ENST00000481613	HACL1	Q9UJ83	578 aa		13.69	□□□□□ -0.22
GGA1-219	ENST00000481613	COL4A5	P29400	1685 aa		13.69	□□□□□ -0.22
GGA1-219	ENST00000481613	RNF123	Q5XPI4	1314 aa		13.68	□□□□□ -0.22
GGA1-219	ENST00000481613	MYL6B	P14649	208 aa		13.68	□□□□□ -0.22
GGA1-219	ENST00000481613	ZEB1	P37275	1124 aa	Predicted RBP	13.68	□□□□□ -0.22
GGA1-219	ENST00000481613	SYNE4	Q8N205	404 aa		13.68	□□□□□ -0.22
GGA1-219	ENST00000481613	CCDC93	Q567U6	631 aa		13.67	□□□□□ -0.22
GGA1-219	ENST00000481613	AIDA	Q96BJ3	306 aa		13.67	□□□□□ -0.22
GGA1-219	ENST00000481613	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
GGA1-219	ENST00000481613	LTBP1	Q14766	1721 aa		13.67	□□□□□ -0.22
GGA1-219	ENST00000481613	BCOR	Q6W2J9	1755 aa		13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	CHL1	O00533	1208 aa		13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	EIF2S2	P20042	333 aa	Known RBP	13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	NEUROD2	Q15784	382 aa		13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	PARP10	Q53GL7	1025 aa		13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	TTLL7	Q6ZT98	887 aa		13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	PPP1R42	Q7Z4L9	355 aa		13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	ADAMTS8	Q9UP79	889 aa		13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	CLEC11A	Q9Y240	323 aa		13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	KDM3B	Q7LBC6	1761 aa		13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	ARFGEF2	Q9Y6D5	1785 aa		13.66	□□□□□ -0.22
GGA1-219	ENST00000481613	FAM177B	A6PVY3	158 aa		13.65	□□□□□ -0.22
GGA1-219	ENST00000481613	IARS	P41252	1262 aa	Known RBP	13.65	□□□□□ -0.22
GGA1-219	ENST00000481613	EPS15	P42566	896 aa		13.65	□□□□□ -0.22
GGA1-219	ENST00000481613	CCDC146	Q8IYE0	955 aa		13.65	□□□□□ -0.22
GGA1-219	ENST00000481613	ZNF34	Q8IZ26	560 aa		13.65	□□□□□ -0.22
GGA1-219	ENST00000481613	RTKN2	Q8IZC4	609 aa		13.65	□□□□□ -0.22
GGA1-219	ENST00000481613	TNRC18	O15417	2968 aa	Predicted RBP	13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	TRAF5	O00463	557 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	HOXB7	P09629	217 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	SCNN1D	P51172	638 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	MAP2K1	Q02750	393 aa	Predicted RBP	13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	CALD1	Q05682	793 aa	Known RBP	13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	CRY2	Q49AN0	593 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	GRIPAP1	Q4V328	841 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	HSP90AB3P	Q58FF7	597 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	CC2D2B	Q6DHV5	1058 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	CYP4F22	Q6NT55	531 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	PNMA8A	Q86V59	439 aa	Predicted RBP	13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	GPC2	Q8N158	579 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	ZBTB3	Q9H5J0	574 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	TRIM35	Q9UPQ4	493 aa		13.64	□□□□□ -0.23
GGA1-219	ENST00000481613	LAMB4	A4D0S4	1761 aa		13.63	□□□□□ -0.23
GGA1-219	ENST00000481613	DLG5	Q8TDM6	1919 aa		13.63	□□□□□ -0.23
GGA1-219	ENST00000481613	PDIA6	Q15084	440 aa		13.63	□□□□□ -0.23
GGA1-219	ENST00000481613	CAPNS2	Q96L46	248 aa		13.63	□□□□□ -0.23
GGA1-219	ENST00000481613	GPR101	Q96P66	508 aa	Predicted RBP	13.63	□□□□□ -0.23
GGA1-219	ENST00000481613	TSKS	Q9UJT2	592 aa		13.63	□□□□□ -0.23
GGA1-219	ENST00000481613	RIC1	Q4ADV7	1423 aa		13.63	□□□□□ -0.23
GGA1-219	ENST00000481613	CCDC85C	A6NKD9	419 aa		13.62	□□□□□ -0.23
GGA1-219	ENST00000481613	AOC2	O75106	756 aa		13.62	□□□□□ -0.23
GGA1-219	ENST00000481613	SUSD4	Q5VX71	490 aa		13.62	□□□□□ -0.23
GGA1-219	ENST00000481613	LRP10	Q7Z4F1	713 aa		13.62	□□□□□ -0.23
GGA1-219	ENST00000481613	CFAP44	Q96MT7	982 aa		13.62	□□□□□ -0.23
GGA1-219	ENST00000481613	PSMD1	Q99460	953 aa		13.62	□□□□□ -0.23
GGA1-219	ENST00000481613	LAS1L	Q9Y4W2	734 aa	Known RBP	13.62	□□□□□ -0.23
GGA1-219	ENST00000481613	GPT	P24298	496 aa		13.61	□□□□□ -0.23
GGA1-219	ENST00000481613	HOXA10	P31260	410 aa	Predicted RBP	13.61	□□□□□ -0.23
GGA1-219	ENST00000481613	MLLT1	Q03111	559 aa	Predicted RBP	13.61	□□□□□ -0.23
GGA1-219	ENST00000481613	NUTM1	Q86Y26	1132 aa		13.61	□□□□□ -0.23
GGA1-219	ENST00000481613	RPGR	Q92834	1020 aa	Known RBP	13.61	□□□□□ -0.23
GGA1-219	ENST00000481613	RBM17	Q96I25	401 aa	Known RBP	13.61	□□□□□ -0.23
GGA1-219	ENST00000481613	NLRP3	Q96P20	1036 aa		13.61	□□□□□ -0.23
GGA1-219	ENST00000481613	CHMP4A	Q9BY43	222 aa		13.61	□□□□□ -0.23
GGA1-219	ENST00000481613	UBN2	Q6ZU65	1347 aa		13.61	□□□□□ -0.23
GGA1-219	ENST00000481613	NTSR2	O95665	410 aa		13.6	□□□□□ -0.23
GGA1-219	ENST00000481613	SLC10A5	Q5PT55	438 aa		13.6	□□□□□ -0.23
GGA1-219	ENST00000481613	COPS6	Q7L5N1	327 aa		13.6	□□□□□ -0.23
GGA1-219	ENST00000481613	CRAMP1	Q96RY5	1269 aa		13.6	□□□□□ -0.23
GGA1-219	ENST00000481613	ZIC5	Q96T25	663 aa		13.6	□□□□□ -0.23
GGA1-219	ENST00000481613	UTP14A	Q9BVJ6	771 aa	Known RBP	13.6	□□□□□ -0.23
GGA1-219	ENST00000481613	TMX4	Q9H1E5	349 aa	Predicted RBP	13.6	□□□□□ -0.23
GGA1-219	ENST00000481613	ABT1	Q9ULW3	272 aa	Known RBP	13.6	□□□□□ -0.23
GGA1-219	ENST00000481613	TLL2	Q9Y6L7	1015 aa		13.6	□□□□□ -0.23
GGA1-219	ENST00000481613	HDGFL1	Q5TGJ6	251 aa		13.59	□□□□□ -0.23
GGA1-219	ENST00000481613	C3orf67	Q6ZVT6	689 aa		13.59	□□□□□ -0.23
GGA1-219	ENST00000481613	XAGE3	Q8WTP9	111 aa		13.59	□□□□□ -0.23
GGA1-219	ENST00000481613	PCDH10	Q9P2E7	1040 aa		13.59	□□□□□ -0.23
GGA1-219	ENST00000481613	DBF4	Q9UBU7	674 aa	Predicted RBP	13.59	□□□□□ -0.23
GGA1-219	ENST00000481613	THSD7B	Q9C0I4	1608 aa		13.59	□□□□□ -0.23
GGA1-219	ENST00000481613	ABCC12	Q96J65	1359 aa		13.58	□□□□□ -0.23
GGA1-219	ENST00000481613	HIRA	P54198	1017 aa	Predicted RBP	13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	GNAI1	P63096	354 aa		13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	AIMP1	Q12904	312 aa	Known RBP	13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	TCIRG1	Q13488	830 aa		13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	PROSER3	Q2NL68	480 aa		13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	SAPCD2	Q86UD0	394 aa		13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	NECTIN2	Q92692	538 aa		13.58	□□□□□ -0.24

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