RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 JADE2Q9NQC1 790 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 TXNDC16Q9P2K2 825 aa13.29□□□□□ -0.28
TRIM27-205ENST00000481474 NOB1Q9ULX3 412 aaKnown RBP13.29□□□□□ -0.28
TRIM27-205ENST00000481474 BIN1O00499 593 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 POLR3GO15318 223 aaPredicted RBP13.28□□□□□ -0.28
TRIM27-205ENST00000481474 IQCEQ6IPM2 695 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 SLC5A1P13866 664 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 SREK1Q8WXA9 508 aaKnown RBP13.28□□□□□ -0.28
TRIM27-205ENST00000481474 SLC12A7Q9Y666 1083 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 CUX2O14529 1486 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 LETM1O95202 739 aaPredicted RBP13.28□□□□□ -0.28
TRIM27-205ENST00000481474 GNAI3P08754 354 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 IFIT5Q13325 482 aaKnown RBP13.28□□□□□ -0.28
TRIM27-205ENST00000481474 CHRNA2Q15822 529 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 TMCO5AQ8N6Q1 288 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 RUNDC1Q96C34 613 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 PDRG1Q9NUG6 133 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 KAT14Q9H8E8 782 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 KIF9Q9HAQ2 790 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 RAB3GAP1Q15042 981 aa13.28□□□□□ -0.28
TRIM27-205ENST00000481474 TWISTNBQ3B726 338 aaPredicted RBP13.28□□□□□ -0.28
TRIM27-205ENST00000481474 ZNF513Q8N8E2 541 aaPredicted RBP13.28□□□□□ -0.28
TRIM27-205ENST00000481474 CASTP20810 708 aaKnown RBP13.27□□□□□ -0.28
TRIM27-205ENST00000481474 CCDC8Q9H0W5 538 aaPredicted RBP13.27□□□□□ -0.28
TRIM27-205ENST00000481474 ATP5J2-PTCD1G3V325 749 aa13.27□□□□□ -0.28
TRIM27-205ENST00000481474 KRT13P13646 458 aa13.27□□□□□ -0.28
TRIM27-205ENST00000481474 SLF2Q8IX21 1173 aa13.27□□□□□ -0.28
TRIM27-205ENST00000481474 GANCQ8TET4 914 aa13.27□□□□□ -0.28
TRIM27-205ENST00000481474 ZSWIM4Q9H7M6 989 aa13.27□□□□□ -0.28
TRIM27-205ENST00000481474 KIFC2Q96AC6 838 aa13.27□□□□□ -0.28
TRIM27-205ENST00000481474 CALML4Q96GE6 196 aa13.27□□□□□ -0.28
TRIM27-205ENST00000481474 CCDC114Q96M63 670 aa13.27□□□□□ -0.28
TRIM27-205ENST00000481474 CCDC144AA2RUR9 1427 aa13.27□□□□□ -0.29
TRIM27-205ENST00000481474 CCP110O43303 1012 aa13.27□□□□□ -0.29
TRIM27-205ENST00000481474 DAAM2Q86T65 1068 aa13.27□□□□□ -0.29
TRIM27-205ENST00000481474 TBCAO75347 108 aaKnown RBP13.27□□□□□ -0.29
TRIM27-205ENST00000481474 HEATR3Q7Z4Q2 680 aa13.27□□□□□ -0.29
TRIM27-205ENST00000481474 CDK19Q9BWU1 502 aa13.27□□□□□ -0.29
TRIM27-205ENST00000481474 MAK16Q9BXY0 300 aaKnown RBP13.27□□□□□ -0.29
TRIM27-205ENST00000481474 ZHX1Q9UKY1 873 aaPredicted RBP13.27□□□□□ -0.29
TRIM27-205ENST00000481474 CEP131Q9UPN4 1083 aa13.27□□□□□ -0.29
TRIM27-205ENST00000481474 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.26□□□□□ -0.29
TRIM27-205ENST00000481474 CASQ1P31415 396 aa13.26□□□□□ -0.29
TRIM27-205ENST00000481474 IVNS1ABPQ9Y6Y0 642 aa13.26□□□□□ -0.29
TRIM27-205ENST00000481474 ARHGAP35Q9NRY4 1499 aa13.26□□□□□ -0.29
TRIM27-205ENST00000481474 SMTNL1A8MU46 457 aa13.26□□□□□ -0.29
TRIM27-205ENST00000481474 FOXO3O43524 673 aa13.26□□□□□ -0.29
TRIM27-205ENST00000481474 MICALL1Q8N3F8 863 aa13.26□□□□□ -0.29
TRIM27-205ENST00000481474 FAM13AO94988 1023 aa13.26□□□□□ -0.29
TRIM27-205ENST00000481474 MCM10Q7L590 875 aa13.26□□□□□ -0.29
TRIM27-205ENST00000481474 RAB34Q9BZG1 259 aa13.26□□□□□ -0.29
TRIM27-205ENST00000481474 ANAPC4Q9UJX5 808 aa13.26□□□□□ -0.29
TRIM27-205ENST00000481474 SYNDIG1LA6NDD5 238 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 DDX39AO00148 427 aaKnown RBP13.25□□□□□ -0.29
TRIM27-205ENST00000481474 TSPY3P0CV98 308 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 TSPY8P0CW00 308 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 KIF4BQ2VIQ3 1234 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 CATIPQ7Z7H3 387 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 NUP62CLQ9H1M0 184 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 MAP3K12Q12852 859 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 ZNF654Q8IZM8 581 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 TRMT1Q9NXH9 659 aaKnown RBP13.25□□□□□ -0.29
TRIM27-205ENST00000481474 GMNNO75496 209 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 SSRP1Q08945 709 aaKnown RBP13.25□□□□□ -0.29
TRIM27-205ENST00000481474 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 KRT5P13647 590 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 Q3C1V9 767 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 CBFA2T2O43439 604 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 PDCP20941 246 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 SKAP1Q86WV1 359 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 SRCIN1Q9C0H9 1055 aa13.25□□□□□ -0.29
TRIM27-205ENST00000481474 CGNQ9P2M7 1197 aaKnown RBP13.25□□□□□ -0.29
TRIM27-205ENST00000481474 GAS8O95995 478 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 CCDC25Q86WR0 208 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 MICAL1Q8TDZ2 1067 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
TRIM27-205ENST00000481474 FAM160A1Q05DH4 1040 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 IMPG2Q9BZV3 1241 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 ESYT2A0FGR8 921 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 ATP6V1AP38606 617 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 TAOK3Q9H2K8 898 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 SMARCC2Q8TAQ2 1214 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 METTL14Q9HCE5 456 aaKnown RBP13.24□□□□□ -0.29
TRIM27-205ENST00000481474 ATP6V1E1P36543 226 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 THEMISQ8N1K5 641 aaPredicted RBP13.24□□□□□ -0.29
TRIM27-205ENST00000481474 PICK1Q9NRD5 415 aa13.24□□□□□ -0.29
TRIM27-205ENST00000481474 WDR46O15213 610 aaKnown RBP13.23□□□□□ -0.29
TRIM27-205ENST00000481474 RBM46Q8TBY0 533 aaKnown RBP13.23□□□□□ -0.29
TRIM27-205ENST00000481474 SETDB2Q96T68 719 aa13.23□□□□□ -0.29
TRIM27-205ENST00000481474 PLIN2Q99541 437 aa13.23□□□□□ -0.29
TRIM27-205ENST00000481474 MOSPD1Q9UJG1 213 aa13.23□□□□□ -0.29
TRIM27-205ENST00000481474 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
TRIM27-205ENST00000481474 TTC21AQ8NDW8 1320 aa13.23□□□□□ -0.29
TRIM27-205ENST00000481474 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
TRIM27-205ENST00000481474 PRPF38AQ8NAV1 312 aaKnown RBP13.23□□□□□ -0.29
TRIM27-205ENST00000481474 PRDM5Q9NQX1 630 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms