RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 CASTP20810 708 aaKnown RBP16.98■□□□□ 0.31
PHF3-204ENST00000481385 RFX5P48382 616 aaPredicted RBP16.97■□□□□ 0.31
PHF3-204ENST00000481385 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
PHF3-204ENST00000481385 EDC3Q96F86 508 aaKnown RBP16.97■□□□□ 0.31
PHF3-204ENST00000481385 TMEM63CQ9P1W3 806 aa16.97■□□□□ 0.31
PHF3-204ENST00000481385 XIRP1Q702N8 1843 aaKnown RBP16.97■□□□□ 0.31
PHF3-204ENST00000481385 ZNF445P59923 1031 aa16.97■□□□□ 0.31
PHF3-204ENST00000481385 UBE3BQ7Z3V4 1068 aa16.97■□□□□ 0.31
PHF3-204ENST00000481385 A0A0D9SFI3 127 aa16.96■□□□□ 0.31
PHF3-204ENST00000481385 NBPF26B4DH59 902 aa16.96■□□□□ 0.31
PHF3-204ENST00000481385 NBPF14Q5TI25 921 aa16.96■□□□□ 0.31
PHF3-204ENST00000481385 NBPF10Q6P3W6 841 aaKnown RBP16.96■□□□□ 0.31
PHF3-204ENST00000481385 NBPF15Q8N660 670 aa16.96■□□□□ 0.31
PHF3-204ENST00000481385 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.31
PHF3-204ENST00000481385 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.3
PHF3-204ENST00000481385 PTPN12Q05209 780 aaKnown RBP16.95■□□□□ 0.3
PHF3-204ENST00000481385 NDUFB9Q9Y6M9 179 aa16.95■□□□□ 0.3
PHF3-204ENST00000481385 ARFGEF2Q9Y6D5 1785 aa16.95■□□□□ 0.3
PHF3-204ENST00000481385 ERBB4Q15303 1308 aa16.95■□□□□ 0.3
PHF3-204ENST00000481385 NECTIN1Q15223 517 aa16.95■□□□□ 0.3
PHF3-204ENST00000481385 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
PHF3-204ENST00000481385 JAKMIP1Q96N16 626 aaKnown RBP16.95■□□□□ 0.3
PHF3-204ENST00000481385 TAF6LQ9Y6J9 622 aa16.94■□□□□ 0.3
PHF3-204ENST00000481385 CHGBP05060 677 aa16.94■□□□□ 0.3
PHF3-204ENST00000481385 NASPP49321 788 aaPredicted RBP16.94■□□□□ 0.3
PHF3-204ENST00000481385 PRIM1P49642 420 aaKnown RBP16.94■□□□□ 0.3
PHF3-204ENST00000481385 CASP7P55210 303 aa16.94■□□□□ 0.3
PHF3-204ENST00000481385 KCNB2Q92953 911 aa16.94■□□□□ 0.3
PHF3-204ENST00000481385 DBNLQ9UJU6 430 aaKnown RBP16.94■□□□□ 0.3
PHF3-204ENST00000481385 AFDNP55196 1824 aaKnown RBP16.94■□□□□ 0.3
PHF3-204ENST00000481385 TFCP2Q12800 502 aa16.94■□□□□ 0.3
PHF3-204ENST00000481385 COPRSQ9NQ92 184 aa16.94■□□□□ 0.3
PHF3-204ENST00000481385 LIMCH1Q9UPQ0 1083 aa16.94■□□□□ 0.3
PHF3-204ENST00000481385 RBM8AQ9Y5S9 174 aaKnown RBP16.94■□□□□ 0.3
PHF3-204ENST00000481385 A0A087WZG4 1122 aa16.93■□□□□ 0.3
PHF3-204ENST00000481385 RABL6Q3YEC7 729 aaPredicted RBP16.93■□□□□ 0.3
PHF3-204ENST00000481385 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
PHF3-204ENST00000481385 RBSNQ9H1K0 784 aa16.93■□□□□ 0.3
PHF3-204ENST00000481385 ST3GAL1Q11201 340 aa16.93■□□□□ 0.3
PHF3-204ENST00000481385 TTLL7Q6ZT98 887 aa16.93■□□□□ 0.3
PHF3-204ENST00000481385 PRDM11Q9NQV5 511 aa16.93■□□□□ 0.3
PHF3-204ENST00000481385 WDR17Q8IZU2 1322 aa16.92■□□□□ 0.3
PHF3-204ENST00000481385 GADD45BO75293 160 aaPredicted RBP16.92■□□□□ 0.3
PHF3-204ENST00000481385 CREB3L3Q68CJ9 461 aa16.92■□□□□ 0.3
PHF3-204ENST00000481385 TOM1L2Q6ZVM7 507 aa16.92■□□□□ 0.3
PHF3-204ENST00000481385 MAP4K1Q92918 833 aa16.92■□□□□ 0.3
PHF3-204ENST00000481385 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
PHF3-204ENST00000481385 ZSWIM6Q9HCJ5 1215 aa16.92■□□□□ 0.3
PHF3-204ENST00000481385 PARP4Q9UKK3 1724 aaKnown RBP16.92■□□□□ 0.3
PHF3-204ENST00000481385 PLEKHG2Q9H7P9 1386 aa16.92■□□□□ 0.3
PHF3-204ENST00000481385 TNNI3KQ59H18 835 aa16.91■□□□□ 0.3
PHF3-204ENST00000481385 PLBD2Q8NHP8 589 aa16.91■□□□□ 0.3
PHF3-204ENST00000481385 FPGT-TNNI3KV9GXZ4 949 aa16.91■□□□□ 0.3
PHF3-204ENST00000481385 LAMB4A4D0S4 1761 aa16.91■□□□□ 0.3
PHF3-204ENST00000481385 SYCE3A1L190 88 aa16.91■□□□□ 0.3
PHF3-204ENST00000481385 ZCRB1Q8TBF4 217 aaKnown RBP16.91■□□□□ 0.3
PHF3-204ENST00000481385 SNRKQ9NRH2 765 aa16.91■□□□□ 0.3
PHF3-204ENST00000481385 PDRG1Q9NUG6 133 aa16.91■□□□□ 0.3
PHF3-204ENST00000481385 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
PHF3-204ENST00000481385 COL15A1P39059 1388 aa16.91■□□□□ 0.3
PHF3-204ENST00000481385 MED23Q9ULK4 1368 aa16.91■□□□□ 0.3
PHF3-204ENST00000481385 A1BGP04217 495 aa16.9■□□□□ 0.3
PHF3-204ENST00000481385 CCDC83Q8IWF9 413 aa16.9■□□□□ 0.3
PHF3-204ENST00000481385 COL5A2P05997 1499 aaPredicted RBP16.9■□□□□ 0.3
PHF3-204ENST00000481385 WDR33Q9C0J8 1336 aaKnown RBP16.9■□□□□ 0.3
PHF3-204ENST00000481385 SLC27A2O14975 620 aa16.9■□□□□ 0.3
PHF3-204ENST00000481385 SYT1P21579 422 aa16.9■□□□□ 0.3
PHF3-204ENST00000481385 VPS53Q5VIR6 699 aa16.9■□□□□ 0.3
PHF3-204ENST00000481385 ANO8Q9HCE9 1232 aaPredicted RBP16.9■□□□□ 0.3
PHF3-204ENST00000481385 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.3
PHF3-204ENST00000481385 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.3
PHF3-204ENST00000481385 PCDH11XQ9BZA7 1347 aa16.89■□□□□ 0.29
PHF3-204ENST00000481385 PCDH11YQ9BZA8 1340 aa16.89■□□□□ 0.29
PHF3-204ENST00000481385 FOXO4P98177 505 aa16.89■□□□□ 0.29
PHF3-204ENST00000481385 ME3Q16798 604 aa16.89■□□□□ 0.29
PHF3-204ENST00000481385 LMBR1LQ6UX01 489 aa16.89■□□□□ 0.29
PHF3-204ENST00000481385 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
PHF3-204ENST00000481385 TCEANC2Q96MN5 208 aa16.89■□□□□ 0.29
PHF3-204ENST00000481385 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
PHF3-204ENST00000481385 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
PHF3-204ENST00000481385 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
PHF3-204ENST00000481385 CCDC9Q9Y3X0 531 aaKnown RBP16.88■□□□□ 0.29
PHF3-204ENST00000481385 HIP1O00291 1037 aa16.88■□□□□ 0.29
PHF3-204ENST00000481385 KCNJ4P48050 445 aa16.88■□□□□ 0.29
PHF3-204ENST00000481385 PPP1R9BQ96SB3 815 aa16.88■□□□□ 0.29
PHF3-204ENST00000481385 TPCN1Q9ULQ1 816 aa16.88■□□□□ 0.29
PHF3-204ENST00000481385 CNPY2Q9Y2B0 182 aa16.88■□□□□ 0.29
PHF3-204ENST00000481385 SOS2Q07890 1332 aaPredicted RBP16.88■□□□□ 0.29
PHF3-204ENST00000481385 STX6O43752 255 aa16.87■□□□□ 0.29
PHF3-204ENST00000481385 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
PHF3-204ENST00000481385 ATP5JP18859 108 aa16.87■□□□□ 0.29
PHF3-204ENST00000481385 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
PHF3-204ENST00000481385 TCHHQ07283 1943 aa16.87■□□□□ 0.29
PHF3-204ENST00000481385 JCADQ9P266 1359 aa16.87■□□□□ 0.29
PHF3-204ENST00000481385 GJB2P29033 226 aa16.87■□□□□ 0.29
PHF3-204ENST00000481385 LRSAM1Q6UWE0 723 aa16.87■□□□□ 0.29
PHF3-204ENST00000481385 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
PHF3-204ENST00000481385 ZBTB3Q9H5J0 574 aa16.87■□□□□ 0.29
PHF3-204ENST00000481385 SMC3Q9UQE7 1217 aa16.87■□□□□ 0.29
PHF3-204ENST00000481385 ZNF335Q9H4Z2 1342 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms