RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 PRICKLE2Q7Z3G6 844 aa12.12□□□□□ -0.47
PDCD4-206ENST00000481353 TMC4Q7Z404 712 aa12.12□□□□□ -0.47
PDCD4-206ENST00000481353 NIFKQ9BYG3 293 aaKnown RBP12.12□□□□□ -0.47
PDCD4-206ENST00000481353 PARP2Q9UGN5 583 aa12.12□□□□□ -0.47
PDCD4-206ENST00000481353 SCAMP3O14828 347 aaKnown RBP12.11□□□□□ -0.47
PDCD4-206ENST00000481353 ZC3H6P61129 1189 aaKnown RBP12.11□□□□□ -0.47
PDCD4-206ENST00000481353 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
PDCD4-206ENST00000481353 LDLRAD1Q5T700 205 aa12.11□□□□□ -0.47
PDCD4-206ENST00000481353 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
PDCD4-206ENST00000481353 PHACTR1Q9C0D0 580 aa12.11□□□□□ -0.47
PDCD4-206ENST00000481353 ZAP70P43403 619 aa12.1□□□□□ -0.47
PDCD4-206ENST00000481353 ATP2B2Q01814 1243 aa12.1□□□□□ -0.47
PDCD4-206ENST00000481353 ENOX2Q16206 610 aaKnown RBP12.1□□□□□ -0.47
PDCD4-206ENST00000481353 RHBDD1Q8TEB9 315 aa12.1□□□□□ -0.47
PDCD4-206ENST00000481353 IFT43Q96FT9 208 aa12.1□□□□□ -0.47
PDCD4-206ENST00000481353 DUSP9Q99956 384 aaKnown RBP12.1□□□□□ -0.47
PDCD4-206ENST00000481353 PDGFAP04085 211 aa12.09□□□□□ -0.47
PDCD4-206ENST00000481353 RNF144AP50876 292 aaPredicted RBP12.09□□□□□ -0.47
PDCD4-206ENST00000481353 DAB2P98082 770 aa12.09□□□□□ -0.47
PDCD4-206ENST00000481353 EDEM1Q92611 657 aa12.09□□□□□ -0.47
PDCD4-206ENST00000481353 KLK14Q9P0G3 267 aa12.09□□□□□ -0.47
PDCD4-206ENST00000481353 TNIKQ9UKE5 1360 aa12.08□□□□□ -0.48
PDCD4-206ENST00000481353 DNM1Q05193 864 aaKnown RBP12.08□□□□□ -0.48
PDCD4-206ENST00000481353 NIF3L1Q9GZT8 377 aa12.08□□□□□ -0.48
PDCD4-206ENST00000481353 PARP3Q9Y6F1 533 aa12.08□□□□□ -0.48
PDCD4-206ENST00000481353 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
PDCD4-206ENST00000481353 GPC1P35052 558 aa12.07□□□□□ -0.48
PDCD4-206ENST00000481353 RNFT1Q5M7Z0 435 aa12.07□□□□□ -0.48
PDCD4-206ENST00000481353 ALG1LQ6GMV1 187 aa12.07□□□□□ -0.48
PDCD4-206ENST00000481353 MRS2Q9HD23 443 aa12.07□□□□□ -0.48
PDCD4-206ENST00000481353 SORBS3O60504 671 aa12.06□□□□□ -0.48
PDCD4-206ENST00000481353 ITGA6P23229 1130 aa12.06□□□□□ -0.48
PDCD4-206ENST00000481353 GTF2E1P29083 439 aaPredicted RBP12.06□□□□□ -0.48
PDCD4-206ENST00000481353 TMEM214Q6NUQ4 689 aaKnown RBP12.06□□□□□ -0.48
PDCD4-206ENST00000481353 LYSMD3Q7Z3D4 306 aa12.06□□□□□ -0.48
PDCD4-206ENST00000481353 WWC3Q9ULE0 1092 aa12.06□□□□□ -0.48
PDCD4-206ENST00000481353 HDLBPQ00341 1268 aaKnown RBP12.05□□□□□ -0.48
PDCD4-206ENST00000481353 POU4F2Q12837 409 aa12.05□□□□□ -0.48
PDCD4-206ENST00000481353 FAM161BQ96MY7 647 aa12.05□□□□□ -0.48
PDCD4-206ENST00000481353 GRIP2Q9C0E4 1043 aa12.05□□□□□ -0.48
PDCD4-206ENST00000481353 PNMA6FA0A0J9YX94 578 aa12.04□□□□□ -0.48
PDCD4-206ENST00000481353 PCSK2P16519 638 aa12.04□□□□□ -0.48
PDCD4-206ENST00000481353 PSMD2Q13200 908 aa12.04□□□□□ -0.48
PDCD4-206ENST00000481353 TREML1Q86YW5 311 aa12.04□□□□□ -0.48
PDCD4-206ENST00000481353 VWA5B2Q8N398 1253 aa12.04□□□□□ -0.48
PDCD4-206ENST00000481353 FBF1Q8TES7 1133 aa12.04□□□□□ -0.48
PDCD4-206ENST00000481353 SREK1Q8WXA9 508 aaKnown RBP12.04□□□□□ -0.48
PDCD4-206ENST00000481353 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
PDCD4-206ENST00000481353 ERCC5P28715 1186 aaPredicted RBP12.03□□□□□ -0.48
PDCD4-206ENST00000481353 TXLNAP40222 546 aa12.03□□□□□ -0.48
PDCD4-206ENST00000481353 HIF1AQ16665 826 aa12.03□□□□□ -0.48
PDCD4-206ENST00000481353 RNF19AQ9NV58 838 aa12.03□□□□□ -0.48
PDCD4-206ENST00000481353 FAM13BQ9NYF5 915 aa12.03□□□□□ -0.48
PDCD4-206ENST00000481353 BCS1LQ9Y276 419 aa12.03□□□□□ -0.48
PDCD4-206ENST00000481353 RPLP1P05386 114 aaKnown RBP12.02□□□□□ -0.49
PDCD4-206ENST00000481353 GNASQ5JWF2 1037 aa12.02□□□□□ -0.49
PDCD4-206ENST00000481353 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
PDCD4-206ENST00000481353 C7orf43Q8WVR3 580 aa12.02□□□□□ -0.49
PDCD4-206ENST00000481353 DRC1Q96MC2 740 aa12.02□□□□□ -0.49
PDCD4-206ENST00000481353 SETDB2Q96T68 719 aa12.02□□□□□ -0.49
PDCD4-206ENST00000481353 METTL5Q9NRN9 209 aaKnown RBP12.02□□□□□ -0.49
PDCD4-206ENST00000481353 ZDHHC3Q9NYG2 299 aa12.02□□□□□ -0.49
PDCD4-206ENST00000481353 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
PDCD4-206ENST00000481353 GNA15P30679 374 aa12.01□□□□□ -0.49
PDCD4-206ENST00000481353 NAALADL2Q58DX5 795 aa12.01□□□□□ -0.49
PDCD4-206ENST00000481353 NUDT16Q96DE0 195 aaKnown RBP12.01□□□□□ -0.49
PDCD4-206ENST00000481353 CSRNP1Q96S65 589 aa12.01□□□□□ -0.49
PDCD4-206ENST00000481353 CFHR5Q9BXR6 569 aa12.01□□□□□ -0.49
PDCD4-206ENST00000481353 GPC6Q9Y625 555 aaPredicted RBP12.01□□□□□ -0.49
PDCD4-206ENST00000481353 CDC14CA4D256 554 aa12□□□□□ -0.49
PDCD4-206ENST00000481353 TGFBR3LH3BV60 316 aa12□□□□□ -0.49
PDCD4-206ENST00000481353 NEFLP07196 543 aa12□□□□□ -0.49
PDCD4-206ENST00000481353 INSM1Q01101 510 aaPredicted RBP12□□□□□ -0.49
PDCD4-206ENST00000481353 GPR152Q8TDT2 470 aa12□□□□□ -0.49
PDCD4-206ENST00000481353 NANOS1Q8WY41 292 aaKnown RBP12□□□□□ -0.49
PDCD4-206ENST00000481353 FRMD6Q96NE9 622 aa12□□□□□ -0.49
PDCD4-206ENST00000481353 DNAJC25Q9H1X3 360 aa12□□□□□ -0.49
PDCD4-206ENST00000481353 VTI1BQ9UEU0 232 aa12□□□□□ -0.49
PDCD4-206ENST00000481353 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
PDCD4-206ENST00000481353 C4orf17Q53FE4 359 aa11.99□□□□□ -0.49
PDCD4-206ENST00000481353 SLC27A3Q5K4L6 730 aa11.99□□□□□ -0.49
PDCD4-206ENST00000481353 IER5Q5VY09 327 aa11.99□□□□□ -0.49
PDCD4-206ENST00000481353 METTL16Q86W50 562 aaKnown RBP11.99□□□□□ -0.49
PDCD4-206ENST00000481353 CNTNAP3BQ96NU0 1288 aa11.99□□□□□ -0.49
PDCD4-206ENST00000481353 COL25A1Q9BXS0 654 aaPredicted RBP11.99□□□□□ -0.49
PDCD4-206ENST00000481353 CNTNAP3Q9BZ76 1288 aa11.99□□□□□ -0.49
PDCD4-206ENST00000481353 CEP162Q5TB80 1403 aa11.98□□□□□ -0.49
PDCD4-206ENST00000481353 MICAL2O94851 1124 aa11.98□□□□□ -0.49
PDCD4-206ENST00000481353 THBS1P07996 1170 aa11.98□□□□□ -0.49
PDCD4-206ENST00000481353 PLA2G4AP47712 749 aa11.98□□□□□ -0.49
PDCD4-206ENST00000481353 FANCCQ00597 558 aa11.98□□□□□ -0.49
PDCD4-206ENST00000481353 RAD51AP2Q09MP3 1159 aa11.98□□□□□ -0.49
PDCD4-206ENST00000481353 NBPF10Q6P3W6 841 aaKnown RBP11.98□□□□□ -0.49
PDCD4-206ENST00000481353 RHPN1Q8TCX5 695 aa11.98□□□□□ -0.49
PDCD4-206ENST00000481353 GGNBP2Q9H3C7 697 aa11.98□□□□□ -0.49
PDCD4-206ENST00000481353 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
PDCD4-206ENST00000481353 SPATA31C2B4DYI2 1134 aa11.97□□□□□ -0.49
PDCD4-206ENST00000481353 ORC1Q13415 861 aa11.97□□□□□ -0.49
PDCD4-206ENST00000481353 ZSCAN1Q8NBB4 408 aa11.97□□□□□ -0.49
PDCD4-206ENST00000481353 CECR2Q9BXF3 1484 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms