RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 GJD3Q8N144 294 aa14.86□□□□□ -0.03
CUL3-209ENST00000481135 FAM129BQ96TA1 746 aa14.86□□□□□ -0.03
CUL3-209ENST00000481135 TYRO3Q06418 890 aa14.85□□□□□ -0.03
CUL3-209ENST00000481135 RTCBQ9Y3I0 505 aaKnown RBP14.85□□□□□ -0.03
CUL3-209ENST00000481135 C11orf95C9JLR9 678 aaPredicted RBP14.84□□□□□ -0.03
CUL3-209ENST00000481135 C8orf34Q49A92 452 aa14.84□□□□□ -0.03
CUL3-209ENST00000481135 BCL2L13Q9BXK5 485 aa14.84□□□□□ -0.03
CUL3-209ENST00000481135 ZCCHC2Q9C0B9 1178 aaKnown RBP14.84□□□□□ -0.03
CUL3-209ENST00000481135 ATXN7O15265 892 aaPredicted RBP14.83□□□□□ -0.04
CUL3-209ENST00000481135 NEFLP07196 543 aa14.83□□□□□ -0.04
CUL3-209ENST00000481135 PLCB3Q01970 1234 aa14.83□□□□□ -0.04
CUL3-209ENST00000481135 TRIM22Q8IYM9 498 aa14.83□□□□□ -0.04
CUL3-209ENST00000481135 CMTR1Q8N1G2 835 aaKnown RBP14.83□□□□□ -0.04
CUL3-209ENST00000481135 BRD7Q9NPI1 651 aa14.83□□□□□ -0.04
CUL3-209ENST00000481135 PCDHGC4Q9Y5F7 938 aa14.83□□□□□ -0.04
CUL3-209ENST00000481135 TREHO43280 583 aa14.82□□□□□ -0.04
CUL3-209ENST00000481135 C11orf16Q9NQ32 467 aa14.82□□□□□ -0.04
CUL3-209ENST00000481135 FAM157BP0CG42 384 aa14.81□□□□□ -0.04
CUL3-209ENST00000481135 ALKBH8Q96BT7 664 aaKnown RBP14.81□□□□□ -0.04
CUL3-209ENST00000481135 RBM47A0AV96 593 aaKnown RBP14.8□□□□□ -0.04
CUL3-209ENST00000481135 SNRPBP14678 240 aaKnown RBP14.8□□□□□ -0.04
CUL3-209ENST00000481135 ITGA6P23229 1130 aa14.8□□□□□ -0.04
CUL3-209ENST00000481135 EAPPQ56P03 285 aaPredicted RBP14.8□□□□□ -0.04
CUL3-209ENST00000481135 ZNF326Q5BKZ1 582 aaKnown RBP14.8□□□□□ -0.04
CUL3-209ENST00000481135 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
CUL3-209ENST00000481135 FGD1P98174 961 aa14.79□□□□□ -0.04
CUL3-209ENST00000481135 UBAP1LF5GYI3 381 aa14.78□□□□□ -0.04
CUL3-209ENST00000481135 LAMC2Q13753 1193 aa14.78□□□□□ -0.04
CUL3-209ENST00000481135 KCNH4Q9UQ05 1017 aa14.78□□□□□ -0.04
CUL3-209ENST00000481135 KHNYNO15037 678 aaKnown RBP14.77□□□□□ -0.05
CUL3-209ENST00000481135 RBM25P49756 843 aaKnown RBP14.77□□□□□ -0.05
CUL3-209ENST00000481135 DBN1Q16643 649 aa14.77□□□□□ -0.05
CUL3-209ENST00000481135 PDE12Q6L8Q7 609 aaKnown RBP14.77□□□□□ -0.05
CUL3-209ENST00000481135 FOXR1Q6PIV2 292 aa14.77□□□□□ -0.05
CUL3-209ENST00000481135 NIF3L1Q9GZT8 377 aa14.77□□□□□ -0.05
CUL3-209ENST00000481135 GGNBP2Q9H3C7 697 aa14.77□□□□□ -0.05
CUL3-209ENST00000481135 GPR182O15218 404 aa14.76□□□□□ -0.05
CUL3-209ENST00000481135 KCNQ4P56696 695 aa14.76□□□□□ -0.05
CUL3-209ENST00000481135 FMR1Q06787 632 aaKnown RBP eCLIP14.76□□□□□ -0.05
CUL3-209ENST00000481135 DSC3Q14574 896 aa14.76□□□□□ -0.05
CUL3-209ENST00000481135 GIPC2Q8TF65 315 aa14.76□□□□□ -0.05
CUL3-209ENST00000481135 PHF24Q9UPV7 400 aa14.76□□□□□ -0.05
CUL3-209ENST00000481135 USP20Q9Y2K6 914 aa14.76□□□□□ -0.05
CUL3-209ENST00000481135 IGHA2P01877 340 aa14.75□□□□□ -0.05
CUL3-209ENST00000481135 XKR5Q6UX68 686 aa14.75□□□□□ -0.05
CUL3-209ENST00000481135 ZNF438Q7Z4V0 828 aa14.75□□□□□ -0.05
CUL3-209ENST00000481135 KCNMB2Q9Y691 235 aa14.75□□□□□ -0.05
CUL3-209ENST00000481135 XYLBO75191 536 aa14.74□□□□□ -0.05
CUL3-209ENST00000481135 MAPK8P45983 427 aa14.74□□□□□ -0.05
CUL3-209ENST00000481135 DCDC2BA2VCK2 349 aa14.73□□□□□ -0.05
CUL3-209ENST00000481135 EFSO43281 561 aa14.73□□□□□ -0.05
CUL3-209ENST00000481135 EGFRP00533 1210 aa14.73□□□□□ -0.05
CUL3-209ENST00000481135 P4HBP07237 508 aaKnown RBP14.73□□□□□ -0.05
CUL3-209ENST00000481135 THBS1P07996 1170 aa14.73□□□□□ -0.05
CUL3-209ENST00000481135 ATP2B2Q01814 1243 aa14.73□□□□□ -0.05
CUL3-209ENST00000481135 TNP2Q05952 138 aa14.73□□□□□ -0.05
CUL3-209ENST00000481135 ZNF837Q96EG3 531 aaPredicted RBP14.73□□□□□ -0.05
CUL3-209ENST00000481135 TRERF1Q96PN7 1200 aa14.73□□□□□ -0.05
CUL3-209ENST00000481135 CUEDC1Q9NWM3 386 aaPredicted RBP14.73□□□□□ -0.05
CUL3-209ENST00000481135 MAPTP10636 758 aaKnown RBP14.72□□□□□ -0.05
CUL3-209ENST00000481135 FBXO33Q7Z6M2 555 aa14.72□□□□□ -0.05
CUL3-209ENST00000481135 ATXN7L1Q9ULK2 861 aaPredicted RBP14.72□□□□□ -0.05
CUL3-209ENST00000481135 PPFIA3O75145 1194 aa14.71□□□□□ -0.05
CUL3-209ENST00000481135 ZNF16P17020 682 aaPredicted RBP14.71□□□□□ -0.05
CUL3-209ENST00000481135 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.05
CUL3-209ENST00000481135 UBAP2LQ14157 1087 aaKnown RBP14.71□□□□□ -0.05
CUL3-209ENST00000481135 MARK1Q9P0L2 795 aa14.71□□□□□ -0.05
CUL3-209ENST00000481135 A6NHS1 94 aa14.7□□□□□ -0.06
CUL3-209ENST00000481135 BNIP3LO60238 219 aa14.7□□□□□ -0.06
CUL3-209ENST00000481135 SFSWAPQ12872 951 aaKnown RBP14.7□□□□□ -0.06
CUL3-209ENST00000481135 TRIP4Q15650 581 aaPredicted RBP14.7□□□□□ -0.06
CUL3-209ENST00000481135 GTPBP3Q969Y2 492 aaKnown RBP14.7□□□□□ -0.06
CUL3-209ENST00000481135 ELP3Q9H9T3 547 aa14.7□□□□□ -0.06
CUL3-209ENST00000481135 CDC14CA4D256 554 aa14.69□□□□□ -0.06
CUL3-209ENST00000481135 CCINQ13939 588 aa14.69□□□□□ -0.06
CUL3-209ENST00000481135 NLRP13Q86W25 1043 aa14.69□□□□□ -0.06
CUL3-209ENST00000481135 SNX29Q8TEQ0 813 aa14.69□□□□□ -0.06
CUL3-209ENST00000481135 CFHR5Q9BXR6 569 aa14.69□□□□□ -0.06
CUL3-209ENST00000481135 DNAJC25Q9H1X3 360 aa14.69□□□□□ -0.06
CUL3-209ENST00000481135 EFCC1Q9HA90 598 aa14.69□□□□□ -0.06
CUL3-209ENST00000481135 NDFIP2Q9NV92 336 aa14.69□□□□□ -0.06
CUL3-209ENST00000481135 GRNP28799 593 aaKnown RBP14.68□□□□□ -0.06
CUL3-209ENST00000481135 SV2AQ7L0J3 742 aa14.68□□□□□ -0.06
CUL3-209ENST00000481135 PNMA5Q96PV4 448 aa14.68□□□□□ -0.06
CUL3-209ENST00000481135 E9PSI1 815 aa14.67□□□□□ -0.06
CUL3-209ENST00000481135 TNFRSF21O75509 655 aa14.67□□□□□ -0.06
CUL3-209ENST00000481135 LDHBP07195 334 aaKnown RBP14.67□□□□□ -0.06
CUL3-209ENST00000481135 ZNF428Q96B54 188 aa14.67□□□□□ -0.06
CUL3-209ENST00000481135 ABHD17AQ96GS6 310 aa14.67□□□□□ -0.06
CUL3-209ENST00000481135 CSRNP1Q96S65 589 aa14.67□□□□□ -0.06
CUL3-209ENST00000481135 LCE2BO14633 110 aa14.66□□□□□ -0.06
CUL3-209ENST00000481135 CPNE3O75131 537 aaKnown RBP14.66□□□□□ -0.06
CUL3-209ENST00000481135 ITGAEP38570 1179 aa14.66□□□□□ -0.06
CUL3-209ENST00000481135 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
CUL3-209ENST00000481135 ENOX2Q16206 610 aaKnown RBP14.66□□□□□ -0.06
CUL3-209ENST00000481135 TTC39BQ5VTQ0 682 aaPredicted RBP14.66□□□□□ -0.06
CUL3-209ENST00000481135 ALG1LQ6GMV1 187 aa14.66□□□□□ -0.06
CUL3-209ENST00000481135 PNMA6FA0A0J9YX94 578 aa14.65□□□□□ -0.06
CUL3-209ENST00000481135 VWA5B2Q8N398 1253 aa14.65□□□□□ -0.06
CUL3-209ENST00000481135 PMEPA1Q969W9 287 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms