RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 SYNE4Q8N205 404 aa16.66■□□□□ 0.26
ABCF3-215ENST00000481116 HYPKQ9NX55 129 aa16.66■□□□□ 0.26
ABCF3-215ENST00000481116 IBTKQ9P2D0 1353 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-215ENST00000481116 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
ABCF3-215ENST00000481116 PARP10Q53GL7 1025 aa16.65■□□□□ 0.26
ABCF3-215ENST00000481116 OLFM4Q6UX06 510 aa16.65■□□□□ 0.26
ABCF3-215ENST00000481116 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
ABCF3-215ENST00000481116 NLRP10Q86W26 655 aa16.65■□□□□ 0.26
ABCF3-215ENST00000481116 PLBD2Q8NHP8 589 aa16.65■□□□□ 0.26
ABCF3-215ENST00000481116 UTP14AQ9BVJ6 771 aaKnown RBP16.65■□□□□ 0.26
ABCF3-215ENST00000481116 HSP90AB3PQ58FF7 597 aa16.64■□□□□ 0.25
ABCF3-215ENST00000481116 IL16Q14005 1332 aa16.64■□□□□ 0.25
ABCF3-215ENST00000481116 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
ABCF3-215ENST00000481116 LMNB1P20700 586 aa16.63■□□□□ 0.25
ABCF3-215ENST00000481116 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
ABCF3-215ENST00000481116 C7orf43Q8WVR3 580 aa16.63■□□□□ 0.25
ABCF3-215ENST00000481116 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
ABCF3-215ENST00000481116 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
ABCF3-215ENST00000481116 C1QTNF8P60827 252 aa16.62■□□□□ 0.25
ABCF3-215ENST00000481116 TWISTNBQ3B726 338 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-215ENST00000481116 CRY2Q49AN0 593 aa16.62■□□□□ 0.25
ABCF3-215ENST00000481116 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
ABCF3-215ENST00000481116 SLC51AQ86UW1 340 aa16.62■□□□□ 0.25
ABCF3-215ENST00000481116 WDR63Q8IWG1 891 aa16.62■□□□□ 0.25
ABCF3-215ENST00000481116 RPGRQ92834 1020 aaKnown RBP16.62■□□□□ 0.25
ABCF3-215ENST00000481116 TRMT112Q9UI30 125 aaKnown RBP16.62■□□□□ 0.25
ABCF3-215ENST00000481116 FANCIQ9NVI1 1328 aa16.62■□□□□ 0.25
ABCF3-215ENST00000481116 CACNA1FO60840 1977 aa16.62■□□□□ 0.25
ABCF3-215ENST00000481116 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-215ENST00000481116 ALDH1B1P30837 517 aa16.61■□□□□ 0.25
ABCF3-215ENST00000481116 RIC3Q7Z5B4 369 aa16.61■□□□□ 0.25
ABCF3-215ENST00000481116 ISCA1Q9BUE6 129 aa16.61■□□□□ 0.25
ABCF3-215ENST00000481116 NMRK2Q9NPI5 230 aa16.61■□□□□ 0.25
ABCF3-215ENST00000481116 RTL5Q5HYW3 569 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-215ENST00000481116 SLC10A5Q5PT55 438 aa16.6■□□□□ 0.25
ABCF3-215ENST00000481116 NLRP3Q96P20 1036 aa16.6■□□□□ 0.25
ABCF3-215ENST00000481116 KIF3CO14782 793 aa16.59■□□□□ 0.25
ABCF3-215ENST00000481116 EXOSC9Q06265 439 aaKnown RBP16.59■□□□□ 0.25
ABCF3-215ENST00000481116 GOLGA2Q08379 1002 aa16.59■□□□□ 0.25
ABCF3-215ENST00000481116 CCDC93Q567U6 631 aa16.59■□□□□ 0.25
ABCF3-215ENST00000481116 MYD88Q99836 296 aa16.59■□□□□ 0.25
ABCF3-215ENST00000481116 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
ABCF3-215ENST00000481116 HOXA10P31260 410 aaPredicted RBP16.58■□□□□ 0.24
ABCF3-215ENST00000481116 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
ABCF3-215ENST00000481116 G2E3Q7L622 706 aa16.58■□□□□ 0.24
ABCF3-215ENST00000481116 FAM89AQ96GI7 184 aa16.58■□□□□ 0.24
ABCF3-215ENST00000481116 RBM17Q96I25 401 aaKnown RBP16.58■□□□□ 0.24
ABCF3-215ENST00000481116 SH3TC1Q8TE82 1336 aa16.58■□□□□ 0.24
ABCF3-215ENST00000481116 LTBP3Q9NS15 1303 aa16.57■□□□□ 0.24
ABCF3-215ENST00000481116 STK31Q9BXU1 1019 aa16.57■□□□□ 0.24
ABCF3-215ENST00000481116 RRAGCQ9HB90 399 aa16.57■□□□□ 0.24
ABCF3-215ENST00000481116 RNF123Q5XPI4 1314 aa16.56■□□□□ 0.24
ABCF3-215ENST00000481116 VAMP4O75379 141 aa16.56■□□□□ 0.24
ABCF3-215ENST00000481116 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
ABCF3-215ENST00000481116 JARID2Q92833 1246 aaPredicted RBP16.56■□□□□ 0.24
ABCF3-215ENST00000481116 CRAMP1Q96RY5 1269 aa16.56■□□□□ 0.24
ABCF3-215ENST00000481116 ZNF277Q9NRM2 450 aaPredicted RBP16.56■□□□□ 0.24
ABCF3-215ENST00000481116 MAP3K2Q9Y2U5 619 aa16.56■□□□□ 0.24
ABCF3-215ENST00000481116 COL4A1P02462 1669 aa16.56■□□□□ 0.24
ABCF3-215ENST00000481116 ABCC4O15439 1325 aa16.55■□□□□ 0.24
ABCF3-215ENST00000481116 PPEF1O14829 653 aaPredicted RBP16.55■□□□□ 0.24
ABCF3-215ENST00000481116 FKBP4Q02790 459 aaKnown RBP eCLIP16.55■□□□□ 0.24
ABCF3-215ENST00000481116 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
ABCF3-215ENST00000481116 SNED1Q8TER0 1413 aa16.54■□□□□ 0.24
ABCF3-215ENST00000481116 KDM2BQ8NHM5 1336 aa16.54■□□□□ 0.24
ABCF3-215ENST00000481116 ZNF521Q96K83 1311 aa16.54■□□□□ 0.24
ABCF3-215ENST00000481116 PI4KAP2A4QPH2 592 aa16.54■□□□□ 0.24
ABCF3-215ENST00000481116 GLTPD2A6NH11 291 aa16.54■□□□□ 0.24
ABCF3-215ENST00000481116 DDX58O95786 925 aaKnown RBP16.54■□□□□ 0.24
ABCF3-215ENST00000481116 TRIM28Q13263 835 aaKnown RBP16.54■□□□□ 0.24
ABCF3-215ENST00000481116 RTKN2Q8IZC4 609 aa16.54■□□□□ 0.24
ABCF3-215ENST00000481116 PI4KAP1Q8N8J0 262 aa16.54■□□□□ 0.24
ABCF3-215ENST00000481116 CHMP4AQ9BY43 222 aa16.54■□□□□ 0.24
ABCF3-215ENST00000481116 MYH3P11055 1940 aa16.54■□□□□ 0.24
ABCF3-215ENST00000481116 ZC3H4Q9UPT8 1303 aaKnown RBP16.53■□□□□ 0.24
ABCF3-215ENST00000481116 KSR2Q6VAB6 950 aa16.53■□□□□ 0.24
ABCF3-215ENST00000481116 IRS4O14654 1257 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-215ENST00000481116 MYH16Q9H6N6 1097 aa16.52■□□□□ 0.24
ABCF3-215ENST00000481116 WDR90Q96KV7 1748 aa16.52■□□□□ 0.24
ABCF3-215ENST00000481116 SPEF2Q9C093 1822 aa16.52■□□□□ 0.23
ABCF3-215ENST00000481116 COL4A5P29400 1685 aa16.51■□□□□ 0.23
ABCF3-215ENST00000481116 CCER2I3L3R5 266 aa16.51■□□□□ 0.23
ABCF3-215ENST00000481116 IGKV5-2P06315 115 aa16.51■□□□□ 0.23
ABCF3-215ENST00000481116 FLIIQ13045 1269 aa16.51■□□□□ 0.23
ABCF3-215ENST00000481116 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
ABCF3-215ENST00000481116 ZBTB38Q8NAP3 1195 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-215ENST00000481116 CCDC191Q8NCU4 936 aa16.51■□□□□ 0.23
ABCF3-215ENST00000481116 CWC25Q9NXE8 425 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-215ENST00000481116 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
ABCF3-215ENST00000481116 IARSP41252 1262 aaKnown RBP16.5■□□□□ 0.23
ABCF3-215ENST00000481116 CWF19L2Q2TBE0 894 aaKnown RBP16.5■□□□□ 0.23
ABCF3-215ENST00000481116 PSMD1Q99460 953 aa16.5■□□□□ 0.23
ABCF3-215ENST00000481116 LRRC37AA6NMS7 1700 aa16.5■□□□□ 0.23
ABCF3-215ENST00000481116 POTECB2RU33 542 aa16.49■□□□□ 0.23
ABCF3-215ENST00000481116 TOMM70O94826 608 aa16.49■□□□□ 0.23
ABCF3-215ENST00000481116 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
ABCF3-215ENST00000481116 GRAPQ13588 217 aa16.49■□□□□ 0.23
ABCF3-215ENST00000481116 SF3B3Q15393 1217 aaKnown RBP16.49■□□□□ 0.23
ABCF3-215ENST00000481116 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
ABCF3-215ENST00000481116 DPY19L2Q6NUT2 758 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms