RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 A0A1B0GTH6 734 aa11.18□□□□□ -0.62
CBX3-206ENST00000481057 ZNF787Q6DD87 383 aa11.18□□□□□ -0.62
CBX3-206ENST00000481057 PHLDB3Q6NSJ2 640 aa11.18□□□□□ -0.62
CBX3-206ENST00000481057 C1orf216Q8TAB5 229 aa11.18□□□□□ -0.62
CBX3-206ENST00000481057 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
CBX3-206ENST00000481057 B4GALNT3Q6L9W6 998 aa11.17□□□□□ -0.62
CBX3-206ENST00000481057 ZDHHC3Q9NYG2 299 aa11.17□□□□□ -0.62
CBX3-206ENST00000481057 ZFYVE16Q7Z3T8 1539 aa11.17□□□□□ -0.62
CBX3-206ENST00000481057 DENND4BO75064 1496 aaPredicted RBP11.17□□□□□ -0.62
CBX3-206ENST00000481057 ATP4AP20648 1035 aa11.16□□□□□ -0.62
CBX3-206ENST00000481057 YY1P25490 414 aa11.16□□□□□ -0.62
CBX3-206ENST00000481057 TXLNAP40222 546 aa11.16□□□□□ -0.62
CBX3-206ENST00000481057 CCDC155Q8N6L0 562 aa11.16□□□□□ -0.62
CBX3-206ENST00000481057 RICTORQ6R327 1708 aa11.15□□□□□ -0.62
CBX3-206ENST00000481057 DISP1Q96F81 1524 aa11.15□□□□□ -0.62
CBX3-206ENST00000481057 MSX1P28360 303 aa11.15□□□□□ -0.62
CBX3-206ENST00000481057 VTI1AQ96AJ9 217 aa11.15□□□□□ -0.62
CBX3-206ENST00000481057 AIDAQ96BJ3 306 aa11.15□□□□□ -0.62
CBX3-206ENST00000481057 FHOD3Q2V2M9 1422 aa11.15□□□□□ -0.62
CBX3-206ENST00000481057 EFCAB5A4FU69 1503 aa11.14□□□□□ -0.63
CBX3-206ENST00000481057 COL26A1Q96A83 441 aa11.14□□□□□ -0.63
CBX3-206ENST00000481057 MKNK1Q9BUB5 465 aa11.14□□□□□ -0.63
CBX3-206ENST00000481057 PHACTR1Q9C0D0 580 aa11.14□□□□□ -0.63
CBX3-206ENST00000481057 HCN4Q9Y3Q4 1203 aa11.14□□□□□ -0.63
CBX3-206ENST00000481057 F11P03951 625 aa11.13□□□□□ -0.63
CBX3-206ENST00000481057 PDIA4P13667 645 aaKnown RBP11.13□□□□□ -0.63
CBX3-206ENST00000481057 TATP17735 454 aaPredicted RBP11.13□□□□□ -0.63
CBX3-206ENST00000481057 C1orf53Q5VUE5 145 aa11.13□□□□□ -0.63
CBX3-206ENST00000481057 ALDH16A1Q8IZ83 802 aa11.13□□□□□ -0.63
CBX3-206ENST00000481057 GAS2L1Q99501 681 aaPredicted RBP11.13□□□□□ -0.63
CBX3-206ENST00000481057 GPAMQ9HCL2 828 aa11.13□□□□□ -0.63
CBX3-206ENST00000481057 C3P01024 1663 aa11.13□□□□□ -0.63
CBX3-206ENST00000481057 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
CBX3-206ENST00000481057 PTCD1O75127 700 aaKnown RBP11.12□□□□□ -0.63
CBX3-206ENST00000481057 CAPN12Q6ZSI9 719 aa11.12□□□□□ -0.63
CBX3-206ENST00000481057 NGLY1Q96IV0 654 aa11.12□□□□□ -0.63
CBX3-206ENST00000481057 ABCA9Q8IUA7 1624 aa11.12□□□□□ -0.63
CBX3-206ENST00000481057 PPFIA3O75145 1194 aa11.11□□□□□ -0.63
CBX3-206ENST00000481057 BRD1O95696 1058 aa11.11□□□□□ -0.63
CBX3-206ENST00000481057 SCNN1AP37088 669 aa11.11□□□□□ -0.63
CBX3-206ENST00000481057 QTRT2Q9H974 415 aaKnown RBP11.11□□□□□ -0.63
CBX3-206ENST00000481057 TCOF1Q13428 1488 aaKnown RBP11.11□□□□□ -0.63
CBX3-206ENST00000481057 ZMYM4Q5VZL5 1548 aa11.1□□□□□ -0.63
CBX3-206ENST00000481057 LRRC7Q96NW7 1537 aa11.1□□□□□ -0.63
CBX3-206ENST00000481057 ITGA6P23229 1130 aa11.1□□□□□ -0.63
CBX3-206ENST00000481057 CRISPLD1Q9H336 500 aa11.1□□□□□ -0.63
CBX3-206ENST00000481057 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.637e-6■■■■■ 74.5
CBX3-206ENST00000481057 GPC6Q9Y625 555 aaPredicted RBP11.1□□□□□ -0.63
CBX3-206ENST00000481057 PLA2R1Q13018 1463 aa11.1□□□□□ -0.63
CBX3-206ENST00000481057 MAGI2Q86UL8 1455 aa11.1□□□□□ -0.63
CBX3-206ENST00000481057 RTN1Q16799 776 aa11.09□□□□□ -0.63
CBX3-206ENST00000481057 RIPOR1Q6ZS17 1223 aa11.09□□□□□ -0.63
CBX3-206ENST00000481057 RHPN1Q8TCX5 695 aa11.09□□□□□ -0.63
CBX3-206ENST00000481057 C7orf43Q8WVR3 580 aa11.09□□□□□ -0.63
CBX3-206ENST00000481057 MYO19Q96H55 970 aa11.09□□□□□ -0.63
CBX3-206ENST00000481057 RUBCNLQ9H714 662 aa11.09□□□□□ -0.63
CBX3-206ENST00000481057 CUEDC1Q9NWM3 386 aaPredicted RBP11.09□□□□□ -0.63
CBX3-206ENST00000481057 NXF1Q9UBU9 619 aaKnown RBP11.09□□□□□ -0.63
CBX3-206ENST00000481057 RAPGEF2Q9Y4G8 1499 aa11.08□□□□□ -0.64
CBX3-206ENST00000481057 RXRBP28702 533 aa11.08□□□□□ -0.64
CBX3-206ENST00000481057 ZIC5Q96T25 663 aa11.08□□□□□ -0.64
CBX3-206ENST00000481057 SEPT3Q9UH03 358 aa11.08□□□□□ -0.64
CBX3-206ENST00000481057 ZNF772Q68DY9 489 aaPredicted RBP11.07□□□□□ -0.64
CBX3-206ENST00000481057 BICDL1Q6ZP65 573 aa11.07□□□□□ -0.64
CBX3-206ENST00000481057 PGBD3Q8N328 593 aa11.07□□□□□ -0.64
CBX3-206ENST00000481057 IQGAP2Q13576 1575 aa11.07□□□□□ -0.64
CBX3-206ENST00000481057 ATP10AO60312 1499 aa11.06□□□□□ -0.64
CBX3-206ENST00000481057 THBS1P07996 1170 aa11.06□□□□□ -0.64
CBX3-206ENST00000481057 ARSJQ5FYB0 599 aaPredicted RBP11.06□□□□□ -0.64
CBX3-206ENST00000481057 C16orf46Q6P387 395 aa11.06□□□□□ -0.64
CBX3-206ENST00000481057 NPAS3Q8IXF0 933 aa11.06□□□□□ -0.64
CBX3-206ENST00000481057 TRIM22Q8IYM9 498 aa11.06□□□□□ -0.64
CBX3-206ENST00000481057 KLRG1Q96E93 195 aa11.06□□□□□ -0.64
CBX3-206ENST00000481057 A0A1W2PNR3 127 aa11.05□□□□□ -0.64
CBX3-206ENST00000481057 H7C1W4 665 aa11.05□□□□□ -0.64
CBX3-206ENST00000481057 VEGFBP49765 207 aa11.05□□□□□ -0.64
CBX3-206ENST00000481057 LBRQ14739 615 aaKnown RBP11.05□□□□□ -0.64
CBX3-206ENST00000481057 NAA30Q147X3 362 aaPredicted RBP11.05□□□□□ -0.64
CBX3-206ENST00000481057 COX20Q5RI15 118 aa11.05□□□□□ -0.64
CBX3-206ENST00000481057 C9orf84Q5VXU9 1444 aa11.05□□□□□ -0.64
CBX3-206ENST00000481057 ZNF837Q96EG3 531 aaPredicted RBP11.05□□□□□ -0.64
CBX3-206ENST00000481057 SAP130Q9H0E3 1048 aa11.05□□□□□ -0.64
CBX3-206ENST00000481057 NUCKS1Q9H1E3 243 aaKnown RBP11.05□□□□□ -0.64
CBX3-206ENST00000481057 MTMR7Q9Y216 660 aa11.05□□□□□ -0.64
CBX3-206ENST00000481057 H3BM21 787 aa11.04□□□□□ -0.64
CBX3-206ENST00000481057 ARID4AP29374 1257 aaPredicted RBP11.04□□□□□ -0.64
CBX3-206ENST00000481057 DBN1Q16643 649 aa11.04□□□□□ -0.64
CBX3-206ENST00000481057 EFHC2Q5JST6 749 aa11.04□□□□□ -0.64
CBX3-206ENST00000481057 TXNDC2Q86VQ3 553 aa11.04□□□□□ -0.64
CBX3-206ENST00000481057 GMCL1Q96IK5 515 aa11.04□□□□□ -0.64
CBX3-206ENST00000481057 LRFN2Q9ULH4 789 aa11.04□□□□□ -0.64
CBX3-206ENST00000481057 HECW1Q76N89 1606 aa11.03□□□□□ -0.64
CBX3-206ENST00000481057 KCNA1Q09470 495 aa11.03□□□□□ -0.64
CBX3-206ENST00000481057 DGKZQ13574 1117 aa11.03□□□□□ -0.64
CBX3-206ENST00000481057 NLRP8Q86W28 1048 aa11.03□□□□□ -0.64
CBX3-206ENST00000481057 CDK12Q9NYV4 1490 aaPredicted RBP11.03□□□□□ -0.64
CBX3-206ENST00000481057 HIF1AQ16665 826 aa11.02□□□□□ -0.65
CBX3-206ENST00000481057 GTF3C2Q8WUA4 911 aaPredicted RBP11.02□□□□□ -0.65
CBX3-206ENST00000481057 NANOS1Q8WY41 292 aaKnown RBP11.02□□□□□ -0.65
CBX3-206ENST00000481057 HSH2DQ96JZ2 352 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms