RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 EIF2AK4Q9P2K8 1649 aaKnown RBP15.68■□□□□ 0.1
MCF2L-225ENST00000480321 KCNG4Q8TDN1 519 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 RANBP6O60518 1105 aaKnown RBP15.68■□□□□ 0.1
MCF2L-225ENST00000480321 CCDC96Q2M329 555 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 SLF2Q8IX21 1173 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 KRT222Q8N1A0 295 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 NCOA7Q8NI08 942 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 TRMT1Q9NXH9 659 aaKnown RBP15.68■□□□□ 0.1
MCF2L-225ENST00000480321 EMILIN1Q9Y6C2 1016 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 ADGRF5Q8IZF2 1346 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 PARD3Q8TEW0 1356 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 ANKRD18BA2A2Z9 1011 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 WDHD1O75717 1129 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-225ENST00000480321 KIF5BP33176 963 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 AMOTL2Q9Y2J4 779 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.68■□□□□ 0.1
MCF2L-225ENST00000480321 USP16Q9Y5T5 823 aa15.68■□□□□ 0.1
MCF2L-225ENST00000480321 PPP4R3AQ6IN85 833 aa15.67■□□□□ 0.1
MCF2L-225ENST00000480321 BIVM-ERCC5R4GMW8 1640 aa15.67■□□□□ 0.1
MCF2L-225ENST00000480321 IFI16Q16666 785 aaKnown RBP15.67■□□□□ 0.1
MCF2L-225ENST00000480321 TEX13AQ9BXU3 409 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-225ENST00000480321 NLRP5P59047 1200 aa15.67■□□□□ 0.1
MCF2L-225ENST00000480321 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
MCF2L-225ENST00000480321 SKAP1Q86WV1 359 aa15.67■□□□□ 0.1
MCF2L-225ENST00000480321 SMC5Q8IY18 1101 aa15.67■□□□□ 0.1
MCF2L-225ENST00000480321 ANKRD44Q8N8A2 993 aa15.67■□□□□ 0.1
MCF2L-225ENST00000480321 CALML4Q96GE6 196 aa15.67■□□□□ 0.1
MCF2L-225ENST00000480321 EHMT1Q9H9B1 1298 aa15.67■□□□□ 0.1
MCF2L-225ENST00000480321 ZKSCAN5Q9Y2L8 839 aa15.67■□□□□ 0.1
MCF2L-225ENST00000480321 SPAG1Q07617 926 aa15.66■□□□□ 0.1
MCF2L-225ENST00000480321 NOLC1Q14978 699 aaKnown RBP eCLIP15.66■□□□□ 0.1
MCF2L-225ENST00000480321 CCDC178Q5BJE1 867 aa15.66■□□□□ 0.1
MCF2L-225ENST00000480321 TCP11L1Q9NUJ3 509 aa15.66■□□□□ 0.1
MCF2L-225ENST00000480321 ORC3Q9UBD5 711 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-225ENST00000480321 POLR3AO14802 1390 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-225ENST00000480321 ZFYP08048 801 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-225ENST00000480321 CTR9Q6PD62 1173 aa15.66■□□□□ 0.1
MCF2L-225ENST00000480321 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
MCF2L-225ENST00000480321 NOS1P29475 1434 aa15.66■□□□□ 0.1
MCF2L-225ENST00000480321 GUCY1B3Q02153 619 aa15.66■□□□□ 0.1
MCF2L-225ENST00000480321 EXOC5O00471 708 aa15.66■□□□□ 0.1
MCF2L-225ENST00000480321 MTIF2P46199 727 aaKnown RBP15.66■□□□□ 0.1
MCF2L-225ENST00000480321 PUS7Q96PZ0 661 aaKnown RBP15.66■□□□□ 0.1
MCF2L-225ENST00000480321 SDSP20132 328 aa15.65■□□□□ 0.1
MCF2L-225ENST00000480321 CUL5Q93034 780 aa15.65■□□□□ 0.1
MCF2L-225ENST00000480321 CETN1Q12798 172 aa15.65■□□□□ 0.1
MCF2L-225ENST00000480321 PPP1R42Q7Z4L9 355 aa15.65■□□□□ 0.1
MCF2L-225ENST00000480321 ESYT1Q9BSJ8 1104 aa15.65■□□□□ 0.1
MCF2L-225ENST00000480321 RBM27Q9P2N5 1060 aaKnown RBP15.65■□□□□ 0.1
MCF2L-225ENST00000480321 TTLL12Q14166 644 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-225ENST00000480321 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-225ENST00000480321 TFIP11Q9UBB9 837 aaKnown RBP15.65■□□□□ 0.1
MCF2L-225ENST00000480321 XRCC6P12956 609 aaKnown RBP eCLIP15.65■□□□□ 0.1
MCF2L-225ENST00000480321 C8orf34Q49A92 452 aa15.65■□□□□ 0.1
MCF2L-225ENST00000480321 DDX12PQ92771 950 aa15.65■□□□□ 0.1
MCF2L-225ENST00000480321 MAPKBP1O60336 1514 aa15.65■□□□□ 0.1
MCF2L-225ENST00000480321 POLR3GO15318 223 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-225ENST00000480321 GDPD2Q9HCC8 539 aa15.65■□□□□ 0.1
MCF2L-225ENST00000480321 METAP2P50579 478 aaKnown RBP eCLIP15.64■□□□□ 0.09
MCF2L-225ENST00000480321 TDRD12Q587J7 1177 aaKnown RBP15.64■□□□□ 0.09
MCF2L-225ENST00000480321 CCDC82Q8N4S0 544 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 RHPN1Q8TCX5 695 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 GRIN2AQ12879 1464 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 HCLS1P14317 486 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-225ENST00000480321 GPTP24298 496 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 CCT2P78371 535 aaKnown RBP15.64■□□□□ 0.09
MCF2L-225ENST00000480321 WDR78Q5VTH9 848 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 STXBP4Q6ZWJ1 553 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 UBA5Q9GZZ9 404 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 IVLP07476 585 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 RAB3GAP1Q15042 981 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 TMEM87AQ8NBN3 555 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 MAP3K2Q9Y2U5 619 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 PLB1Q6P1J6 1458 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 TMEM67Q5HYA8 995 aa15.64■□□□□ 0.09
MCF2L-225ENST00000480321 GTPBP4Q9BZE4 634 aaKnown RBP15.64■□□□□ 0.09
MCF2L-225ENST00000480321 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 CCDC175P0C221 793 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 UQCRFS1P1P0C7P4 283 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 PDE1AP54750 535 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 TMTC2Q8N394 836 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 ANKRD24Q8TF21 1146 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 ZBTB3Q9H5J0 574 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 INTS4Q96HW7 963 aaKnown RBP15.63■□□□□ 0.09
MCF2L-225ENST00000480321 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 GNG11P61952 73 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 SPECC1LQ69YQ0 1117 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 ALDH1L1O75891 902 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 SYKP43405 635 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 RBM25P49756 843 aaKnown RBP15.63■□□□□ 0.09
MCF2L-225ENST00000480321 PIK3C2GO75747 1445 aa15.63■□□□□ 0.09
MCF2L-225ENST00000480321 C6orf229H3BNL8 230 aa15.62■□□□□ 0.09
MCF2L-225ENST00000480321 F13A1P00488 732 aa15.62■□□□□ 0.09
MCF2L-225ENST00000480321 MRPS27Q92552 414 aaKnown RBP15.62■□□□□ 0.09
MCF2L-225ENST00000480321 CWC25Q9NXE8 425 aaPredicted RBP15.62■□□□□ 0.09
MCF2L-225ENST00000480321 CPLX3Q8WVH0 158 aa15.62■□□□□ 0.09
MCF2L-225ENST00000480321 TIGD1Q96MW7 591 aa15.62■□□□□ 0.09
MCF2L-225ENST00000480321 GTF2F1P35269 517 aaKnown RBP eCLIP15.62■□□□□ 0.09
MCF2L-225ENST00000480321 USP48Q86UV5 1035 aa15.62■□□□□ 0.09
MCF2L-225ENST00000480321 CCDC172P0C7W6 258 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms