RNA–Protein interactions for RNA: ENST00000480181.1

CLIC3-202, Transcript of chloride intracellular channel 3, humanhuman

TSL 3

Gene CLIC3, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-202ENST00000480181 RBM17Q96I25 401 aaKnown RBP27.32■■□□□ 1.96
CLIC3-202ENST00000480181 TMX4Q9H1E5 349 aaPredicted RBP27.32■■□□□ 1.96
CLIC3-202ENST00000480181 KDM3BQ7LBC6 1761 aa27.32■■□□□ 1.96
CLIC3-202ENST00000480181 NUTM1Q86Y26 1132 aa27.31■■□□□ 1.96
CLIC3-202ENST00000480181 PLEKHF1Q96S99 279 aa27.31■■□□□ 1.96
CLIC3-202ENST00000480181 MYL6BP14649 208 aa27.3■■□□□ 1.96
CLIC3-202ENST00000480181 DDX10Q13206 875 aaKnown RBP27.3■■□□□ 1.96
CLIC3-202ENST00000480181 PPP1R42Q7Z4L9 355 aa27.3■■□□□ 1.96
CLIC3-202ENST00000480181 CRAMP1Q96RY5 1269 aa27.3■■□□□ 1.96
CLIC3-202ENST00000480181 NUP98P52948 1817 aa27.3■■□□□ 1.96
CLIC3-202ENST00000480181 LMOD1P29536 600 aaPredicted RBP27.29■■□□□ 1.96
CLIC3-202ENST00000480181 RNF123Q5XPI4 1314 aa27.29■■□□□ 1.96
CLIC3-202ENST00000480181 ABCC12Q96J65 1359 aa27.29■■□□□ 1.96
CLIC3-202ENST00000480181 DLG5Q8TDM6 1919 aa27.28■■□□□ 1.96
CLIC3-202ENST00000480181 PARP10Q53GL7 1025 aa27.28■■□□□ 1.96
CLIC3-202ENST00000480181 GIGYF2Q6Y7W6 1299 aaKnown RBP27.28■■□□□ 1.96
CLIC3-202ENST00000480181 TTLL7Q6ZT98 887 aa27.28■■□□□ 1.96
CLIC3-202ENST00000480181 CNTROBQ8N137 903 aa27.28■■□□□ 1.96
CLIC3-202ENST00000480181 PRDM10Q9NQV6 1147 aa27.28■■□□□ 1.96
CLIC3-202ENST00000480181 GPTP24298 496 aa27.27■■□□□ 1.96
CLIC3-202ENST00000480181 ZNF34Q8IZ26 560 aa27.27■■□□□ 1.96
CLIC3-202ENST00000480181 ZBTB3Q9H5J0 574 aa27.27■■□□□ 1.96
CLIC3-202ENST00000480181 SNED1Q8TER0 1413 aa27.26■■□□□ 1.95
CLIC3-202ENST00000480181 CTCFP49711 727 aaPredicted RBP27.26■■□□□ 1.95
CLIC3-202ENST00000480181 LARGE2Q8N3Y3 721 aa27.26■■□□□ 1.95
CLIC3-202ENST00000480181 VPS33BQ9H267 617 aa27.26■■□□□ 1.95
CLIC3-202ENST00000480181 ADAMTSL1Q8N6G6 1762 aa27.25■■□□□ 1.95
CLIC3-202ENST00000480181 VEGFBP49765 207 aa27.25■■□□□ 1.95
CLIC3-202ENST00000480181 SUSD4Q5VX71 490 aa27.25■■□□□ 1.95
CLIC3-202ENST00000480181 NLRP3Q96P20 1036 aa27.25■■□□□ 1.95
CLIC3-202ENST00000480181 BABAM1Q9NWV8 329 aa27.25■■□□□ 1.95
CLIC3-202ENST00000480181 GJA3Q9Y6H8 435 aa27.25■■□□□ 1.95
CLIC3-202ENST00000480181 UBN2Q6ZU65 1347 aa27.24■■□□□ 1.95
CLIC3-202ENST00000480181 PPEF1O14829 653 aaPredicted RBP27.24■■□□□ 1.95
CLIC3-202ENST00000480181 DEFB115Q30KQ5 88 aa27.24■■□□□ 1.95
CLIC3-202ENST00000480181 TSPYL4Q9UJ04 414 aa27.24■■□□□ 1.95
CLIC3-202ENST00000480181 RASSF10A6NK89 507 aa27.23■■□□□ 1.95
CLIC3-202ENST00000480181 FOXN1O15353 648 aa27.23■■□□□ 1.95
CLIC3-202ENST00000480181 MAP1SQ66K74 1059 aaPredicted RBP27.23■■□□□ 1.95
CLIC3-202ENST00000480181 NTSR2O95665 410 aa27.22■■□□□ 1.95
CLIC3-202ENST00000480181 NIM1KQ8IY84 436 aa27.22■■□□□ 1.95
CLIC3-202ENST00000480181 THUMPD2Q9BTF0 503 aaKnown RBP27.22■■□□□ 1.95
CLIC3-202ENST00000480181 LMOD3Q0VAK6 560 aa27.21■■□□□ 1.95
CLIC3-202ENST00000480181 SUPT20HQ8NEM7 779 aa27.21■■□□□ 1.95
CLIC3-202ENST00000480181 UTP14AQ9BVJ6 771 aaKnown RBP27.21■■□□□ 1.95
CLIC3-202ENST00000480181 ZNF316A6NFI3 1004 aaPredicted RBP27.2■■□□□ 1.94
CLIC3-202ENST00000480181 HSP90AB3PQ58FF7 597 aa27.2■■□□□ 1.94
CLIC3-202ENST00000480181 USP50Q70EL3 339 aaPredicted RBP27.2■■□□□ 1.94
CLIC3-202ENST00000480181 WBP1LQ9NX94 342 aa27.2■■□□□ 1.94
CLIC3-202ENST00000480181 MAP2K1Q02750 393 aaPredicted RBP27.19■■□□□ 1.94
CLIC3-202ENST00000480181 SLC10A5Q5PT55 438 aa27.19■■□□□ 1.94
CLIC3-202ENST00000480181 ABT1Q9ULW3 272 aaKnown RBP27.19■■□□□ 1.94
CLIC3-202ENST00000480181 DDX21Q9NR30 783 aaKnown RBP eCLIP27.18■■□□□ 1.94
CLIC3-202ENST00000480181 ATP6V0A2Q9Y487 856 aa27.18■■□□□ 1.94
CLIC3-202ENST00000480181 PPIP5K2O43314 1243 aa27.17■■□□□ 1.94
CLIC3-202ENST00000480181 RIPK4P57078 832 aa27.17■■□□□ 1.94
CLIC3-202ENST00000480181 BBOX1O75936 387 aa27.16■■□□□ 1.94
CLIC3-202ENST00000480181 EIF2S2P20042 333 aaKnown RBP27.16■■□□□ 1.94
CLIC3-202ENST00000480181 SCNN1DP51172 638 aa27.16■■□□□ 1.94
CLIC3-202ENST00000480181 WDR33Q9C0J8 1336 aaKnown RBP27.16■■□□□ 1.94
CLIC3-202ENST00000480181 TCERG1O14776 1098 aaKnown RBP27.15■■□□□ 1.94
CLIC3-202ENST00000480181 EPS15P42566 896 aa27.14■■□□□ 1.94
CLIC3-202ENST00000480181 ECE1P42892 770 aa27.14■■□□□ 1.94
CLIC3-202ENST00000480181 PDIA6Q15084 440 aa27.13■■□□□ 1.93
CLIC3-202ENST00000480181 RALBP1Q15311 655 aa27.13■■□□□ 1.93
CLIC3-202ENST00000480181 LRP10Q7Z4F1 713 aa27.13■■□□□ 1.93
CLIC3-202ENST00000480181 ADARB2Q9NS39 739 aaKnown RBP27.13■■□□□ 1.93
CLIC3-202ENST00000480181 ZNRF3Q9ULT6 936 aa27.13■■□□□ 1.93
CLIC3-202ENST00000480181 COL4A5P29400 1685 aa27.12■■□□□ 1.93
CLIC3-202ENST00000480181 RTFDC1Q9BY42 306 aaPredicted RBP27.12■■□□□ 1.93
CLIC3-202ENST00000480181 DPP8Q6V1X1 898 aaPredicted RBP27.11■■□□□ 1.93
CLIC3-202ENST00000480181 C3orf67Q6ZVT6 689 aa27.11■■□□□ 1.93
CLIC3-202ENST00000480181 SP8Q8IXZ3 490 aa27.11■■□□□ 1.93
CLIC3-202ENST00000480181 BEGAINQ9BUH8 593 aa27.11■■□□□ 1.93
CLIC3-202ENST00000480181 ABCC4O15439 1325 aa27.11■■□□□ 1.93
CLIC3-202ENST00000480181 AOC3Q16853 763 aa27.1■■□□□ 1.93
CLIC3-202ENST00000480181 DDX46Q7L014 1031 aaKnown RBP27.1■■□□□ 1.93
CLIC3-202ENST00000480181 TMC4Q7Z404 712 aa27.1■■□□□ 1.93
CLIC3-202ENST00000480181 GPRC5DQ9NZD1 345 aa27.1■■□□□ 1.93
CLIC3-202ENST00000480181 CDHR2Q9BYE9 1310 aa27.1■■□□□ 1.93
CLIC3-202ENST00000480181 LBX1P52954 281 aa27.09■■□□□ 1.93
CLIC3-202ENST00000480181 COPS6Q7L5N1 327 aa27.09■■□□□ 1.93
CLIC3-202ENST00000480181 TMPOP42166 694 aaKnown RBP27.08■■□□□ 1.93
CLIC3-202ENST00000480181 TNIP1Q15025 636 aa27.08■■□□□ 1.93
CLIC3-202ENST00000480181 NLRP10Q86W26 655 aa27.08■■□□□ 1.93
CLIC3-202ENST00000480181 MPNDQ8N594 471 aa27.08■■□□□ 1.93
CLIC3-202ENST00000480181 LTBP1Q14766 1721 aa27.07■■□□□ 1.92
CLIC3-202ENST00000480181 TCIRG1Q13488 830 aa27.07■■□□□ 1.92
CLIC3-202ENST00000480181 PAXIP1Q6ZW49 1069 aaPredicted RBP27.07■■□□□ 1.92
CLIC3-202ENST00000480181 TRMT112Q9UI30 125 aaKnown RBP27.07■■□□□ 1.92
CLIC3-202ENST00000480181 SH3TC1Q8TE82 1336 aa27.07■■□□□ 1.92
CLIC3-202ENST00000480181 CXCL9Q07325 125 aa27.06■■□□□ 1.92
CLIC3-202ENST00000480181 AIMP1Q12904 312 aaKnown RBP27.06■■□□□ 1.92
CLIC3-202ENST00000480181 PROSER3Q2NL68 480 aa27.06■■□□□ 1.92
CLIC3-202ENST00000480181 XAGE3Q8WTP9 111 aa27.06■■□□□ 1.92
CLIC3-202ENST00000480181 CAPNS2Q96L46 248 aa27.06■■□□□ 1.92
CLIC3-202ENST00000480181 HSPA8P11142 646 aaKnown RBP27.05■■□□□ 1.92
CLIC3-202ENST00000480181 KIAA2012Q0VF49 1180 aa27.05■■□□□ 1.92
CLIC3-202ENST00000480181 GRAPQ13588 217 aa27.05■■□□□ 1.92
CLIC3-202ENST00000480181 CIAPIN1Q6FI81 312 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms