RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 ZNF34Q8IZ26 560 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 RTKN2Q8IZC4 609 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 LAS1LQ9Y4W2 734 aaKnown RBP8.75□□□□□ -1.01
FN1-220ENST00000480024 COL4A5P29400 1685 aa8.75□□□□□ -1.01
FN1-220ENST00000480024 IQCA1LA6NCM1 817 aa8.74□□□□□ -1.01
FN1-220ENST00000480024 TCERG1O14776 1098 aaKnown RBP8.74□□□□□ -1.01
FN1-220ENST00000480024 IARSP41252 1262 aaKnown RBP8.74□□□□□ -1.01
FN1-220ENST00000480024 AIMP1Q12904 312 aaKnown RBP8.74□□□□□ -1.01
FN1-220ENST00000480024 CHADLQ6NUI6 762 aa8.74□□□□□ -1.01
FN1-220ENST00000480024 C3orf67Q6ZVT6 689 aa8.74□□□□□ -1.01
FN1-220ENST00000480024 RUNDC1Q96C34 613 aa8.74□□□□□ -1.01
FN1-220ENST00000480024 L3MBTL3Q96JM7 780 aaPredicted RBP8.74□□□□□ -1.01
FN1-220ENST00000480024 BABAM1Q9NWV8 329 aa8.74□□□□□ -1.01
FN1-220ENST00000480024 PCNTO95613 3336 aa8.74□□□□□ -1.01
FN1-220ENST00000480024 PPEF1O14829 653 aaPredicted RBP8.73□□□□□ -1.01
FN1-220ENST00000480024 HOXA10P31260 410 aaPredicted RBP8.73□□□□□ -1.01
FN1-220ENST00000480024 PARP10Q53GL7 1025 aa8.73□□□□□ -1.01
FN1-220ENST00000480024 EAPPQ56P03 285 aaPredicted RBP8.73□□□□□ -1.01
FN1-220ENST00000480024 PPP1R42Q7Z4L9 355 aa8.73□□□□□ -1.01
FN1-220ENST00000480024 SYNE4Q8N205 404 aa8.73□□□□□ -1.01
FN1-220ENST00000480024 JMYQ8N9B5 988 aa8.73□□□□□ -1.01
FN1-220ENST00000480024 XAGE3Q8WTP9 111 aa8.73□□□□□ -1.01
FN1-220ENST00000480024 UTP14AQ9BVJ6 771 aaKnown RBP8.73□□□□□ -1.01
FN1-220ENST00000480024 CHPF2Q9P2E5 772 aa8.73□□□□□ -1.01
FN1-220ENST00000480024 ADAMTS8Q9UP79 889 aa8.73□□□□□ -1.01
FN1-220ENST00000480024 TRIM35Q9UPQ4 493 aa8.73□□□□□ -1.01
FN1-220ENST00000480024 RNF123Q5XPI4 1314 aa8.73□□□□□ -1.01
FN1-220ENST00000480024 ADAMTSL1Q8N6G6 1762 aa8.73□□□□□ -1.01
FN1-220ENST00000480024 TAF1P21675 1872 aa8.72□□□□□ -1.01
FN1-220ENST00000480024 DDX60Q8IY21 1712 aaKnown RBP8.72□□□□□ -1.01
FN1-220ENST00000480024 CHL1O00533 1208 aa8.72□□□□□ -1.01
FN1-220ENST00000480024 HDGFL1Q5TGJ6 251 aa8.72□□□□□ -1.01
FN1-220ENST00000480024 COPS6Q7L5N1 327 aa8.72□□□□□ -1.01
FN1-220ENST00000480024 ZNF428Q96B54 188 aa8.72□□□□□ -1.01
FN1-220ENST00000480024 RBM17Q96I25 401 aaKnown RBP8.72□□□□□ -1.01
FN1-220ENST00000480024 PSMD1Q99460 953 aa8.72□□□□□ -1.01
FN1-220ENST00000480024 TAF1DQ9H5J8 278 aaPredicted RBP8.72□□□□□ -1.01
FN1-220ENST00000480024 ABCC4O15439 1325 aa8.72□□□□□ -1.01
FN1-220ENST00000480024 FZD9O00144 591 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 HCLS1P14317 486 aaPredicted RBP8.71□□□□□ -1.02
FN1-220ENST00000480024 HSP90AB3PQ58FF7 597 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 CC2D2BQ6DHV5 1058 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 LDHDQ86WU2 507 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 LARGE2Q8N3Y3 721 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 JDP2Q8WYK2 163 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 NLRP3Q96P20 1036 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 CRAMP1Q96RY5 1269 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 PRKRIP1Q9H875 184 aaPredicted RBP8.71□□□□□ -1.02
FN1-220ENST00000480024 DDX21Q9NR30 783 aaKnown RBP eCLIP8.71□□□□□ -1.02
FN1-220ENST00000480024 HACL1Q9UJ83 578 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 GJA3Q9Y6H8 435 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 LTBP1Q14766 1721 aa8.71□□□□□ -1.02
FN1-220ENST00000480024 EPHX2P34913 555 aa8.7□□□□□ -1.02
FN1-220ENST00000480024 EIF6P56537 245 aaKnown RBP8.7□□□□□ -1.02
FN1-220ENST00000480024 NLRP10Q86W26 655 aa8.7□□□□□ -1.02
FN1-220ENST00000480024 GPC2Q8N158 579 aa8.7□□□□□ -1.02
FN1-220ENST00000480024 CREBZFQ9NS37 354 aa8.7□□□□□ -1.02
FN1-220ENST00000480024 MBIPQ9NS73 344 aa8.7□□□□□ -1.02
FN1-220ENST00000480024 MKRN1Q9UHC7 482 aaKnown RBP8.7□□□□□ -1.02
FN1-220ENST00000480024 TRMT112Q9UI30 125 aaKnown RBP8.7□□□□□ -1.02
FN1-220ENST00000480024 SH3TC1Q8TE82 1336 aa8.7□□□□□ -1.02
FN1-220ENST00000480024 LRRC37AA6NMS7 1700 aa8.69□□□□□ -1.02
FN1-220ENST00000480024 PPIP5K2O43314 1243 aa8.69□□□□□ -1.02
FN1-220ENST00000480024 HSPA1AP0DMV8 641 aaKnown RBP8.69□□□□□ -1.02
FN1-220ENST00000480024 HSPA1BP0DMV9 641 aaKnown RBP8.69□□□□□ -1.02
FN1-220ENST00000480024 TCIRG1Q13488 830 aa8.69□□□□□ -1.02
FN1-220ENST00000480024 AOC3Q16853 763 aa8.69□□□□□ -1.02
FN1-220ENST00000480024 GRIPAP1Q4V328 841 aa8.69□□□□□ -1.02
FN1-220ENST00000480024 NIM1KQ8IY84 436 aa8.69□□□□□ -1.02
FN1-220ENST00000480024 CFAP44Q96MT7 982 aa8.69□□□□□ -1.02
FN1-220ENST00000480024 TMX4Q9H1E5 349 aaPredicted RBP8.69□□□□□ -1.02
FN1-220ENST00000480024 DBF4Q9UBU7 674 aaPredicted RBP8.69□□□□□ -1.02
FN1-220ENST00000480024 CLEC11AQ9Y240 323 aa8.69□□□□□ -1.02
FN1-220ENST00000480024 APAF1O14727 1248 aa8.68□□□□□ -1.02
FN1-220ENST00000480024 HOXB7P09629 217 aa8.68□□□□□ -1.02
FN1-220ENST00000480024 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
FN1-220ENST00000480024 SLC10A5Q5PT55 438 aa8.68□□□□□ -1.02
FN1-220ENST00000480024 COL13A1Q5TAT6 717 aaPredicted RBP8.68□□□□□ -1.02
FN1-220ENST00000480024 DUSP27Q5VZP5 1158 aa8.68□□□□□ -1.02
FN1-220ENST00000480024 MAP1SQ66K74 1059 aaPredicted RBP8.68□□□□□ -1.02
FN1-220ENST00000480024 PNMA8AQ86V59 439 aaPredicted RBP8.68□□□□□ -1.02
FN1-220ENST00000480024 PLBD2Q8NHP8 589 aa8.68□□□□□ -1.02
FN1-220ENST00000480024 ATP6V0A2Q9Y487 856 aa8.68□□□□□ -1.02
FN1-220ENST00000480024 PASKQ96RG2 1323 aa8.68□□□□□ -1.02
FN1-220ENST00000480024 DUOX1Q9NRD9 1551 aa8.68□□□□□ -1.02
FN1-220ENST00000480024 COL4A1P02462 1669 aa8.68□□□□□ -1.02
FN1-220ENST00000480024 ATP5J2-PTCD1G3V325 749 aa8.67□□□□□ -1.02
FN1-220ENST00000480024 ELL2O00472 640 aaPredicted RBP8.67□□□□□ -1.02
FN1-220ENST00000480024 EPS15P42566 896 aa8.67□□□□□ -1.02
FN1-220ENST00000480024 SCNN1DP51172 638 aa8.67□□□□□ -1.02
FN1-220ENST00000480024 CNTNAP1P78357 1384 aa8.67□□□□□ -1.02
FN1-220ENST00000480024 GRAPQ13588 217 aa8.67□□□□□ -1.02
FN1-220ENST00000480024 RTL5Q5HYW3 569 aaPredicted RBP8.67□□□□□ -1.02
FN1-220ENST00000480024 DPP8Q6V1X1 898 aaPredicted RBP8.67□□□□□ -1.02
FN1-220ENST00000480024 ANKRD13DQ6ZTN6 518 aa8.67□□□□□ -1.02
FN1-220ENST00000480024 DDX46Q7L014 1031 aaKnown RBP8.67□□□□□ -1.02
FN1-220ENST00000480024 GRAPLQ8TC17 118 aaPredicted RBP8.67□□□□□ -1.02
FN1-220ENST00000480024 FAM89AQ96GI7 184 aa8.67□□□□□ -1.02
FN1-220ENST00000480024 IFT57Q9NWB7 429 aa8.67□□□□□ -1.02
FN1-220ENST00000480024 HYPKQ9NX55 129 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms