RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 KDRP35968 1356 aa15.35■□□□□ 0.05
LYSMD4-206ENST00000479791 ZNF592Q92610 1267 aa15.35■□□□□ 0.05
LYSMD4-206ENST00000479791 DNAJC25Q9H1X3 360 aa15.35■□□□□ 0.05
LYSMD4-206ENST00000479791 SRGAP3O43295 1099 aa15.35■□□□□ 0.05
LYSMD4-206ENST00000479791 PSMA5P28066 241 aa15.35■□□□□ 0.05
LYSMD4-206ENST00000479791 ANKRD1Q15327 319 aa15.35■□□□□ 0.05
LYSMD4-206ENST00000479791 USP31Q70CQ4 1352 aa15.34■□□□□ 0.05
LYSMD4-206ENST00000479791 A2ML1A8K2U0 1454 aa15.34■□□□□ 0.05
LYSMD4-206ENST00000479791 GIGYF1O75420 1035 aaPredicted RBP15.34■□□□□ 0.05
LYSMD4-206ENST00000479791 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
LYSMD4-206ENST00000479791 FAM173BQ6P4H8 233 aa15.34■□□□□ 0.05
LYSMD4-206ENST00000479791 NR1I2O75469 434 aa15.34■□□□□ 0.05
LYSMD4-206ENST00000479791 ALDH8A1Q9H2A2 487 aaPredicted RBP15.34■□□□□ 0.05
LYSMD4-206ENST00000479791 LRRC37A3O60309 1634 aa15.33■□□□□ 0.05
LYSMD4-206ENST00000479791 GOLGA6L19H0YKK7 550 aa15.33■□□□□ 0.05
LYSMD4-206ENST00000479791 KIF2AO00139 706 aaPredicted RBP15.33■□□□□ 0.05
LYSMD4-206ENST00000479791 DTNBO60941 627 aa15.33■□□□□ 0.05
LYSMD4-206ENST00000479791 IQCB1Q15051 598 aa15.33■□□□□ 0.05
LYSMD4-206ENST00000479791 NALCNQ8IZF0 1738 aa15.33■□□□□ 0.05
LYSMD4-206ENST00000479791 BABAM1Q9NWV8 329 aa15.33■□□□□ 0.05
LYSMD4-206ENST00000479791 SKILP12757 684 aa15.33■□□□□ 0.04
LYSMD4-206ENST00000479791 CREB3L3Q68CJ9 461 aa15.33■□□□□ 0.04
LYSMD4-206ENST00000479791 FBXO38Q6PIJ6 1188 aa15.33■□□□□ 0.04
LYSMD4-206ENST00000479791 TIGD1Q96MW7 591 aa15.33■□□□□ 0.04
LYSMD4-206ENST00000479791 TFIP11Q9UBB9 837 aaKnown RBP15.33■□□□□ 0.04
LYSMD4-206ENST00000479791 PRR36Q9H6K5 1346 aa15.32■□□□□ 0.04
LYSMD4-206ENST00000479791 USP27XA6NNY8 438 aa15.32■□□□□ 0.04
LYSMD4-206ENST00000479791 SLU7O95391 586 aaKnown RBP15.32■□□□□ 0.04
LYSMD4-206ENST00000479791 BICD2Q8TD16 824 aa15.32■□□□□ 0.04
LYSMD4-206ENST00000479791 NECTIN2Q92692 538 aa15.32■□□□□ 0.04
LYSMD4-206ENST00000479791 MAP4K1Q92918 833 aa15.32■□□□□ 0.04
LYSMD4-206ENST00000479791 PGBD1Q96JS3 809 aa15.32■□□□□ 0.04
LYSMD4-206ENST00000479791 CALCOCO1Q9P1Z2 691 aa15.32■□□□□ 0.04
LYSMD4-206ENST00000479791 RBM8AQ9Y5S9 174 aaKnown RBP15.32■□□□□ 0.04
LYSMD4-206ENST00000479791 TECPR2O15040 1411 aa15.31■□□□□ 0.04
LYSMD4-206ENST00000479791 TXNDC2Q86VQ3 553 aa15.31■□□□□ 0.04
LYSMD4-206ENST00000479791 RICTORQ6R327 1708 aa15.31■□□□□ 0.04
LYSMD4-206ENST00000479791 EVI5LQ96CN4 794 aa15.31■□□□□ 0.04
LYSMD4-206ENST00000479791 ECHDC1Q9NTX5 307 aa15.31■□□□□ 0.04
LYSMD4-206ENST00000479791 METP08581 1390 aa15.31■□□□□ 0.04
LYSMD4-206ENST00000479791 CTAGE5O15320 804 aa15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 ELF2Q15723 593 aa15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 LARP1Q6PKG0 1096 aaKnown RBP15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 CCAR2Q8N163 923 aaKnown RBP15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 CLASRPQ8N2M8 674 aaKnown RBP15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 GPATCH3Q96I76 525 aa15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 SNRKQ9NRH2 765 aa15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 HIP1O00291 1037 aa15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 KCNJ4P48050 445 aa15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 CCZ1BP86790 482 aa15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 CCZ1P86791 482 aaPredicted RBP15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 SLC20A2Q08357 652 aa15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 NRXN3Q9Y4C0 1643 aa15.3■□□□□ 0.04
LYSMD4-206ENST00000479791 IGSF1Q8N6C5 1336 aa15.29■□□□□ 0.04
LYSMD4-206ENST00000479791 RIMS1Q86UR5 1692 aaKnown RBP15.29■□□□□ 0.04
LYSMD4-206ENST00000479791 GNAT3A8MTJ3 354 aa15.29■□□□□ 0.04
LYSMD4-206ENST00000479791 IRX5P78411 483 aaPredicted RBP15.29■□□□□ 0.04
LYSMD4-206ENST00000479791 BMS1Q14692 1282 aaKnown RBP15.29■□□□□ 0.04
LYSMD4-206ENST00000479791 BLOC1S2Q6QNY1 142 aa15.29■□□□□ 0.04
LYSMD4-206ENST00000479791 CCDC69A6NI79 296 aa15.29■□□□□ 0.04
LYSMD4-206ENST00000479791 SLC27A2O14975 620 aa15.29■□□□□ 0.04
LYSMD4-206ENST00000479791 STX1AQ16623 288 aa15.29■□□□□ 0.04
LYSMD4-206ENST00000479791 NBPF7P0C2Y1 421 aaPredicted RBP15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 ARID5BQ14865 1188 aa15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 CFAP45Q9UL16 551 aa15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 ERBB3P21860 1342 aa15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 H2AFXP16104 143 aaPredicted RBP15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 RPS6KB1P23443 525 aa15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 GSDMDP57764 484 aa15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 HDGFL1Q5TGJ6 251 aa15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 DDX54Q8TDD1 881 aaKnown RBP15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 L2HGDHQ9H9P8 463 aa15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 FLT4P35916 1363 aa15.28■□□□□ 0.04
LYSMD4-206ENST00000479791 CDK11BP21127 795 aaKnown RBP15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 MTX1Q13505 466 aa15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 ZSCAN16Q9H4T2 348 aaPredicted RBP15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 PHAXQ9H814 394 aaKnown RBP15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 V9GYY5 206 aaPredicted RBP15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 ACEP12821 1306 aa15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 SBNO1A3KN83 1393 aa15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 USP6P35125 1406 aa15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 FMN2Q9NZ56 1722 aa15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 PLEKHG3A1L390 1219 aa15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 OS9Q13438 667 aaPredicted RBP15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 TOB2Q14106 344 aaPredicted RBP15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 C11orf57Q6ZUT1 292 aaPredicted RBP15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 ZNF446Q9NWS9 450 aa15.27■□□□□ 0.04
LYSMD4-206ENST00000479791 RESTQ13127 1097 aa15.27■□□□□ 0.03
LYSMD4-206ENST00000479791 EYA1Q99502 592 aa15.27■□□□□ 0.03
LYSMD4-206ENST00000479791 BECN2A8MW95 431 aa15.26■□□□□ 0.03
LYSMD4-206ENST00000479791 TULP2O00295 520 aa15.26■□□□□ 0.03
LYSMD4-206ENST00000479791 ADCY9O60503 1353 aa15.26■□□□□ 0.03
LYSMD4-206ENST00000479791 TUBB4AP04350 444 aa15.26■□□□□ 0.03
LYSMD4-206ENST00000479791 TSGA10IPQ3SY00 556 aa15.26■□□□□ 0.03
LYSMD4-206ENST00000479791 BEND3Q5T5X7 828 aa15.26■□□□□ 0.03
LYSMD4-206ENST00000479791 ERC1Q8IUD2 1116 aa15.26■□□□□ 0.03
LYSMD4-206ENST00000479791 USP16Q9Y5T5 823 aa15.26■□□□□ 0.03
LYSMD4-206ENST00000479791 CEP170BQ9Y4F5 1589 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms