RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 COL11A2P13942 1736 aaPredicted RBP11.54□□□□□ -0.56
DDX56-211ENST00000479602 PASKQ96RG2 1323 aa11.54□□□□□ -0.56
DDX56-211ENST00000479602 ITGBL1O95965 494 aaPredicted RBP11.53□□□□□ -0.56
DDX56-211ENST00000479602 ALDH1B1P30837 517 aa11.53□□□□□ -0.56
DDX56-211ENST00000479602 FKBP4Q02790 459 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX56-211ENST00000479602 CCDC93Q567U6 631 aa11.53□□□□□ -0.56
DDX56-211ENST00000479602 CHADLQ6NUI6 762 aa11.53□□□□□ -0.56
DDX56-211ENST00000479602 TTLL7Q6ZT98 887 aa11.53□□□□□ -0.56
DDX56-211ENST00000479602 RTKN2Q8IZC4 609 aa11.53□□□□□ -0.56
DDX56-211ENST00000479602 TSPYL4Q9UJ04 414 aa11.53□□□□□ -0.56
DDX56-211ENST00000479602 MAP3K15Q6ZN16 1313 aa11.53□□□□□ -0.56
DDX56-211ENST00000479602 IBTKQ9P2D0 1353 aaPredicted RBP11.53□□□□□ -0.56
DDX56-211ENST00000479602 BCORQ6W2J9 1755 aa11.52□□□□□ -0.57
DDX56-211ENST00000479602 SLFN5Q08AF3 891 aa11.52□□□□□ -0.57
DDX56-211ENST00000479602 SLC10A5Q5PT55 438 aa11.52□□□□□ -0.57
DDX56-211ENST00000479602 PSMD1Q99460 953 aa11.52□□□□□ -0.57
DDX56-211ENST00000479602 THUMPD2Q9BTF0 503 aaKnown RBP11.52□□□□□ -0.57
DDX56-211ENST00000479602 TAF1DQ9H5J8 278 aaPredicted RBP11.52□□□□□ -0.57
DDX56-211ENST00000479602 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
DDX56-211ENST00000479602 FANCIQ9NVI1 1328 aa11.52□□□□□ -0.57
DDX56-211ENST00000479602 DICER1Q9UPY3 1922 aaKnown RBP11.52□□□□□ -0.57
DDX56-211ENST00000479602 SUSD4Q5VX71 490 aa11.51□□□□□ -0.57
DDX56-211ENST00000479602 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
DDX56-211ENST00000479602 CREBZFQ9NS37 354 aa11.51□□□□□ -0.57
DDX56-211ENST00000479602 UBN2Q6ZU65 1347 aa11.51□□□□□ -0.57
DDX56-211ENST00000479602 RIC1Q4ADV7 1423 aa11.51□□□□□ -0.57
DDX56-211ENST00000479602 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
DDX56-211ENST00000479602 BRPF1P55201 1214 aaPredicted RBP11.5□□□□□ -0.57
DDX56-211ENST00000479602 NEUROD2Q15784 382 aa11.5□□□□□ -0.57
DDX56-211ENST00000479602 CC2D2BQ6DHV5 1058 aa11.5□□□□□ -0.57
DDX56-211ENST00000479602 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
DDX56-211ENST00000479602 CRAMP1Q96RY5 1269 aa11.5□□□□□ -0.57
DDX56-211ENST00000479602 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
DDX56-211ENST00000479602 ABCC12Q96J65 1359 aa11.5□□□□□ -0.57
DDX56-211ENST00000479602 IQCA1LA6NCM1 817 aa11.49□□□□□ -0.57
DDX56-211ENST00000479602 NTSR2O95665 410 aa11.49□□□□□ -0.57
DDX56-211ENST00000479602 HNRNPUQ00839 825 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDX56-211ENST00000479602 DUSP27Q5VZP5 1158 aa11.49□□□□□ -0.57
DDX56-211ENST00000479602 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
DDX56-211ENST00000479602 LDHDQ86WU2 507 aa11.49□□□□□ -0.57
DDX56-211ENST00000479602 NUTM1Q86Y26 1132 aa11.49□□□□□ -0.57
DDX56-211ENST00000479602 NYXQ9GZU5 481 aa11.49□□□□□ -0.57
DDX56-211ENST00000479602 ZNF541Q9H0D2 1346 aa11.49□□□□□ -0.57
DDX56-211ENST00000479602 IARSP41252 1262 aaKnown RBP11.48□□□□□ -0.57
DDX56-211ENST00000479602 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
DDX56-211ENST00000479602 ARFGEF2Q9Y6D5 1785 aa11.47□□□□□ -0.57
DDX56-211ENST00000479602 FAM177BA6PVY3 158 aa11.47□□□□□ -0.57
DDX56-211ENST00000479602 NPHP1O15259 732 aa11.47□□□□□ -0.57
DDX56-211ENST00000479602 SLC51AQ86UW1 340 aa11.47□□□□□ -0.57
DDX56-211ENST00000479602 GPC2Q8N158 579 aa11.47□□□□□ -0.57
DDX56-211ENST00000479602 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
DDX56-211ENST00000479602 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.57
DDX56-211ENST00000479602 HSPA1AP0DMV8 641 aaKnown RBP11.46□□□□□ -0.57
DDX56-211ENST00000479602 HSPA1BP0DMV9 641 aaKnown RBP11.46□□□□□ -0.57
DDX56-211ENST00000479602 MYL6BP14649 208 aa11.46□□□□□ -0.57
DDX56-211ENST00000479602 PROSER3Q2NL68 480 aa11.46□□□□□ -0.57
DDX56-211ENST00000479602 PARP10Q53GL7 1025 aa11.46□□□□□ -0.57
DDX56-211ENST00000479602 RTFDC1Q9BY42 306 aaPredicted RBP11.46□□□□□ -0.57
DDX56-211ENST00000479602 VPS33BQ9H267 617 aa11.46□□□□□ -0.57
DDX56-211ENST00000479602 HACL1Q9UJ83 578 aa11.46□□□□□ -0.57
DDX56-211ENST00000479602 COL4A5P29400 1685 aa11.46□□□□□ -0.58
DDX56-211ENST00000479602 GPTP24298 496 aa11.45□□□□□ -0.58
DDX56-211ENST00000479602 GTF2E1P29083 439 aaPredicted RBP11.45□□□□□ -0.58
DDX56-211ENST00000479602 EPHX2P34913 555 aa11.45□□□□□ -0.58
DDX56-211ENST00000479602 ALDH1L2Q3SY69 923 aa11.45□□□□□ -0.58
DDX56-211ENST00000479602 PNMA8AQ86V59 439 aaPredicted RBP11.45□□□□□ -0.58
DDX56-211ENST00000479602 ZBTB3Q9H5J0 574 aa11.45□□□□□ -0.58
DDX56-211ENST00000479602 DDX21Q9NR30 783 aaKnown RBP eCLIP11.45□□□□□ -0.58
DDX56-211ENST00000479602 DBF4Q9UBU7 674 aaPredicted RBP11.45□□□□□ -0.58
DDX56-211ENST00000479602 ADAMTSL1Q8N6G6 1762 aa11.44□□□□□ -0.58
DDX56-211ENST00000479602 CNTNAP1P78357 1384 aa11.44□□□□□ -0.58
DDX56-211ENST00000479602 VAMP4O75379 141 aa11.44□□□□□ -0.58
DDX56-211ENST00000479602 SCNN1DP51172 638 aa11.44□□□□□ -0.58
DDX56-211ENST00000479602 TWISTNBQ3B726 338 aaPredicted RBP11.44□□□□□ -0.58
DDX56-211ENST00000479602 KIF6Q6ZMV9 814 aa11.44□□□□□ -0.58
DDX56-211ENST00000479602 ATP6V0A2Q9Y487 856 aa11.44□□□□□ -0.58
DDX56-211ENST00000479602 SCN4AP35499 1836 aa11.44□□□□□ -0.58
DDX56-211ENST00000479602 RNF123Q5XPI4 1314 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 CACNA1SQ13698 1873 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 RASSF10A6NK89 507 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 TMEM88BA6NKF7 163 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 BBOX1O75936 387 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 TCIRG1Q13488 830 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 HDGFL1Q5TGJ6 251 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 CCDC30Q5VVM6 783 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 COPS6Q7L5N1 327 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 PPP1R42Q7Z4L9 355 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 NLRP10Q86W26 655 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 CNTROBQ8N137 903 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 C8orf58Q8NAV2 365 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 TSR2Q969E8 191 aaKnown RBP11.43□□□□□ -0.58
DDX56-211ENST00000479602 RBM17Q96I25 401 aaKnown RBP11.43□□□□□ -0.58
DDX56-211ENST00000479602 NLRP3Q96P20 1036 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 UTP14AQ9BVJ6 771 aaKnown RBP11.43□□□□□ -0.58
DDX56-211ENST00000479602 NUP98P52948 1817 aa11.43□□□□□ -0.58
DDX56-211ENST00000479602 ANKRD36CQ5JPF3 1778 aa11.42□□□□□ -0.58
DDX56-211ENST00000479602 ANXA1P04083 346 aa11.42□□□□□ -0.58
DDX56-211ENST00000479602 EPS15P42566 896 aa11.42□□□□□ -0.58
DDX56-211ENST00000479602 VEGFBP49765 207 aa11.42□□□□□ -0.58
DDX56-211ENST00000479602 SP8Q8IXZ3 490 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms