RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 CRKLP46109 303 aaKnown RBP13.41□□□□□ -0.26
CDK11A-216ENST00000479362 TTC5Q8N0Z6 440 aa13.4□□□□□ -0.26
CDK11A-216ENST00000479362 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
CDK11A-216ENST00000479362 EXOSC9Q06265 439 aaKnown RBP13.39□□□□□ -0.27
CDK11A-216ENST00000479362 SLC39A6Q13433 755 aa13.39□□□□□ -0.27
CDK11A-216ENST00000479362 ZNF790Q6PG37 636 aa13.39□□□□□ -0.27
CDK11A-216ENST00000479362 C2CD5Q86YS7 1000 aa13.39□□□□□ -0.27
CDK11A-216ENST00000479362 BEGAINQ9BUH8 593 aa13.39□□□□□ -0.27
CDK11A-216ENST00000479362 LTBP3Q9NS15 1303 aa13.39□□□□□ -0.27
CDK11A-216ENST00000479362 KCNQ3O43525 872 aa13.38□□□□□ -0.27
CDK11A-216ENST00000479362 NFIXQ14938 502 aa13.38□□□□□ -0.27
CDK11A-216ENST00000479362 EAPPQ56P03 285 aaPredicted RBP13.38□□□□□ -0.27
CDK11A-216ENST00000479362 CAPNS2Q96L46 248 aa13.38□□□□□ -0.27
CDK11A-216ENST00000479362 ABT1Q9ULW3 272 aaKnown RBP13.38□□□□□ -0.27
CDK11A-216ENST00000479362 SLX4Q8IY92 1834 aa13.37□□□□□ -0.27
CDK11A-216ENST00000479362 C21orf2O43822 256 aa13.37□□□□□ -0.27
CDK11A-216ENST00000479362 EIF4A1P60842 406 aaKnown RBP13.37□□□□□ -0.27
CDK11A-216ENST00000479362 USPL1Q5W0Q7 1092 aa13.37□□□□□ -0.27
CDK11A-216ENST00000479362 MAP1SQ66K74 1059 aaPredicted RBP13.37□□□□□ -0.27
CDK11A-216ENST00000479362 TRPM7Q96QT4 1865 aa13.37□□□□□ -0.27
CDK11A-216ENST00000479362 ARFGEF2Q9Y6D5 1785 aa13.37□□□□□ -0.27
CDK11A-216ENST00000479362 H0YIN7 160 aa13.36□□□□□ -0.27
CDK11A-216ENST00000479362 CT47B1P0C2W7 299 aaPredicted RBP13.36□□□□□ -0.27
CDK11A-216ENST00000479362 KRT24Q2M2I5 525 aa13.36□□□□□ -0.27
CDK11A-216ENST00000479362 TWISTNBQ3B726 338 aaPredicted RBP13.36□□□□□ -0.27
CDK11A-216ENST00000479362 CNTROBQ8N137 903 aa13.36□□□□□ -0.27
CDK11A-216ENST00000479362 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
CDK11A-216ENST00000479362 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
CDK11A-216ENST00000479362 TAOK3Q9H2K8 898 aa13.36□□□□□ -0.27
CDK11A-216ENST00000479362 MKI67P46013 3256 aaKnown RBP13.36□□□□□ -0.27
CDK11A-216ENST00000479362 HEG1Q9ULI3 1381 aa13.35□□□□□ -0.27
CDK11A-216ENST00000479362 CACNA1FO60840 1977 aa13.35□□□□□ -0.27
CDK11A-216ENST00000479362 SOX10P56693 466 aa13.35□□□□□ -0.27
CDK11A-216ENST00000479362 DGKZQ13574 1117 aa13.35□□□□□ -0.27
CDK11A-216ENST00000479362 CYP4F22Q6NT55 531 aa13.35□□□□□ -0.27
CDK11A-216ENST00000479362 INTS5Q6P9B9 1019 aaKnown RBP13.35□□□□□ -0.27
CDK11A-216ENST00000479362 TSPYL6Q8N831 410 aa13.35□□□□□ -0.27
CDK11A-216ENST00000479362 C8orf58Q8NAV2 365 aa13.35□□□□□ -0.27
CDK11A-216ENST00000479362 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
CDK11A-216ENST00000479362 SOS1Q07889 1333 aaPredicted RBP13.35□□□□□ -0.27
CDK11A-216ENST00000479362 ELL2O00472 640 aaPredicted RBP13.34□□□□□ -0.27
CDK11A-216ENST00000479362 PTCD1O75127 700 aaKnown RBP13.34□□□□□ -0.27
CDK11A-216ENST00000479362 ZPR1O75312 459 aa13.34□□□□□ -0.27
CDK11A-216ENST00000479362 SERPINB2P05120 415 aa13.34□□□□□ -0.27
CDK11A-216ENST00000479362 HOXB7P09629 217 aa13.34□□□□□ -0.27
CDK11A-216ENST00000479362 DDX21Q9NR30 783 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDK11A-216ENST00000479362 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
CDK11A-216ENST00000479362 ZNF541Q9H0D2 1346 aa13.34□□□□□ -0.27
CDK11A-216ENST00000479362 AOC2O75106 756 aa13.33□□□□□ -0.28
CDK11A-216ENST00000479362 EPHX2P34913 555 aa13.33□□□□□ -0.28
CDK11A-216ENST00000479362 ECE1P42892 770 aa13.33□□□□□ -0.28
CDK11A-216ENST00000479362 GRM1Q13255 1194 aa13.33□□□□□ -0.28
CDK11A-216ENST00000479362 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
CDK11A-216ENST00000479362 HACL1Q9UJ83 578 aa13.33□□□□□ -0.28
CDK11A-216ENST00000479362 VAMP4O75379 141 aa13.32□□□□□ -0.28
CDK11A-216ENST00000479362 SNRPA1P09661 255 aaKnown RBP13.32□□□□□ -0.28
CDK11A-216ENST00000479362 FMR1Q06787 632 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDK11A-216ENST00000479362 PAXIP1Q6ZW49 1069 aaPredicted RBP13.32□□□□□ -0.28
CDK11A-216ENST00000479362 RCAN3Q9UKA8 241 aa13.32□□□□□ -0.28
CDK11A-216ENST00000479362 CA12O43570 354 aa13.31□□□□□ -0.28
CDK11A-216ENST00000479362 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
CDK11A-216ENST00000479362 ZNF622Q969S3 477 aaKnown RBP eCLIP13.31□□□□□ -0.281e-9■■■■□ 26.3
CDK11A-216ENST00000479362 ZNF428Q96B54 188 aa13.31□□□□□ -0.28
CDK11A-216ENST00000479362 PRAMEF22A3QJZ6 481 aa13.3□□□□□ -0.28
CDK11A-216ENST00000479362 MAP2K2P36507 400 aa13.3□□□□□ -0.28
CDK11A-216ENST00000479362 HDGFL1Q5TGJ6 251 aa13.3□□□□□ -0.28
CDK11A-216ENST00000479362 PNMA8AQ86V59 439 aaPredicted RBP13.3□□□□□ -0.28
CDK11A-216ENST00000479362 CHMP4AQ9BY43 222 aa13.3□□□□□ -0.28
CDK11A-216ENST00000479362 NARFQ9UHQ1 456 aa13.3□□□□□ -0.28
CDK11A-216ENST00000479362 RNF123Q5XPI4 1314 aa13.3□□□□□ -0.28
CDK11A-216ENST00000479362 COL15A1P39059 1388 aa13.3□□□□□ -0.28
CDK11A-216ENST00000479362 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
CDK11A-216ENST00000479362 RARSP54136 660 aaKnown RBP13.29□□□□□ -0.28
CDK11A-216ENST00000479362 ALDH1L2Q3SY69 923 aa13.29□□□□□ -0.28
CDK11A-216ENST00000479362 CCDC30Q5VVM6 783 aa13.29□□□□□ -0.28
CDK11A-216ENST00000479362 CST9Q5W186 159 aa13.29□□□□□ -0.28
CDK11A-216ENST00000479362 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
CDK11A-216ENST00000479362 SZT2Q5T011 3432 aa13.29□□□□□ -0.28
CDK11A-216ENST00000479362 DNAJC10Q8IXB1 793 aa13.28□□□□□ -0.28
CDK11A-216ENST00000479362 SSH1Q8WYL5 1049 aa13.28□□□□□ -0.28
CDK11A-216ENST00000479362 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
CDK11A-216ENST00000479362 BCL2L13Q9BXK5 485 aa13.28□□□□□ -0.28
CDK11A-216ENST00000479362 STK31Q9BXU1 1019 aa13.28□□□□□ -0.28
CDK11A-216ENST00000479362 TEX13AQ9BXU3 409 aaPredicted RBP13.28□□□□□ -0.28
CDK11A-216ENST00000479362 SMC4Q9NTJ3 1288 aa13.28□□□□□ -0.28
CDK11A-216ENST00000479362 TLL2Q9Y6L7 1015 aa13.28□□□□□ -0.28
CDK11A-216ENST00000479362 SCN7AQ01118 1682 aa13.28□□□□□ -0.28
CDK11A-216ENST00000479362 TCERG1O14776 1098 aaKnown RBP13.27□□□□□ -0.29
CDK11A-216ENST00000479362 BRPF1P55201 1214 aaPredicted RBP13.27□□□□□ -0.29
CDK11A-216ENST00000479362 PRPF40BQ6NWY9 871 aaKnown RBP13.27□□□□□ -0.29
CDK11A-216ENST00000479362 USP16Q9Y5T5 823 aa13.27□□□□□ -0.29
CDK11A-216ENST00000479362 BCORQ6W2J9 1755 aa13.27□□□□□ -0.29
CDK11A-216ENST00000479362 A0A0C4DFX4 3053 aa13.26□□□□□ -0.29
CDK11A-216ENST00000479362 PDE6BP35913 854 aa13.26□□□□□ -0.29
CDK11A-216ENST00000479362 ERBB4Q15303 1308 aa13.26□□□□□ -0.29
CDK11A-216ENST00000479362 KIF16BQ96L93 1317 aa13.26□□□□□ -0.29
CDK11A-216ENST00000479362 BRIP1Q9BX63 1249 aa13.26□□□□□ -0.29
CDK11A-216ENST00000479362 CHPF2Q9P2E5 772 aa13.26□□□□□ -0.29
CDK11A-216ENST00000479362 TRAF5O00463 557 aa13.25□□□□□ -0.29
CDK11A-216ENST00000479362 BCAR3O75815 825 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms