RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 AMPD1P23109 780 aa7.13□□□□□ -1.27
SPC25-204ENST00000479309 SWI5Q1ZZU3 235 aa7.13□□□□□ -1.27
SPC25-204ENST00000479309 BTLAQ7Z6A9 289 aa7.13□□□□□ -1.27
SPC25-204ENST00000479309 CHMP7Q8WUX9 453 aaPredicted RBP7.13□□□□□ -1.27
SPC25-204ENST00000479309 MYO19Q96H55 970 aa7.13□□□□□ -1.27
SPC25-204ENST00000479309 SLC30A3Q99726 388 aa7.13□□□□□ -1.27
SPC25-204ENST00000479309 RRAGCQ9HB90 399 aa7.13□□□□□ -1.27
SPC25-204ENST00000479309 KCNH4Q9UQ05 1017 aa7.13□□□□□ -1.27
SPC25-204ENST00000479309 ACIN1Q9UKV3 1341 aaKnown RBP7.12□□□□□ -1.27
SPC25-204ENST00000479309 TGFBR3LH3BV60 316 aa7.12□□□□□ -1.27
SPC25-204ENST00000479309 ITGB2P05107 769 aa7.12□□□□□ -1.27
SPC25-204ENST00000479309 RFX1P22670 979 aa7.12□□□□□ -1.27
SPC25-204ENST00000479309 COL8A1P27658 744 aa7.12□□□□□ -1.27
SPC25-204ENST00000479309 SPEM2Q0P670 501 aa7.12□□□□□ -1.27
SPC25-204ENST00000479309 GRIN2CQ14957 1233 aa7.12□□□□□ -1.27
SPC25-204ENST00000479309 PLA2G4EQ3MJ16 856 aa7.12□□□□□ -1.27
SPC25-204ENST00000479309 C11orf16Q9NQ32 467 aa7.12□□□□□ -1.27
SPC25-204ENST00000479309 ATG7O95352 703 aa7.11□□□□□ -1.27
SPC25-204ENST00000479309 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
SPC25-204ENST00000479309 NOVA2Q9UNW9 492 aaKnown RBP7.11□□□□□ -1.27
SPC25-204ENST00000479309 BCS1LQ9Y276 419 aa7.11□□□□□ -1.27
SPC25-204ENST00000479309 ALAS2P22557 587 aa7.1□□□□□ -1.27
SPC25-204ENST00000479309 FAM69CQ0P6D2 419 aa7.1□□□□□ -1.27
SPC25-204ENST00000479309 PRDM6Q9NQX0 595 aa7.1□□□□□ -1.27
SPC25-204ENST00000479309 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.1□□□□□ -1.271e-7■■■■■ 115.4
SPC25-204ENST00000479309 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
SPC25-204ENST00000479309 CDCA8Q53HL2 280 aa7.09□□□□□ -1.27
SPC25-204ENST00000479309 LCE3BQ5TA77 95 aa7.09□□□□□ -1.27
SPC25-204ENST00000479309 NGLY1Q96IV0 654 aa7.09□□□□□ -1.27
SPC25-204ENST00000479309 SUV39H2Q9H5I1 410 aa7.09□□□□□ -1.27
SPC25-204ENST00000479309 QTRT2Q9H974 415 aaKnown RBP7.09□□□□□ -1.27
SPC25-204ENST00000479309 NOP53Q9NZM5 478 aaKnown RBP7.09□□□□□ -1.27
SPC25-204ENST00000479309 GTF3C3Q9Y5Q9 886 aa7.09□□□□□ -1.27
SPC25-204ENST00000479309 KRBA1A5PL33 1030 aa7.08□□□□□ -1.28
SPC25-204ENST00000479309 LGR5O75473 907 aa7.08□□□□□ -1.28
SPC25-204ENST00000479309 COL26A1Q96A83 441 aa7.08□□□□□ -1.28
SPC25-204ENST00000479309 GSX2Q9BZM3 304 aa7.08□□□□□ -1.28
SPC25-204ENST00000479309 PROCP04070 461 aa7.07□□□□□ -1.28
SPC25-204ENST00000479309 INPP5BP32019 993 aa7.07□□□□□ -1.28
SPC25-204ENST00000479309 COL9A3Q14050 684 aaPredicted RBP7.07□□□□□ -1.28
SPC25-204ENST00000479309 OCLNQ16625 522 aa7.07□□□□□ -1.28
SPC25-204ENST00000479309 C11orf91Q3C1V1 193 aa7.07□□□□□ -1.28
SPC25-204ENST00000479309 KRTAP9-9Q9BYP9 154 aa7.07□□□□□ -1.28
SPC25-204ENST00000479309 KRTAP9-4Q9BYQ2 154 aa7.07□□□□□ -1.28
SPC25-204ENST00000479309 SERPINA10Q9UK55 444 aa7.07□□□□□ -1.28
SPC25-204ENST00000479309 STARD13Q9Y3M8 1113 aa7.07□□□□□ -1.28
SPC25-204ENST00000479309 MSTNO14793 375 aa7.06□□□□□ -1.28
SPC25-204ENST00000479309 EPB42P16452 691 aa7.06□□□□□ -1.28
SPC25-204ENST00000479309 GRNP28799 593 aaKnown RBP7.06□□□□□ -1.28
SPC25-204ENST00000479309 ADH7P40394 386 aa7.06□□□□□ -1.28
SPC25-204ENST00000479309 C20orf204Q6ZNR8 217 aa7.06□□□□□ -1.28
SPC25-204ENST00000479309 TRIM11Q96F44 468 aa7.06□□□□□ -1.28
SPC25-204ENST00000479309 SPOCK3Q9BQ16 436 aa7.06□□□□□ -1.28
SPC25-204ENST00000479309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.05□□□□□ -1.28
SPC25-204ENST00000479309 FKBP5Q13451 457 aaPredicted RBP7.05□□□□□ -1.28
SPC25-204ENST00000479309 DGKZQ13574 1117 aa7.05□□□□□ -1.28
SPC25-204ENST00000479309 CCINQ13939 588 aa7.05□□□□□ -1.28
SPC25-204ENST00000479309 MICALL1Q8N3F8 863 aa7.05□□□□□ -1.28
SPC25-204ENST00000479309 VTI1AQ96AJ9 217 aa7.05□□□□□ -1.28
SPC25-204ENST00000479309 PBXIP1Q96AQ6 731 aa7.05□□□□□ -1.28
SPC25-204ENST00000479309 KRTAP4-12Q9BQ66 201 aa7.05□□□□□ -1.28
SPC25-204ENST00000479309 KLK14Q9P0G3 267 aa7.05□□□□□ -1.28
SPC25-204ENST00000479309 MICAL2O94851 1124 aa7.04□□□□□ -1.28
SPC25-204ENST00000479309 MAP3K6O95382 1288 aa7.04□□□□□ -1.28
SPC25-204ENST00000479309 IDH3AP50213 366 aa7.04□□□□□ -1.28
SPC25-204ENST00000479309 ARSDP51689 593 aa7.04□□□□□ -1.28
SPC25-204ENST00000479309 STK32AQ8WU08 396 aa7.04□□□□□ -1.28
SPC25-204ENST00000479309 BHMTQ93088 406 aa7.04□□□□□ -1.28
SPC25-204ENST00000479309 LRFN2Q9ULH4 789 aa7.04□□□□□ -1.28
SPC25-204ENST00000479309 M0R082 166 aa7.03□□□□□ -1.28
SPC25-204ENST00000479309 EGFRP00533 1210 aa7.03□□□□□ -1.28
SPC25-204ENST00000479309 RAB44Q7Z6P3 723 aaPredicted RBP7.03□□□□□ -1.28
SPC25-204ENST00000479309 Q8N3U1 123 aa7.03□□□□□ -1.28
SPC25-204ENST00000479309 ZNF417Q8TAU3 575 aa7.03□□□□□ -1.28
SPC25-204ENST00000479309 CLP1Q92989 425 aaKnown RBP7.03□□□□□ -1.28
SPC25-204ENST00000479309 CCDC97Q96F63 343 aaPredicted RBP7.03□□□□□ -1.28
SPC25-204ENST00000479309 ZNF587Q96SQ5 575 aaPredicted RBP7.03□□□□□ -1.28
SPC25-204ENST00000479309 PLVAPQ9BX97 442 aa7.03□□□□□ -1.28
SPC25-204ENST00000479309 CXXC1Q9P0U4 656 aaPredicted RBP7.03□□□□□ -1.28
SPC25-204ENST00000479309 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.03□□□□□ -1.28
SPC25-204ENST00000479309 SPDYE3A6NKU9 549 aa7.02□□□□□ -1.29
SPC25-204ENST00000479309 OPLAHO14841 1288 aa7.02□□□□□ -1.29
SPC25-204ENST00000479309 ALBP02768 609 aa7.02□□□□□ -1.29
SPC25-204ENST00000479309 PCSK7Q16549 785 aa7.02□□□□□ -1.29
SPC25-204ENST00000479309 COX20Q5RI15 118 aa7.02□□□□□ -1.29
SPC25-204ENST00000479309 TMEM164Q5U3C3 297 aa7.02□□□□□ -1.29
SPC25-204ENST00000479309 ILDR2Q71H61 639 aa7.02□□□□□ -1.29
SPC25-204ENST00000479309 IFT43Q96FT9 208 aa7.02□□□□□ -1.29
SPC25-204ENST00000479309 PRIMPOLQ96LW4 560 aa7.02□□□□□ -1.29
SPC25-204ENST00000479309 PRMT3O60678 531 aa7.01□□□□□ -1.29
SPC25-204ENST00000479309 SPATA31C1P0DKV0 1188 aa7.01□□□□□ -1.29
SPC25-204ENST00000479309 NID1P14543 1247 aa7.01□□□□□ -1.29
SPC25-204ENST00000479309 SLC6A14Q9UN76 642 aa7.01□□□□□ -1.29
SPC25-204ENST00000479309 C1QTNF9BB2RNN3 333 aa7□□□□□ -1.29
SPC25-204ENST00000479309 PTCD1O75127 700 aaKnown RBP7□□□□□ -1.29
SPC25-204ENST00000479309 CD163Q86VB7 1156 aa7□□□□□ -1.29
SPC25-204ENST00000479309 PNMA5Q96PV4 448 aa7□□□□□ -1.29
SPC25-204ENST00000479309 DNAJB12Q9NXW2 375 aaKnown RBP7□□□□□ -1.29
SPC25-204ENST00000479309 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
SPC25-204ENST00000479309 NFKB1P19838 968 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms