RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 GJD3Q8N144 294 aa8.45□□□□□ -1.06
RFC4-212ENST00000479307 FOXD4L4Q8WXT5 416 aaPredicted RBP8.45□□□□□ -1.06
RFC4-212ENST00000479307 PIK3R5Q8WYR1 880 aa8.45□□□□□ -1.06
RFC4-212ENST00000479307 GMCL1Q96IK5 515 aa8.45□□□□□ -1.06
RFC4-212ENST00000479307 FAM129BQ96TA1 746 aa8.45□□□□□ -1.06
RFC4-212ENST00000479307 POLIQ9UNA4 740 aa8.45□□□□□ -1.06
RFC4-212ENST00000479307 SOBPA7XYQ1 873 aa8.44□□□□□ -1.06
RFC4-212ENST00000479307 TMC1Q8TDI8 760 aa8.44□□□□□ -1.06
RFC4-212ENST00000479307 ALKBH8Q96BT7 664 aaKnown RBP8.44□□□□□ -1.06
RFC4-212ENST00000479307 KLRG1Q96E93 195 aa8.44□□□□□ -1.06
RFC4-212ENST00000479307 C11orf16Q9NQ32 467 aa8.44□□□□□ -1.06
RFC4-212ENST00000479307 GMPR2Q9P2T1 348 aaKnown RBP8.44□□□□□ -1.06
RFC4-212ENST00000479307 OPLAHO14841 1288 aa8.43□□□□□ -1.06
RFC4-212ENST00000479307 TREHO43280 583 aa8.43□□□□□ -1.06
RFC4-212ENST00000479307 TYRO3Q06418 890 aa8.43□□□□□ -1.06
RFC4-212ENST00000479307 CCDC155Q8N6L0 562 aa8.43□□□□□ -1.06
RFC4-212ENST00000479307 TTC16Q8NEE8 873 aa8.43□□□□□ -1.06
RFC4-212ENST00000479307 GPR152Q8TDT2 470 aa8.43□□□□□ -1.06
RFC4-212ENST00000479307 NUDT16Q96DE0 195 aaKnown RBP8.43□□□□□ -1.06
RFC4-212ENST00000479307 RBM47A0AV96 593 aaKnown RBP8.42□□□□□ -1.06
RFC4-212ENST00000479307 FAM157BP0CG42 384 aa8.42□□□□□ -1.06
RFC4-212ENST00000479307 LCE2AQ5TA79 106 aaPredicted RBP8.42□□□□□ -1.06
RFC4-212ENST00000479307 RIPOR1Q6ZS17 1223 aa8.42□□□□□ -1.06
RFC4-212ENST00000479307 CEP63Q96MT8 703 aa8.42□□□□□ -1.06
RFC4-212ENST00000479307 NUCKS1Q9H1E3 243 aaKnown RBP8.42□□□□□ -1.06
RFC4-212ENST00000479307 FNDC3AQ9Y2H6 1198 aaKnown RBP8.42□□□□□ -1.06
RFC4-212ENST00000479307 IGHA2P01877 340 aa8.41□□□□□ -1.06
RFC4-212ENST00000479307 FGD1P98174 961 aa8.41□□□□□ -1.06
RFC4-212ENST00000479307 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
RFC4-212ENST00000479307 TRIM22Q8IYM9 498 aa8.41□□□□□ -1.06
RFC4-212ENST00000479307 BCL2L13Q9BXK5 485 aa8.41□□□□□ -1.06
RFC4-212ENST00000479307 BRD7Q9NPI1 651 aa8.41□□□□□ -1.06
RFC4-212ENST00000479307 RTCBQ9Y3I0 505 aaKnown RBP8.41□□□□□ -1.06
RFC4-212ENST00000479307 PCDHGC4Q9Y5F7 938 aa8.41□□□□□ -1.06
RFC4-212ENST00000479307 WFS1O76024 890 aa8.4□□□□□ -1.06
RFC4-212ENST00000479307 KCNQ4P56696 695 aa8.4□□□□□ -1.06
RFC4-212ENST00000479307 FMR1Q06787 632 aaKnown RBP eCLIP8.4□□□□□ -1.06
RFC4-212ENST00000479307 DSC3Q14574 896 aa8.4□□□□□ -1.06
RFC4-212ENST00000479307 ZCCHC2Q9C0B9 1178 aaKnown RBP8.4□□□□□ -1.06
RFC4-212ENST00000479307 C11orf95C9JLR9 678 aaPredicted RBP8.39□□□□□ -1.07
RFC4-212ENST00000479307 GPR182O15218 404 aa8.39□□□□□ -1.07
RFC4-212ENST00000479307 ATXN7O15265 892 aaPredicted RBP8.39□□□□□ -1.07
RFC4-212ENST00000479307 NEFLP07196 543 aa8.39□□□□□ -1.07
RFC4-212ENST00000479307 ITGA6P23229 1130 aa8.39□□□□□ -1.07
RFC4-212ENST00000479307 LAMC2Q13753 1193 aa8.39□□□□□ -1.07
RFC4-212ENST00000479307 PDE12Q6L8Q7 609 aaKnown RBP8.39□□□□□ -1.07
RFC4-212ENST00000479307 EFSO43281 561 aa8.38□□□□□ -1.07
RFC4-212ENST00000479307 EGFRP00533 1210 aa8.38□□□□□ -1.07
RFC4-212ENST00000479307 PLCB3Q01970 1234 aa8.38□□□□□ -1.07
RFC4-212ENST00000479307 UBAP2LQ14157 1087 aaKnown RBP8.38□□□□□ -1.07
RFC4-212ENST00000479307 EAPPQ56P03 285 aaPredicted RBP8.38□□□□□ -1.07
RFC4-212ENST00000479307 ZNF326Q5BKZ1 582 aaKnown RBP8.38□□□□□ -1.07
RFC4-212ENST00000479307 XKR5Q6UX68 686 aa8.38□□□□□ -1.07
RFC4-212ENST00000479307 FBXO33Q7Z6M2 555 aa8.38□□□□□ -1.07
RFC4-212ENST00000479307 CMTR1Q8N1G2 835 aaKnown RBP8.38□□□□□ -1.07
RFC4-212ENST00000479307 KCNMB2Q9Y691 235 aa8.38□□□□□ -1.07
RFC4-212ENST00000479307 ERCC6Q03468 1493 aa8.38□□□□□ -1.07
RFC4-212ENST00000479307 THBS1P07996 1170 aa8.37□□□□□ -1.07
RFC4-212ENST00000479307 SNRPBP14678 240 aaKnown RBP8.37□□□□□ -1.07
RFC4-212ENST00000479307 DBN1Q16643 649 aa8.37□□□□□ -1.07
RFC4-212ENST00000479307 C8orf34Q49A92 452 aa8.37□□□□□ -1.07
RFC4-212ENST00000479307 ZNF837Q96EG3 531 aaPredicted RBP8.37□□□□□ -1.07
RFC4-212ENST00000479307 BCL11AQ9H165 835 aa8.37□□□□□ -1.07
RFC4-212ENST00000479307 KCNH4Q9UQ05 1017 aa8.37□□□□□ -1.07
RFC4-212ENST00000479307 UBAP1LF5GYI3 381 aa8.36□□□□□ -1.07
RFC4-212ENST00000479307 KHNYNO15037 678 aaKnown RBP8.36□□□□□ -1.07
RFC4-212ENST00000479307 P4HBP07237 508 aaKnown RBP8.36□□□□□ -1.07
RFC4-212ENST00000479307 GIPC2Q8TF65 315 aa8.36□□□□□ -1.07
RFC4-212ENST00000479307 GGNBP2Q9H3C7 697 aa8.36□□□□□ -1.07
RFC4-212ENST00000479307 EFCC1Q9HA90 598 aa8.36□□□□□ -1.07
RFC4-212ENST00000479307 NDFIP2Q9NV92 336 aa8.36□□□□□ -1.07
RFC4-212ENST00000479307 ATXN7L1Q9ULK2 861 aaPredicted RBP8.36□□□□□ -1.07
RFC4-212ENST00000479307 PHF24Q9UPV7 400 aa8.36□□□□□ -1.07
RFC4-212ENST00000479307 XYLBO75191 536 aa8.35□□□□□ -1.07
RFC4-212ENST00000479307 ZNF16P17020 682 aaPredicted RBP8.35□□□□□ -1.07
RFC4-212ENST00000479307 GRNP28799 593 aaKnown RBP8.35□□□□□ -1.07
RFC4-212ENST00000479307 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
RFC4-212ENST00000479307 TNP2Q05952 138 aa8.35□□□□□ -1.07
RFC4-212ENST00000479307 TRIP4Q15650 581 aaPredicted RBP8.35□□□□□ -1.07
RFC4-212ENST00000479307 ZNF438Q7Z4V0 828 aa8.35□□□□□ -1.07
RFC4-212ENST00000479307 NIF3L1Q9GZT8 377 aa8.35□□□□□ -1.07
RFC4-212ENST00000479307 DNAJC25Q9H1X3 360 aa8.35□□□□□ -1.07
RFC4-212ENST00000479307 DCDC2BA2VCK2 349 aa8.34□□□□□ -1.07
RFC4-212ENST00000479307 MAPTP10636 758 aaKnown RBP8.34□□□□□ -1.07
RFC4-212ENST00000479307 ATP2B2Q01814 1243 aa8.34□□□□□ -1.07
RFC4-212ENST00000479307 FOXR1Q6PIV2 292 aa8.34□□□□□ -1.07
RFC4-212ENST00000479307 SNX29Q8TEQ0 813 aa8.34□□□□□ -1.07
RFC4-212ENST00000479307 CFHR5Q9BXR6 569 aa8.34□□□□□ -1.07
RFC4-212ENST00000479307 CUEDC1Q9NWM3 386 aaPredicted RBP8.34□□□□□ -1.07
RFC4-212ENST00000479307 USP20Q9Y2K6 914 aa8.34□□□□□ -1.07
RFC4-212ENST00000479307 BNIP3LO60238 219 aa8.33□□□□□ -1.08
RFC4-212ENST00000479307 PPFIA3O75145 1194 aa8.33□□□□□ -1.08
RFC4-212ENST00000479307 MAPK8P45983 427 aa8.33□□□□□ -1.08
RFC4-212ENST00000479307 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
RFC4-212ENST00000479307 NLRP13Q86W25 1043 aa8.33□□□□□ -1.08
RFC4-212ENST00000479307 NANOS1Q8WY41 292 aaKnown RBP8.33□□□□□ -1.08
RFC4-212ENST00000479307 TRERF1Q96PN7 1200 aa8.33□□□□□ -1.08
RFC4-212ENST00000479307 ELP3Q9H9T3 547 aa8.33□□□□□ -1.08
RFC4-212ENST00000479307 MARK1Q9P0L2 795 aa8.33□□□□□ -1.08
RFC4-212ENST00000479307 SCRIBQ14160 1630 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms