RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	BRIP1	Q9BX63	1249 aa		22.92	■■□□□ 1.26
RFK-204	ENST00000479197	GOLGB1	Q14789	3259 aa	Known RBP	22.91	■■□□□ 1.26
RFK-204	ENST00000479197	RNF123	Q5XPI4	1314 aa		22.91	■■□□□ 1.26
RFK-204	ENST00000479197		F6X3S4	739 aa		22.91	■■□□□ 1.26
RFK-204	ENST00000479197	ABCC12	Q96J65	1359 aa		22.9	■■□□□ 1.26
RFK-204	ENST00000479197	ERFE	Q4G0M1	354 aa		22.9	■■□□□ 1.26
RFK-204	ENST00000479197	CCDC191	Q8NCU4	936 aa		22.9	■■□□□ 1.26
RFK-204	ENST00000479197	IGKV5-2	P06315	115 aa		22.89	■■□□□ 1.26
RFK-204	ENST00000479197	CWC25	Q9NXE8	425 aa	Predicted RBP	22.89	■■□□□ 1.26
RFK-204	ENST00000479197	TRMT112	Q9UI30	125 aa	Known RBP	22.89	■■□□□ 1.26
RFK-204	ENST00000479197	KIF16B	Q96L93	1317 aa		22.89	■■□□□ 1.25
RFK-204	ENST00000479197	DLEC1	Q9Y238	1755 aa		22.89	■■□□□ 1.25
RFK-204	ENST00000479197	TNRC6C	Q9HCJ0	1690 aa	Known RBP	22.89	■■□□□ 1.25
RFK-204	ENST00000479197	COL11A2	P13942	1736 aa	Predicted RBP	22.88	■■□□□ 1.25
RFK-204	ENST00000479197	PDE6B	P35913	854 aa		22.88	■■□□□ 1.25
RFK-204	ENST00000479197	BRCA1	P38398	1863 aa	Known RBP	22.88	■■□□□ 1.25
RFK-204	ENST00000479197	NOB1	Q9ULX3	412 aa	Known RBP	22.88	■■□□□ 1.25
RFK-204	ENST00000479197	RIC1	Q4ADV7	1423 aa		22.88	■■□□□ 1.25
RFK-204	ENST00000479197	NEURL1B	A8MQ27	555 aa		22.87	■■□□□ 1.25
RFK-204	ENST00000479197	BCAR3	O75815	825 aa		22.87	■■□□□ 1.25
RFK-204	ENST00000479197	CWF19L2	Q2TBE0	894 aa	Known RBP	22.87	■■□□□ 1.25
RFK-204	ENST00000479197	SH3TC1	Q8TE82	1336 aa		22.87	■■□□□ 1.25
RFK-204	ENST00000479197		A0A0G2JLW4	131 aa		22.87	■■□□□ 1.25
RFK-204	ENST00000479197	DPEP1	P16444	411 aa		22.87	■■□□□ 1.25
RFK-204	ENST00000479197	LINS1	Q8NG48	757 aa		22.87	■■□□□ 1.25
RFK-204	ENST00000479197	CHRNA5	P30532	468 aa		22.86	■■□□□ 1.25
RFK-204	ENST00000479197	SLC4A10	Q6U841	1118 aa		22.86	■■□□□ 1.25
RFK-204	ENST00000479197	PDZRN3	Q9UPQ7	1066 aa		22.86	■■□□□ 1.25
RFK-204	ENST00000479197	LAMB2	P55268	1798 aa		22.86	■■□□□ 1.25
RFK-204	ENST00000479197	DDX60	Q8IY21	1712 aa	Known RBP	22.85	■■□□□ 1.25
RFK-204	ENST00000479197	BEND3	Q5T5X7	828 aa		22.85	■■□□□ 1.25
RFK-204	ENST00000479197	C2CD5	Q86YS7	1000 aa		22.85	■■□□□ 1.25
RFK-204	ENST00000479197	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	22.85	■■□□□ 1.25
RFK-204	ENST00000479197	FAM89A	Q96GI7	184 aa		22.85	■■□□□ 1.25
RFK-204	ENST00000479197		H0YIN7	160 aa		22.84	■■□□□ 1.25
RFK-204	ENST00000479197	SLC10A5	Q5PT55	438 aa		22.84	■■□□□ 1.25
RFK-204	ENST00000479197	SYNE4	Q8N205	404 aa		22.84	■■□□□ 1.25
RFK-204	ENST00000479197	KCNA3	P22001	575 aa		22.83	■■□□□ 1.25
RFK-204	ENST00000479197	ARHGAP45	Q92619	1136 aa		22.83	■■□□□ 1.25
RFK-204	ENST00000479197	API5	Q9BZZ5	524 aa	Known RBP	22.83	■■□□□ 1.25
RFK-204	ENST00000479197	KLRG2	A4D1S0	409 aa	Predicted RBP	22.82	■■□□□ 1.24
RFK-204	ENST00000479197	PCCA	P05165	728 aa	Predicted RBP	22.82	■■□□□ 1.24
RFK-204	ENST00000479197	GCKR	Q14397	625 aa		22.82	■■□□□ 1.24
RFK-204	ENST00000479197	RTL5	Q5HYW3	569 aa	Predicted RBP	22.82	■■□□□ 1.24
RFK-204	ENST00000479197	IPO8	O15397	1037 aa	Known RBP	22.82	■■□□□ 1.24
RFK-204	ENST00000479197	FRAT1	Q92837	279 aa	Predicted RBP	22.82	■■□□□ 1.24
RFK-204	ENST00000479197	SRCIN1	Q9C0H9	1055 aa		22.82	■■□□□ 1.24
RFK-204	ENST00000479197	SRGN	P10124	158 aa		22.81	■■□□□ 1.24
RFK-204	ENST00000479197	HCLS1	P14317	486 aa	Predicted RBP	22.81	■■□□□ 1.24
RFK-204	ENST00000479197	NLRP3	Q96P20	1036 aa		22.81	■■□□□ 1.24
RFK-204	ENST00000479197	PIM2	Q9P1W9	311 aa		22.81	■■□□□ 1.24
RFK-204	ENST00000479197	IRS4	O14654	1257 aa	Predicted RBP	22.8	■■□□□ 1.24
RFK-204	ENST00000479197	ALDH1L1	O75891	902 aa		22.8	■■□□□ 1.24
RFK-204	ENST00000479197	CRY2	Q49AN0	593 aa		22.8	■■□□□ 1.24
RFK-204	ENST00000479197	RCAN3	Q9UKA8	241 aa		22.8	■■□□□ 1.24
RFK-204	ENST00000479197	WWC3	Q9ULE0	1092 aa		22.8	■■□□□ 1.24
RFK-204	ENST00000479197	UTRN	P46939	3433 aa		22.79	■■□□□ 1.24
RFK-204	ENST00000479197	CACNA1S	Q13698	1873 aa		22.79	■■□□□ 1.24
RFK-204	ENST00000479197	HSP90B1	P14625	803 aa	Known RBP	22.79	■■□□□ 1.24
RFK-204	ENST00000479197	ATF7IP	Q6VMQ6	1270 aa		22.79	■■□□□ 1.24
RFK-204	ENST00000479197	C3orf67	Q6ZVT6	689 aa		22.79	■■□□□ 1.24
RFK-204	ENST00000479197	MASTL	Q96GX5	879 aa		22.79	■■□□□ 1.24
RFK-204	ENST00000479197	CDHR2	Q9BYE9	1310 aa		22.78	■■□□□ 1.24
RFK-204	ENST00000479197		H7C1W4	665 aa		22.78	■■□□□ 1.24
RFK-204	ENST00000479197	JARID2	Q92833	1246 aa	Predicted RBP	22.78	■■□□□ 1.24
RFK-204	ENST00000479197	ZNF622	Q969S3	477 aa	Known RBP eCLIP	22.78	■■□□□ 1.24
RFK-204	ENST00000479197	MYH3	P11055	1940 aa		22.78	■■□□□ 1.24
RFK-204	ENST00000479197	TRIM27	P14373	513 aa		22.77	■■□□□ 1.24
RFK-204	ENST00000479197	NPR1	P16066	1061 aa		22.77	■■□□□ 1.24
RFK-204	ENST00000479197	ZKSCAN2	Q63HK3	967 aa		22.77	■■□□□ 1.24
RFK-204	ENST00000479197	STYK1	Q6J9G0	422 aa		22.77	■■□□□ 1.24
RFK-204	ENST00000479197	UBE3B	Q7Z3V4	1068 aa		22.77	■■□□□ 1.24
RFK-204	ENST00000479197	PELP1	Q8IZL8	1130 aa	Known RBP	22.77	■■□□□ 1.24
RFK-204	ENST00000479197	ARFGEF1	Q9Y6D6	1849 aa		22.77	■■□□□ 1.24
RFK-204	ENST00000479197	ABCC4	O15439	1325 aa		22.77	■■□□□ 1.24
RFK-204	ENST00000479197	RPGR	Q92834	1020 aa	Known RBP	22.77	■■□□□ 1.24
RFK-204	ENST00000479197	CCT4	P50991	539 aa	Known RBP	22.76	■■□□□ 1.23
RFK-204	ENST00000479197	GPR162	Q16538	588 aa		22.76	■■□□□ 1.23
RFK-204	ENST00000479197	DALRD3	Q5D0E6	543 aa	Known RBP	22.76	■■□□□ 1.23
RFK-204	ENST00000479197	TTLL6	Q8N841	843 aa		22.76	■■□□□ 1.23
RFK-204	ENST00000479197	BCS1L	Q9Y276	419 aa		22.76	■■□□□ 1.23
RFK-204	ENST00000479197	DCAF8L1	A6NGE4	600 aa		22.75	■■□□□ 1.23
RFK-204	ENST00000479197	GRM8	O00222	908 aa		22.75	■■□□□ 1.23
RFK-204	ENST00000479197	YBX3	P16989	372 aa	Known RBP eCLIP	22.75	■■□□□ 1.23	8e-7	■□□□□ 11.2
RFK-204	ENST00000479197	CASP7	P55210	303 aa		22.75	■■□□□ 1.23
RFK-204	ENST00000479197	CNKSR1	Q969H4	720 aa		22.75	■■□□□ 1.23
RFK-204	ENST00000479197	C9orf78	Q9NZ63	289 aa	Predicted RBP	22.75	■■□□□ 1.23
RFK-204	ENST00000479197	PDE8A	O60658	829 aa		22.74	■■□□□ 1.23
RFK-204	ENST00000479197	HOXA10	P31260	410 aa	Predicted RBP	22.74	■■□□□ 1.23
RFK-204	ENST00000479197	SLX4	Q8IY92	1834 aa		22.73	■■□□□ 1.23
RFK-204	ENST00000479197	SF3B3	Q15393	1217 aa	Known RBP	22.73	■■□□□ 1.23
RFK-204	ENST00000479197	TNN	Q9UQP3	1299 aa		22.73	■■□□□ 1.23
RFK-204	ENST00000479197	CLUAP1	Q96AJ1	413 aa		22.72	■■□□□ 1.23
RFK-204	ENST00000479197	RBM17	Q96I25	401 aa	Known RBP	22.72	■■□□□ 1.23
RFK-204	ENST00000479197	ALDH1B1	P30837	517 aa		22.72	■■□□□ 1.23
RFK-204	ENST00000479197	INTS3	Q68E01	1043 aa	Known RBP	22.72	■■□□□ 1.23
RFK-204	ENST00000479197	PLA2G12B	Q9BX93	195 aa		22.72	■■□□□ 1.23
RFK-204	ENST00000479197	PRPF40B	Q6NWY9	871 aa	Known RBP	22.71	■■□□□ 1.23
RFK-204	ENST00000479197	CRAMP1	Q96RY5	1269 aa		22.71	■■□□□ 1.23
RFK-204	ENST00000479197	UTY	O14607	1347 aa		22.7	■■□□□ 1.22

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms