RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 GJA5P36382 358 aa8.9□□□□□ -0.98
USP48-208ENST00000479177 MMP16P51512 607 aa8.9□□□□□ -0.98
USP48-208ENST00000479177 SH3D19Q5HYK7 790 aa8.9□□□□□ -0.98
USP48-208ENST00000479177 NUTM2GQ5VZR2 741 aa8.9□□□□□ -0.98
USP48-208ENST00000479177 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
USP48-208ENST00000479177 HPS1Q92902 700 aa8.9□□□□□ -0.98
USP48-208ENST00000479177 MRGPRX2Q96LB1 330 aa8.9□□□□□ -0.98
USP48-208ENST00000479177 POLKQ9UBT6 870 aa8.9□□□□□ -0.98
USP48-208ENST00000479177 EMILIN1Q9Y6C2 1016 aa8.9□□□□□ -0.98
USP48-208ENST00000479177 RTL1A6NKG5 1358 aa8.89□□□□□ -0.99
USP48-208ENST00000479177 PHLPP1O60346 1717 aa8.89□□□□□ -0.99
USP48-208ENST00000479177 ZBTB24O43167 697 aaPredicted RBP8.89□□□□□ -0.99
USP48-208ENST00000479177 FBLN1P23142 703 aa8.89□□□□□ -0.99
USP48-208ENST00000479177 RRS1Q15050 365 aaKnown RBP8.89□□□□□ -0.99
USP48-208ENST00000479177 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
USP48-208ENST00000479177 CFAP53Q96M91 514 aa8.89□□□□□ -0.99
USP48-208ENST00000479177 RSPH6AQ9H0K4 717 aa8.89□□□□□ -0.99
USP48-208ENST00000479177 COL22A1Q8NFW1 1626 aaPredicted RBP8.89□□□□□ -0.99
USP48-208ENST00000479177 KIF24Q5T7B8 1368 aa8.88□□□□□ -0.99
USP48-208ENST00000479177 MAP3K19Q56UN5 1328 aa8.88□□□□□ -0.99
USP48-208ENST00000479177 JUNDP17535 347 aa8.88□□□□□ -0.99
USP48-208ENST00000479177 SKIV2LQ15477 1246 aaKnown RBP8.88□□□□□ -0.99
USP48-208ENST00000479177 FAM9BQ8IZU0 186 aa8.88□□□□□ -0.99
USP48-208ENST00000479177 ZBTB3Q9H5J0 574 aa8.88□□□□□ -0.99
USP48-208ENST00000479177 ABCC6O95255 1503 aa8.88□□□□□ -0.99
USP48-208ENST00000479177 RGPD1P0DJD0 1748 aa8.88□□□□□ -0.99
USP48-208ENST00000479177 FLT4P35916 1363 aa8.87□□□□□ -0.99
USP48-208ENST00000479177 TOM1O60784 492 aa8.87□□□□□ -0.99
USP48-208ENST00000479177 LILRB3O75022 631 aa8.87□□□□□ -0.99
USP48-208ENST00000479177 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
USP48-208ENST00000479177 TRIM32Q13049 653 aa8.87□□□□□ -0.99
USP48-208ENST00000479177 YTHDC1Q96MU7 727 aaKnown RBP8.87□□□□□ -0.99
USP48-208ENST00000479177 NUTM2BA6NNL0 878 aaPredicted RBP8.86□□□□□ -0.99
USP48-208ENST00000479177 NUTM2EB1AL46 878 aaPredicted RBP8.86□□□□□ -0.99
USP48-208ENST00000479177 UBAP1LF5GYI3 381 aa8.86□□□□□ -0.99
USP48-208ENST00000479177 WDR43Q15061 677 aaKnown RBP eCLIP8.86□□□□□ -0.99
USP48-208ENST00000479177 NUTM2AQ8IVF1 878 aaPredicted RBP8.86□□□□□ -0.99
USP48-208ENST00000479177 KCNH5Q8NCM2 988 aa8.86□□□□□ -0.99
USP48-208ENST00000479177 COL18A1P39060 1754 aa8.86□□□□□ -0.99
USP48-208ENST00000479177 PPM1GO15355 546 aaPredicted RBP8.85□□□□□ -0.99
USP48-208ENST00000479177 GCP02774 474 aa8.85□□□□□ -0.99
USP48-208ENST00000479177 TUSC1Q2TAM9 212 aa8.85□□□□□ -0.99
USP48-208ENST00000479177 PRPF38BQ5VTL8 546 aaKnown RBP8.85□□□□□ -0.99
USP48-208ENST00000479177 CCDC24Q8N4L8 307 aa8.85□□□□□ -0.99
USP48-208ENST00000479177 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.85□□□□□ -0.99
USP48-208ENST00000479177 SENP2Q9HC62 589 aa8.85□□□□□ -0.99
USP48-208ENST00000479177 ADAMTS8Q9UP79 889 aa8.85□□□□□ -0.99
USP48-208ENST00000479177 CPDO75976 1380 aa8.85□□□□□ -0.99
USP48-208ENST00000479177 CAMTA1Q9Y6Y1 1673 aa8.85□□□□□ -0.99
USP48-208ENST00000479177 LOC100996750A0A140TA64 210 aa8.84□□□□□ -0.99
USP48-208ENST00000479177 DIAPH1O60610 1272 aaKnown RBP8.84□□□□□ -0.99
USP48-208ENST00000479177 HOXC9P31274 260 aa8.84□□□□□ -0.99
USP48-208ENST00000479177 IL13P35225 146 aa8.84□□□□□ -0.99
USP48-208ENST00000479177 TSC1Q92574 1164 aa8.84□□□□□ -0.99
USP48-208ENST00000479177 KRTAP4-6Q9BYQ5 205 aa8.84□□□□□ -0.99
USP48-208ENST00000479177 LMO7Q8WWI1 1683 aa8.84□□□□□ -0.99
USP48-208ENST00000479177 SPDYE5A6NIY4 337 aa8.83□□□□□ -1
USP48-208ENST00000479177 AMPHP49418 695 aa8.83□□□□□ -1
USP48-208ENST00000479177 PIP4K2BP78356 416 aa8.83□□□□□ -1
USP48-208ENST00000479177 EIF4A2Q14240 407 aaKnown RBP8.83□□□□□ -1
USP48-208ENST00000479177 HSP90AB2PQ58FF8 381 aa8.83□□□□□ -1
USP48-208ENST00000479177 PTCRAQ6ISU1 281 aaPredicted RBP8.83□□□□□ -1
USP48-208ENST00000479177 ARHGEF25Q86VW2 580 aa8.83□□□□□ -1
USP48-208ENST00000479177 NUDCQ9Y266 331 aa8.83□□□□□ -1
USP48-208ENST00000479177 RGPD5Q99666 1765 aa8.83□□□□□ -1
USP48-208ENST00000479177 FAM208AQ9UK61 1670 aaKnown RBP8.82□□□□□ -1
USP48-208ENST00000479177 GMPRP36959 345 aa8.82□□□□□ -1
USP48-208ENST00000479177 SKOR1P84550 965 aa8.82□□□□□ -1
USP48-208ENST00000479177 HNRNPUQ00839 825 aaKnown RBP eCLIP8.82□□□□□ -1
USP48-208ENST00000479177 IP6K1Q92551 441 aa8.82□□□□□ -1
USP48-208ENST00000479177 LRRC59Q96AG4 307 aaKnown RBP8.82□□□□□ -1
USP48-208ENST00000479177 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
USP48-208ENST00000479177 ZBED9Q6R2W3 1325 aa8.81□□□□□ -1
USP48-208ENST00000479177 NCAPD2Q15021 1401 aa8.81□□□□□ -1
USP48-208ENST00000479177 U2SURPO15042 1029 aaKnown RBP8.81□□□□□ -1
USP48-208ENST00000479177 U2AF1L5P0DN76 240 aaPredicted RBP8.81□□□□□ -1
USP48-208ENST00000479177 U2AF1Q01081 240 aaKnown RBP eCLIP8.81□□□□□ -1
USP48-208ENST00000479177 KIAA0232Q92628 1395 aa8.81□□□□□ -1
USP48-208ENST00000479177 RGPD2P0DJD1 1756 aa8.81□□□□□ -1
USP48-208ENST00000479177 IGSF1Q8N6C5 1336 aa8.8□□□□□ -1
USP48-208ENST00000479177 ZC3H6P61129 1189 aaKnown RBP8.8□□□□□ -1
USP48-208ENST00000479177 CCDC146Q8IYE0 955 aa8.8□□□□□ -1
USP48-208ENST00000479177 KDRP35968 1356 aa8.8□□□□□ -1
USP48-208ENST00000479177 COL14A1Q05707 1796 aaKnown RBP8.8□□□□□ -1
USP48-208ENST00000479177 ZBTB7CA1YPR0 619 aa8.79□□□□□ -1
USP48-208ENST00000479177 CCNYL3P0C7X3 344 aa8.79□□□□□ -1
USP48-208ENST00000479177 CTDSPL2Q05D32 466 aa8.79□□□□□ -1
USP48-208ENST00000479177 PTPRNQ16849 979 aa8.79□□□□□ -1
USP48-208ENST00000479177 RC3H1Q5TC82 1133 aaKnown RBP8.79□□□□□ -1
USP48-208ENST00000479177 DESI1Q6ICB0 168 aa8.79□□□□□ -1
USP48-208ENST00000479177 LYPD8Q6UX82 237 aa8.79□□□□□ -1
USP48-208ENST00000479177 FBXO41Q8TF61 875 aa8.79□□□□□ -1
USP48-208ENST00000479177 KIFC2Q96AC6 838 aa8.79□□□□□ -1
USP48-208ENST00000479177 RUNDC1Q96C34 613 aa8.79□□□□□ -1
USP48-208ENST00000479177 GOPCQ9HD26 462 aa8.79□□□□□ -1
USP48-208ENST00000479177 PLCH1Q4KWH8 1693 aa8.78□□□□□ -1
USP48-208ENST00000479177 JCADQ9P266 1359 aa8.78□□□□□ -1
USP48-208ENST00000479177 VEGFBP49765 207 aa8.78□□□□□ -1
USP48-208ENST00000479177 AEBP1Q8IUX7 1158 aa8.78□□□□□ -1
USP48-208ENST00000479177 PCMTD1Q96MG8 357 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms