RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 ALDH1B1P30837 517 aa28.73■■■□□ 2.19
MCF2L2-210ENST00000478652 C3orf67Q6ZVT6 689 aa28.73■■■□□ 2.19
MCF2L2-210ENST00000478652 CHL1O00533 1208 aa28.72■■■□□ 2.19
MCF2L2-210ENST00000478652 COL4A5P29400 1685 aa28.72■■■□□ 2.19
MCF2L2-210ENST00000478652 LAS1LQ9Y4W2 734 aaKnown RBP28.71■■■□□ 2.19
MCF2L2-210ENST00000478652 ZNF541Q9H0D2 1346 aa28.7■■■□□ 2.19
MCF2L2-210ENST00000478652 POTEIP0CG38 1075 aa28.69■■■□□ 2.18
MCF2L2-210ENST00000478652 POTEJP0CG39 1038 aa28.69■■■□□ 2.18
MCF2L2-210ENST00000478652 RPGRQ92834 1020 aaKnown RBP28.69■■■□□ 2.18
MCF2L2-210ENST00000478652 DDX60Q8IY21 1712 aaKnown RBP28.69■■■□□ 2.18
MCF2L2-210ENST00000478652 HOXA10P31260 410 aaPredicted RBP28.68■■■□□ 2.18
MCF2L2-210ENST00000478652 AIMP1Q12904 312 aaKnown RBP28.68■■■□□ 2.18
MCF2L2-210ENST00000478652 COPS6Q7L5N1 327 aa28.68■■■□□ 2.18
MCF2L2-210ENST00000478652 RTKN2Q8IZC4 609 aa28.68■■■□□ 2.18
MCF2L2-210ENST00000478652 XAGE3Q8WTP9 111 aa28.68■■■□□ 2.18
MCF2L2-210ENST00000478652 KLRG1Q96E93 195 aa28.68■■■□□ 2.18
MCF2L2-210ENST00000478652 PARP10Q53GL7 1025 aa28.67■■■□□ 2.18
MCF2L2-210ENST00000478652 PPP1R42Q7Z4L9 355 aa28.67■■■□□ 2.18
MCF2L2-210ENST00000478652 SYNE4Q8N205 404 aa28.67■■■□□ 2.18
MCF2L2-210ENST00000478652 IARSP41252 1262 aaKnown RBP28.66■■■□□ 2.18
MCF2L2-210ENST00000478652 DDX21Q9NR30 783 aaKnown RBP eCLIP28.65■■■□□ 2.18
MCF2L2-210ENST00000478652 CHPF2Q9P2E5 772 aa28.65■■■□□ 2.18
MCF2L2-210ENST00000478652 ADAMTSL1Q8N6G6 1762 aa28.65■■■□□ 2.18
MCF2L2-210ENST00000478652 UTP14AQ9BVJ6 771 aaKnown RBP28.64■■■□□ 2.18
MCF2L2-210ENST00000478652 L3MBTL3Q96JM7 780 aaPredicted RBP28.63■■■□□ 2.17
MCF2L2-210ENST00000478652 CRAMP1Q96RY5 1269 aa28.63■■■□□ 2.17
MCF2L2-210ENST00000478652 PSMD1Q99460 953 aa28.63■■■□□ 2.17
MCF2L2-210ENST00000478652 TCERG1O14776 1098 aaKnown RBP28.62■■■□□ 2.17
MCF2L2-210ENST00000478652 NLRP10Q86W26 655 aa28.62■■■□□ 2.17
MCF2L2-210ENST00000478652 RBM17Q96I25 401 aaKnown RBP28.62■■■□□ 2.17
MCF2L2-210ENST00000478652 LTBP1Q14766 1721 aa28.61■■■□□ 2.17
MCF2L2-210ENST00000478652 PPEF1O14829 653 aaPredicted RBP28.61■■■□□ 2.17
MCF2L2-210ENST00000478652 SLC10A5Q5PT55 438 aa28.61■■■□□ 2.17
MCF2L2-210ENST00000478652 FZD9O00144 591 aa28.6■■■□□ 2.17
MCF2L2-210ENST00000478652 HDGFL1Q5TGJ6 251 aa28.6■■■□□ 2.17
MCF2L2-210ENST00000478652 ZNF428Q96B54 188 aa28.6■■■□□ 2.17
MCF2L2-210ENST00000478652 CFAP44Q96MT7 982 aa28.6■■■□□ 2.17
MCF2L2-210ENST00000478652 NLRP3Q96P20 1036 aa28.6■■■□□ 2.17
MCF2L2-210ENST00000478652 MBIPQ9NS73 344 aa28.6■■■□□ 2.17
MCF2L2-210ENST00000478652 APAF1O14727 1248 aa28.59■■■□□ 2.17
MCF2L2-210ENST00000478652 TCIRG1Q13488 830 aa28.59■■■□□ 2.17
MCF2L2-210ENST00000478652 HSP90AB3PQ58FF7 597 aa28.59■■■□□ 2.17
MCF2L2-210ENST00000478652 CC2D2BQ6DHV5 1058 aa28.59■■■□□ 2.17
MCF2L2-210ENST00000478652 CHADLQ6NUI6 762 aa28.59■■■□□ 2.17
MCF2L2-210ENST00000478652 JMYQ8N9B5 988 aa28.59■■■□□ 2.17
MCF2L2-210ENST00000478652 TAF1DQ9H5J8 278 aaPredicted RBP28.59■■■□□ 2.17
MCF2L2-210ENST00000478652 ABCC4O15439 1325 aa28.58■■■□□ 2.17
MCF2L2-210ENST00000478652 IQCA1LA6NCM1 817 aa28.57■■■□□ 2.16
MCF2L2-210ENST00000478652 HCLS1P14317 486 aaPredicted RBP28.57■■■□□ 2.16
MCF2L2-210ENST00000478652 RNF123Q5XPI4 1314 aa28.57■■■□□ 2.16
MCF2L2-210ENST00000478652 LRRC37AA6NMS7 1700 aa28.57■■■□□ 2.16
MCF2L2-210ENST00000478652 HOXB7P09629 217 aa28.56■■■□□ 2.16
MCF2L2-210ENST00000478652 ZNF853P0CG23 659 aa28.56■■■□□ 2.16
MCF2L2-210ENST00000478652 DUSP27Q5VZP5 1158 aa28.56■■■□□ 2.16
MCF2L2-210ENST00000478652 COL4A1P02462 1669 aa28.55■■■□□ 2.16
MCF2L2-210ENST00000478652 IFFO2Q5TF58 517 aa28.55■■■□□ 2.16
MCF2L2-210ENST00000478652 CCDC184Q52MB2 194 aa28.54■■■□□ 2.16
MCF2L2-210ENST00000478652 JDP2Q8WYK2 163 aa28.54■■■□□ 2.16
MCF2L2-210ENST00000478652 TRMT112Q9UI30 125 aaKnown RBP28.54■■■□□ 2.16
MCF2L2-210ENST00000478652 LDHDQ86WU2 507 aa28.53■■■□□ 2.16
MCF2L2-210ENST00000478652 PLBD2Q8NHP8 589 aa28.53■■■□□ 2.16
MCF2L2-210ENST00000478652 DBF4Q9UBU7 674 aaPredicted RBP28.53■■■□□ 2.16
MCF2L2-210ENST00000478652 HACL1Q9UJ83 578 aa28.53■■■□□ 2.16
MCF2L2-210ENST00000478652 SH3TC1Q8TE82 1336 aa28.52■■■□□ 2.16
MCF2L2-210ENST00000478652 EAPPQ56P03 285 aaPredicted RBP28.52■■■□□ 2.16
MCF2L2-210ENST00000478652 LARGE2Q8N3Y3 721 aa28.52■■■□□ 2.16
MCF2L2-210ENST00000478652 ATP6V0A2Q9Y487 856 aa28.52■■■□□ 2.16
MCF2L2-210ENST00000478652 DUOX1Q9NRD9 1551 aa28.51■■■□□ 2.15
MCF2L2-210ENST00000478652 EPHX2P34913 555 aa28.51■■■□□ 2.15
MCF2L2-210ENST00000478652 ANKRD13DQ6ZTN6 518 aa28.51■■■□□ 2.15
MCF2L2-210ENST00000478652 GPC2Q8N158 579 aa28.51■■■□□ 2.15
MCF2L2-210ENST00000478652 GRIPAP1Q4V328 841 aa28.5■■■□□ 2.15
MCF2L2-210ENST00000478652 ISCA1Q9BUE6 129 aa28.5■■■□□ 2.15
MCF2L2-210ENST00000478652 IFT57Q9NWB7 429 aa28.5■■■□□ 2.15
MCF2L2-210ENST00000478652 PASKQ96RG2 1323 aa28.49■■■□□ 2.15
MCF2L2-210ENST00000478652 ATP5J2-PTCD1G3V325 749 aa28.49■■■□□ 2.15
MCF2L2-210ENST00000478652 GJA3Q9Y6H8 435 aa28.49■■■□□ 2.15
MCF2L2-210ENST00000478652 EIF6P56537 245 aaKnown RBP28.48■■■□□ 2.15
MCF2L2-210ENST00000478652 AOC3Q16853 763 aa28.48■■■□□ 2.15
MCF2L2-210ENST00000478652 HYPKQ9NX55 129 aa28.48■■■□□ 2.15
MCF2L2-210ENST00000478652 PCNTO95613 3336 aa28.48■■■□□ 2.15
MCF2L2-210ENST00000478652 ELL2O00472 640 aaPredicted RBP28.47■■■□□ 2.15
MCF2L2-210ENST00000478652 PPIP5K2O43314 1243 aa28.47■■■□□ 2.15
MCF2L2-210ENST00000478652 ITGBL1O95965 494 aaPredicted RBP28.46■■■□□ 2.15
MCF2L2-210ENST00000478652 GNAI1P63096 354 aa28.46■■■□□ 2.15
MCF2L2-210ENST00000478652 FAM89AQ96GI7 184 aa28.46■■■□□ 2.15
MCF2L2-210ENST00000478652 PHAXQ9H814 394 aaKnown RBP28.46■■■□□ 2.15
MCF2L2-210ENST00000478652 CREBZFQ9NS37 354 aa28.46■■■□□ 2.15
MCF2L2-210ENST00000478652 GRAPQ13588 217 aa28.45■■■□□ 2.14
MCF2L2-210ENST00000478652 DDX46Q7L014 1031 aaKnown RBP28.45■■■□□ 2.14
MCF2L2-210ENST00000478652 SP8Q8IXZ3 490 aa28.45■■■□□ 2.14
MCF2L2-210ENST00000478652 NIM1KQ8IY84 436 aa28.45■■■□□ 2.14
MCF2L2-210ENST00000478652 C8orf58Q8NAV2 365 aa28.45■■■□□ 2.14
MCF2L2-210ENST00000478652 GRAPLQ8TC17 118 aaPredicted RBP28.45■■■□□ 2.14
MCF2L2-210ENST00000478652 CLEC11AQ9Y240 323 aa28.45■■■□□ 2.14
MCF2L2-210ENST00000478652 BBOX1O75936 387 aa28.44■■■□□ 2.14
MCF2L2-210ENST00000478652 SCNN1DP51172 638 aa28.44■■■□□ 2.14
MCF2L2-210ENST00000478652 RTL5Q5HYW3 569 aaPredicted RBP28.44■■■□□ 2.14
MCF2L2-210ENST00000478652 RTFDC1Q9BY42 306 aaPredicted RBP28.44■■■□□ 2.14
MCF2L2-210ENST00000478652 TRPM7Q96QT4 1865 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms