RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 PLVAPQ9BX97 442 aa9.94□□□□□ -0.82
SYCP3-205ENST00000478238 VRTNQ9H8Y1 702 aa9.94□□□□□ -0.82
SYCP3-205ENST00000478238 C1QTNF9BB2RNN3 333 aa9.93□□□□□ -0.82
SYCP3-205ENST00000478238 HIF1AQ16665 826 aa9.93□□□□□ -0.82
SYCP3-205ENST00000478238 BTLAQ7Z6A9 289 aa9.93□□□□□ -0.82
SYCP3-205ENST00000478238 CD163Q86VB7 1156 aa9.93□□□□□ -0.82
SYCP3-205ENST00000478238 CHRNA4P43681 627 aa9.92□□□□□ -0.82
SYCP3-205ENST00000478238 IGFBP4P22692 258 aa9.91□□□□□ -0.82
SYCP3-205ENST00000478238 ADH7P40394 386 aa9.91□□□□□ -0.82
SYCP3-205ENST00000478238 RTN1Q16799 776 aa9.91□□□□□ -0.82
SYCP3-205ENST00000478238 STARD13Q9Y3M8 1113 aa9.91□□□□□ -0.82
SYCP3-205ENST00000478238 M0R082 166 aa9.9□□□□□ -0.82
SYCP3-205ENST00000478238 ZNF417Q8TAU3 575 aa9.9□□□□□ -0.82
SYCP3-205ENST00000478238 BHMTQ93088 406 aa9.9□□□□□ -0.82
SYCP3-205ENST00000478238 ZNF587Q96SQ5 575 aaPredicted RBP9.9□□□□□ -0.82
SYCP3-205ENST00000478238 ALBP02768 609 aa9.89□□□□□ -0.83
SYCP3-205ENST00000478238 CFAP70Q5T0N1 1121 aa9.89□□□□□ -0.83
SYCP3-205ENST00000478238 IER5Q5VY09 327 aa9.89□□□□□ -0.83
SYCP3-205ENST00000478238 ARXQ96QS3 562 aa9.89□□□□□ -0.83
SYCP3-205ENST00000478238 ZNF777Q9ULD5 760 aaPredicted RBP9.89□□□□□ -0.83
SYCP3-205ENST00000478238 TGFBR3LH3BV60 316 aa9.88□□□□□ -0.83
SYCP3-205ENST00000478238 K7ELQ4 463 aaPredicted RBP9.88□□□□□ -0.83
SYCP3-205ENST00000478238 SPATA31C1P0DKV0 1188 aa9.88□□□□□ -0.83
SYCP3-205ENST00000478238 MICALL1Q8N3F8 863 aa9.88□□□□□ -0.83
SYCP3-205ENST00000478238 PRDM6Q9NQX0 595 aa9.88□□□□□ -0.83
SYCP3-205ENST00000478238 BCS1LQ9Y276 419 aa9.88□□□□□ -0.83
SYCP3-205ENST00000478238 SPDYE3A6NKU9 549 aa9.87□□□□□ -0.83
SYCP3-205ENST00000478238 COL9A3Q14050 684 aaPredicted RBP9.87□□□□□ -0.83
SYCP3-205ENST00000478238 C8orf86Q6ZUL3 223 aa9.87□□□□□ -0.83
SYCP3-205ENST00000478238 DMGDHQ9UI17 866 aaKnown RBP9.87□□□□□ -0.83
SYCP3-205ENST00000478238 FURINP09958 794 aa9.86□□□□□ -0.83
SYCP3-205ENST00000478238 WEE1P30291 646 aa9.85□□□□□ -0.83
SYCP3-205ENST00000478238 C20orf204Q6ZNR8 217 aa9.85□□□□□ -0.83
SYCP3-205ENST00000478238 UBE2OQ9C0C9 1292 aaKnown RBP9.85□□□□□ -0.83
SYCP3-205ENST00000478238 TBC1D8BQ0IIM8 1120 aa9.84□□□□□ -0.83
SYCP3-205ENST00000478238 PRRT3Q5FWE3 981 aa9.84□□□□□ -0.83
SYCP3-205ENST00000478238 GSX2Q9BZM3 304 aa9.84□□□□□ -0.83
SYCP3-205ENST00000478238 EFCC1Q9HA90 598 aa9.84□□□□□ -0.83
SYCP3-205ENST00000478238 KLK14Q9P0G3 267 aa9.84□□□□□ -0.83
SYCP3-205ENST00000478238 FOXO3O43524 673 aa9.83□□□□□ -0.84
SYCP3-205ENST00000478238 NID1P14543 1247 aa9.83□□□□□ -0.84
SYCP3-205ENST00000478238 CDCA8Q53HL2 280 aa9.83□□□□□ -0.84
SYCP3-205ENST00000478238 FAM200AQ8TCP9 573 aa9.83□□□□□ -0.84
SYCP3-205ENST00000478238 IGFLR1Q9H665 355 aa9.83□□□□□ -0.84
SYCP3-205ENST00000478238 SLC6A14Q9UN76 642 aa9.83□□□□□ -0.84
SYCP3-205ENST00000478238 GTF3C3Q9Y5Q9 886 aa9.83□□□□□ -0.84
SYCP3-205ENST00000478238 FAM229AH3BQW9 127 aa9.82□□□□□ -0.84
SYCP3-205ENST00000478238 DGKZQ13574 1117 aa9.82□□□□□ -0.84
SYCP3-205ENST00000478238 CCINQ13939 588 aa9.82□□□□□ -0.84
SYCP3-205ENST00000478238 PNMA5Q96PV4 448 aa9.82□□□□□ -0.84
SYCP3-205ENST00000478238 QTRT2Q9H974 415 aaKnown RBP9.82□□□□□ -0.84
SYCP3-205ENST00000478238 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.82□□□□□ -0.84
SYCP3-205ENST00000478238 EPB42P16452 691 aa9.81□□□□□ -0.84
SYCP3-205ENST00000478238 RFX1P22670 979 aa9.81□□□□□ -0.84
SYCP3-205ENST00000478238 GRNP28799 593 aaKnown RBP9.81□□□□□ -0.84
SYCP3-205ENST00000478238 IDH3AP50213 366 aa9.81□□□□□ -0.84
SYCP3-205ENST00000478238 VTI1AQ96AJ9 217 aa9.81□□□□□ -0.84
SYCP3-205ENST00000478238 LILRB5O75023 590 aa9.8□□□□□ -0.84
SYCP3-205ENST00000478238 NFKB1P19838 968 aa9.8□□□□□ -0.84
SYCP3-205ENST00000478238 INPP5BP32019 993 aa9.8□□□□□ -0.84
SYCP3-205ENST00000478238 GATA4P43694 442 aa9.8□□□□□ -0.84
SYCP3-205ENST00000478238 DNAJB12Q9NXW2 375 aaKnown RBP9.8□□□□□ -0.84
SYCP3-205ENST00000478238 APBA3O96018 575 aa9.79□□□□□ -0.84
SYCP3-205ENST00000478238 TRIM28Q13263 835 aaKnown RBP9.79□□□□□ -0.84
SYCP3-205ENST00000478238 DOC2BQ14184 412 aa9.79□□□□□ -0.84
SYCP3-205ENST00000478238 MYO19Q96H55 970 aa9.79□□□□□ -0.84
SYCP3-205ENST00000478238 NOVA2Q9UNW9 492 aaKnown RBP9.79□□□□□ -0.84
SYCP3-205ENST00000478238 ARSDP51689 593 aa9.78□□□□□ -0.84
SYCP3-205ENST00000478238 NUDT8Q8WV74 236 aa9.78□□□□□ -0.84
SYCP3-205ENST00000478238 JPH1Q9HDC5 661 aaPredicted RBP9.78□□□□□ -0.84
SYCP3-205ENST00000478238 C11orf91Q3C1V1 193 aa9.77□□□□□ -0.85
SYCP3-205ENST00000478238 TRAPPC3LQ5T215 181 aa9.77□□□□□ -0.85
SYCP3-205ENST00000478238 NAGPAQ9UK23 515 aa9.77□□□□□ -0.85
SYCP3-205ENST00000478238 MICAL2O94851 1124 aa9.76□□□□□ -0.85
SYCP3-205ENST00000478238 PSAPL1Q6NUJ1 521 aa9.76□□□□□ -0.85
SYCP3-205ENST00000478238 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.76□□□□□ -0.85
SYCP3-205ENST00000478238 LRFN2Q9ULH4 789 aa9.76□□□□□ -0.85
SYCP3-205ENST00000478238 FKBP5Q13451 457 aaPredicted RBP9.75□□□□□ -0.85
SYCP3-205ENST00000478238 GRIK4Q16099 956 aa9.75□□□□□ -0.85
SYCP3-205ENST00000478238 KRT25Q7Z3Z0 450 aa9.75□□□□□ -0.85
SYCP3-205ENST00000478238 NACC1Q96RE7 527 aa9.75□□□□□ -0.85
SYCP3-205ENST00000478238 ZMIZ1Q9ULJ6 1067 aa9.75□□□□□ -0.85
SYCP3-205ENST00000478238 MAP3K6O95382 1288 aa9.74□□□□□ -0.85
SYCP3-205ENST00000478238 SWI5Q1ZZU3 235 aa9.74□□□□□ -0.85
SYCP3-205ENST00000478238 PRIMPOLQ96LW4 560 aa9.74□□□□□ -0.85
SYCP3-205ENST00000478238 C11orf16Q9NQ32 467 aa9.74□□□□□ -0.85
SYCP3-205ENST00000478238 ZFATQ9P243 1243 aa9.74□□□□□ -0.85
SYCP3-205ENST00000478238 ACIN1Q9UKV3 1341 aaKnown RBP9.74□□□□□ -0.85
SYCP3-205ENST00000478238 A0A0A0MRY4 1105 aa9.73□□□□□ -0.85
SYCP3-205ENST00000478238 TARSP26639 723 aaKnown RBP9.73□□□□□ -0.85
SYCP3-205ENST00000478238 AFF1P51825 1210 aaKnown RBP9.73□□□□□ -0.85
SYCP3-205ENST00000478238 ELOAQ14241 798 aaKnown RBP9.73□□□□□ -0.85
SYCP3-205ENST00000478238 PCSK7Q16549 785 aa9.73□□□□□ -0.85
SYCP3-205ENST00000478238 IFT43Q96FT9 208 aa9.73□□□□□ -0.85
SYCP3-205ENST00000478238 RGS9O75916 674 aaPredicted RBP9.72□□□□□ -0.85
SYCP3-205ENST00000478238 DHX32Q7L7V1 743 aaKnown RBP9.72□□□□□ -0.85
SYCP3-205ENST00000478238 FAM35AQ86V20 835 aa9.72□□□□□ -0.85
SYCP3-205ENST00000478238 SEMA6BQ9H3T3 888 aa9.72□□□□□ -0.85
SYCP3-205ENST00000478238 OPLAHO14841 1288 aa9.71□□□□□ -0.86
SYCP3-205ENST00000478238 PRMT3O60678 531 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms