RNA–Protein interactions for RNA: ENST00000478087.5

HPS1-211, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 971 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-211ENST00000478087 C8orf58Q8NAV2 365 aa16.94■□□□□ 0.3
HPS1-211ENST00000478087 TCIRG1Q13488 830 aa16.93■□□□□ 0.3
HPS1-211ENST00000478087 NLRP10Q86W26 655 aa16.93■□□□□ 0.3
HPS1-211ENST00000478087 UTP14AQ9BVJ6 771 aaKnown RBP16.93■□□□□ 0.3
HPS1-211ENST00000478087 ZNF277Q9NRM2 450 aaPredicted RBP16.93■□□□□ 0.3
HPS1-211ENST00000478087 IFT57Q9NWB7 429 aa16.93■□□□□ 0.3
HPS1-211ENST00000478087 LTBP3Q9NS15 1303 aa16.93■□□□□ 0.3
HPS1-211ENST00000478087 HCLS1P14317 486 aaPredicted RBP16.92■□□□□ 0.3
HPS1-211ENST00000478087 ALDH1B1P30837 517 aa16.92■□□□□ 0.3
HPS1-211ENST00000478087 CCDC93Q567U6 631 aa16.92■□□□□ 0.3
HPS1-211ENST00000478087 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
HPS1-211ENST00000478087 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
HPS1-211ENST00000478087 IBTKQ9P2D0 1353 aaPredicted RBP16.91■□□□□ 0.3
HPS1-211ENST00000478087 ANP32CO43423 234 aa16.91■□□□□ 0.3
HPS1-211ENST00000478087 DDNO94850 711 aaPredicted RBP16.91■□□□□ 0.3
HPS1-211ENST00000478087 HOXA10P31260 410 aaPredicted RBP16.91■□□□□ 0.3
HPS1-211ENST00000478087 GNAI1P63096 354 aa16.91■□□□□ 0.3
HPS1-211ENST00000478087 PARP10Q53GL7 1025 aa16.91■□□□□ 0.3
HPS1-211ENST00000478087 SLC10A5Q5PT55 438 aa16.91■□□□□ 0.3
HPS1-211ENST00000478087 C16orf71Q8IYS4 520 aaPredicted RBP16.91■□□□□ 0.3
HPS1-211ENST00000478087 TSPYL6Q8N831 410 aa16.91■□□□□ 0.3
HPS1-211ENST00000478087 RPGRQ92834 1020 aaKnown RBP16.91■□□□□ 0.3
HPS1-211ENST00000478087 PHAXQ9H814 394 aaKnown RBP16.91■□□□□ 0.3
HPS1-211ENST00000478087 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
HPS1-211ENST00000478087 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
HPS1-211ENST00000478087 ATP5J2-PTCD1G3V325 749 aa16.9■□□□□ 0.3
HPS1-211ENST00000478087 HOXB7P09629 217 aa16.9■□□□□ 0.3
HPS1-211ENST00000478087 HTRA3P83110 453 aa16.9■□□□□ 0.3
HPS1-211ENST00000478087 FKBP4Q02790 459 aaKnown RBP eCLIP16.9■□□□□ 0.3
HPS1-211ENST00000478087 SOGA3Q5TF21 947 aa16.9■□□□□ 0.3
HPS1-211ENST00000478087 ANKRD13DQ6ZTN6 518 aa16.9■□□□□ 0.3
HPS1-211ENST00000478087 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
HPS1-211ENST00000478087 TSR2Q969E8 191 aaKnown RBP16.9■□□□□ 0.3
HPS1-211ENST00000478087 SALL2Q9Y467 1007 aaPredicted RBP16.9■□□□□ 0.3
HPS1-211ENST00000478087 DDX60Q8IY21 1712 aaKnown RBP16.9■□□□□ 0.3
HPS1-211ENST00000478087 WDR90Q96KV7 1748 aa16.9■□□□□ 0.3
HPS1-211ENST00000478087 SNED1Q8TER0 1413 aa16.89■□□□□ 0.29
HPS1-211ENST00000478087 VEGFAP15692 232 aaPredicted RBP16.89■□□□□ 0.29
HPS1-211ENST00000478087 PLBD2Q8NHP8 589 aa16.89■□□□□ 0.29
HPS1-211ENST00000478087 NLRP3Q96P20 1036 aa16.89■□□□□ 0.29
HPS1-211ENST00000478087 TRMT112Q9UI30 125 aaKnown RBP16.89■□□□□ 0.29
HPS1-211ENST00000478087 RIC1Q4ADV7 1423 aa16.88■□□□□ 0.29
HPS1-211ENST00000478087 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
HPS1-211ENST00000478087 RTL5Q5HYW3 569 aaPredicted RBP16.88■□□□□ 0.29
HPS1-211ENST00000478087 DPY19L2Q6NUT2 758 aa16.88■□□□□ 0.29
HPS1-211ENST00000478087 WWC1Q8IX03 1113 aa16.88■□□□□ 0.29
HPS1-211ENST00000478087 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
HPS1-211ENST00000478087 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
HPS1-211ENST00000478087 HYPKQ9NX55 129 aa16.88■□□□□ 0.29
HPS1-211ENST00000478087 COL4A5P29400 1685 aa16.88■□□□□ 0.29
HPS1-211ENST00000478087 RTKN2Q8IZC4 609 aa16.87■□□□□ 0.29
HPS1-211ENST00000478087 ISCA1Q9BUE6 129 aa16.87■□□□□ 0.29
HPS1-211ENST00000478087 CALD1Q05682 793 aaKnown RBP16.86■□□□□ 0.29
HPS1-211ENST00000478087 FAM89AQ96GI7 184 aa16.86■□□□□ 0.29
HPS1-211ENST00000478087 ZNF541Q9H0D2 1346 aa16.86■□□□□ 0.29
HPS1-211ENST00000478087 COL4A1P02462 1669 aa16.85■□□□□ 0.29
HPS1-211ENST00000478087 PPEF1O14829 653 aaPredicted RBP16.85■□□□□ 0.29
HPS1-211ENST00000478087 POTEIP0CG38 1075 aa16.85■□□□□ 0.29
HPS1-211ENST00000478087 POTEJP0CG39 1038 aa16.85■□□□□ 0.29
HPS1-211ENST00000478087 IARSP41252 1262 aaKnown RBP16.85■□□□□ 0.29
HPS1-211ENST00000478087 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
HPS1-211ENST00000478087 ABCC4O15439 1325 aa16.85■□□□□ 0.29
HPS1-211ENST00000478087 CCDC27Q2M243 656 aa16.84■□□□□ 0.29
HPS1-211ENST00000478087 RIC3Q7Z5B4 369 aa16.84■□□□□ 0.29
HPS1-211ENST00000478087 DNAJC5GQ8N7S2 189 aa16.84■□□□□ 0.29
HPS1-211ENST00000478087 SH3TC1Q8TE82 1336 aa16.84■□□□□ 0.29
HPS1-211ENST00000478087 SCN4AP35499 1836 aa16.83■□□□□ 0.28
HPS1-211ENST00000478087 APLP1P51693 650 aa16.83■□□□□ 0.28
HPS1-211ENST00000478087 FSTL1Q12841 308 aa16.83■□□□□ 0.28
HPS1-211ENST00000478087 PSMD1Q99460 953 aa16.83■□□□□ 0.28
HPS1-211ENST00000478087 PCNTO95613 3336 aa16.82■□□□□ 0.28
HPS1-211ENST00000478087 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
HPS1-211ENST00000478087 SMC1BQ8NDV3 1235 aa16.82■□□□□ 0.28
HPS1-211ENST00000478087 MYD88Q99836 296 aa16.82■□□□□ 0.28
HPS1-211ENST00000478087 ATP6V0A2Q9Y487 856 aa16.82■□□□□ 0.28
HPS1-211ENST00000478087 RNF123Q5XPI4 1314 aa16.81■□□□□ 0.28
HPS1-211ENST00000478087 FZD9O00144 591 aa16.81■□□□□ 0.28
HPS1-211ENST00000478087 CCDC30Q5VVM6 783 aa16.81■□□□□ 0.28
HPS1-211ENST00000478087 CC2D2BQ6DHV5 1058 aa16.81■□□□□ 0.28
HPS1-211ENST00000478087 G2E3Q7L622 706 aa16.81■□□□□ 0.28
HPS1-211ENST00000478087 GOLGA2Q08379 1002 aa16.8■□□□□ 0.28
HPS1-211ENST00000478087 TRIM28Q13263 835 aaKnown RBP16.8■□□□□ 0.28
HPS1-211ENST00000478087 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
HPS1-211ENST00000478087 CACNA1FO60840 1977 aa16.79■□□□□ 0.28
HPS1-211ENST00000478087 BBOX1O75936 387 aa16.79■□□□□ 0.28
HPS1-211ENST00000478087 TWISTNBQ3B726 338 aaPredicted RBP16.79■□□□□ 0.28
HPS1-211ENST00000478087 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
HPS1-211ENST00000478087 LARGE2Q8N3Y3 721 aa16.79■□□□□ 0.28
HPS1-211ENST00000478087 CELF1Q92879 486 aaKnown RBP16.79■□□□□ 0.28
HPS1-211ENST00000478087 IRS4O14654 1257 aaPredicted RBP16.78■□□□□ 0.28
HPS1-211ENST00000478087 GRAPQ13588 217 aa16.78■□□□□ 0.28
HPS1-211ENST00000478087 AOC3Q16853 763 aa16.78■□□□□ 0.28
HPS1-211ENST00000478087 SP8Q8IXZ3 490 aa16.78■□□□□ 0.28
HPS1-211ENST00000478087 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
HPS1-211ENST00000478087 JDP2Q8WYK2 163 aa16.78■□□□□ 0.28
HPS1-211ENST00000478087 L3MBTL3Q96JM7 780 aaPredicted RBP16.78■□□□□ 0.28
HPS1-211ENST00000478087 TAF1DQ9H5J8 278 aaPredicted RBP16.78■□□□□ 0.28
HPS1-211ENST00000478087 MAP3K2Q9Y2U5 619 aa16.78■□□□□ 0.28
HPS1-211ENST00000478087 GJA3Q9Y6H8 435 aa16.78■□□□□ 0.28
HPS1-211ENST00000478087 LTBP1Q14766 1721 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms