RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.73
PTPRN-214ENST00000477819 TESK2Q96S53 571 aa10.52□□□□□ -0.73
PTPRN-214ENST00000477819 MCOLN1Q9GZU1 580 aa10.52□□□□□ -0.73
PTPRN-214ENST00000477819 ABT1Q9ULW3 272 aaKnown RBP10.52□□□□□ -0.73
PTPRN-214ENST00000477819 TJP1Q07157 1748 aa10.52□□□□□ -0.73
PTPRN-214ENST00000477819 NRXN2Q9P2S2 1712 aa10.51□□□□□ -0.73
PTPRN-214ENST00000477819 MAP1SQ66K74 1059 aaPredicted RBP10.51□□□□□ -0.73
PTPRN-214ENST00000477819 BCL2L12Q9HB09 334 aa10.51□□□□□ -0.73
PTPRN-214ENST00000477819 SCN4AP35499 1836 aa10.5□□□□□ -0.73
PTPRN-214ENST00000477819 KIF20BQ96Q89 1820 aa10.5□□□□□ -0.73
PTPRN-214ENST00000477819 IQCA1LA6NCM1 817 aa10.5□□□□□ -0.73
PTPRN-214ENST00000477819 FMR1Q06787 632 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPRN-214ENST00000477819 BICDL1Q6ZP65 573 aa10.5□□□□□ -0.73
PTPRN-214ENST00000477819 PAXIP1Q6ZW49 1069 aaPredicted RBP10.5□□□□□ -0.73
PTPRN-214ENST00000477819 DNAJC10Q8IXB1 793 aa10.5□□□□□ -0.73
PTPRN-214ENST00000477819 CNTROBQ8N137 903 aa10.5□□□□□ -0.73
PTPRN-214ENST00000477819 NFATC2IPQ8NCF5 419 aa10.5□□□□□ -0.73
PTPRN-214ENST00000477819 TAOK3Q9H2K8 898 aa10.5□□□□□ -0.73
PTPRN-214ENST00000477819 SOS1Q07889 1333 aaPredicted RBP10.5□□□□□ -0.73
PTPRN-214ENST00000477819 ANKRD31Q8N7Z5 1873 aa10.49□□□□□ -0.73
PTPRN-214ENST00000477819 ST20-MTHFSA0A0A6YYL1 179 aa10.49□□□□□ -0.73
PTPRN-214ENST00000477819 CYP4F22Q6NT55 531 aa10.49□□□□□ -0.73
PTPRN-214ENST00000477819 ZNF530Q6P9A1 599 aaPredicted RBP10.49□□□□□ -0.73
PTPRN-214ENST00000477819 PLPP6Q8IY26 295 aa10.49□□□□□ -0.73
PTPRN-214ENST00000477819 CAPNS2Q96L46 248 aa10.49□□□□□ -0.73
PTPRN-214ENST00000477819 BEGAINQ9BUH8 593 aa10.49□□□□□ -0.73
PTPRN-214ENST00000477819 NARFQ9UHQ1 456 aa10.49□□□□□ -0.73
PTPRN-214ENST00000477819 LHX6Q9UPM6 363 aa10.49□□□□□ -0.73
PTPRN-214ENST00000477819 WASHC2AQ641Q2 1341 aa10.49□□□□□ -0.73
PTPRN-214ENST00000477819 SLX4Q8IY92 1834 aa10.49□□□□□ -0.73
PTPRN-214ENST00000477819 COL11A2P13942 1736 aaPredicted RBP10.48□□□□□ -0.73
PTPRN-214ENST00000477819 AOC2O75106 756 aa10.48□□□□□ -0.73
PTPRN-214ENST00000477819 FOXK1P85037 733 aa10.48□□□□□ -0.73
PTPRN-214ENST00000477819 GPR101Q96P66 508 aaPredicted RBP10.48□□□□□ -0.73
PTPRN-214ENST00000477819 GPHNQ9NQX3 736 aaPredicted RBP10.48□□□□□ -0.73
PTPRN-214ENST00000477819 ZNF541Q9H0D2 1346 aa10.48□□□□□ -0.73
PTPRN-214ENST00000477819 ADAMTSL1Q8N6G6 1762 aa10.47□□□□□ -0.73
PTPRN-214ENST00000477819 CACNA1SQ13698 1873 aa10.47□□□□□ -0.73
PTPRN-214ENST00000477819 HSP90AB1P08238 724 aaKnown RBP10.47□□□□□ -0.73
PTPRN-214ENST00000477819 EPHX2P34913 555 aa10.47□□□□□ -0.73
PTPRN-214ENST00000477819 MTHFSP49914 203 aa10.47□□□□□ -0.73
PTPRN-214ENST00000477819 DSG2Q14126 1118 aa10.47□□□□□ -0.73
PTPRN-214ENST00000477819 EIF4A2Q14240 407 aaKnown RBP10.47□□□□□ -0.73
PTPRN-214ENST00000477819 CARD14Q9BXL6 1004 aa10.47□□□□□ -0.73
PTPRN-214ENST00000477819 HACL1Q9UJ83 578 aa10.47□□□□□ -0.73
PTPRN-214ENST00000477819 LTBP3Q9NS15 1303 aa10.47□□□□□ -0.73
PTPRN-214ENST00000477819 CYP19A1P11511 503 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-214ENST00000477819 SOX10P56693 466 aa10.46□□□□□ -0.73
PTPRN-214ENST00000477819 DGKZQ13574 1117 aa10.46□□□□□ -0.73
PTPRN-214ENST00000477819 DDX21Q9NR30 783 aaKnown RBP eCLIP10.46□□□□□ -0.73
PTPRN-214ENST00000477819 ZBTB1Q9Y2K1 713 aa10.46□□□□□ -0.73
PTPRN-214ENST00000477819 RNF123Q5XPI4 1314 aa10.46□□□□□ -0.73
PTPRN-214ENST00000477819 COL15A1P39059 1388 aa10.46□□□□□ -0.74
PTPRN-214ENST00000477819 LTBP1Q14766 1721 aa10.46□□□□□ -0.74
PTPRN-214ENST00000477819 ANKRD26Q9UPS8 1709 aa10.45□□□□□ -0.74
PTPRN-214ENST00000477819 THSD7BQ9C0I4 1608 aa10.45□□□□□ -0.74
PTPRN-214ENST00000477819 PLEKHO1Q53GL0 409 aaPredicted RBP10.45□□□□□ -0.74
PTPRN-214ENST00000477819 BRIP1Q9BX63 1249 aa10.45□□□□□ -0.74
PTPRN-214ENST00000477819 ZNF277Q9NRM2 450 aaPredicted RBP10.45□□□□□ -0.74
PTPRN-214ENST00000477819 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
PTPRN-214ENST00000477819 POLKQ9UBT6 870 aa10.45□□□□□ -0.74
PTPRN-214ENST00000477819 PDE6BP35913 854 aa10.44□□□□□ -0.74
PTPRN-214ENST00000477819 TBC1D9BQ66K14 1250 aa10.44□□□□□ -0.74
PTPRN-214ENST00000477819 PRR5LQ6MZQ0 368 aa10.44□□□□□ -0.74
PTPRN-214ENST00000477819 PRPF40BQ6NWY9 871 aaKnown RBP10.44□□□□□ -0.74
PTPRN-214ENST00000477819 OLFM4Q6UX06 510 aa10.44□□□□□ -0.74
PTPRN-214ENST00000477819 TRAF5O00463 557 aa10.43□□□□□ -0.74
PTPRN-214ENST00000477819 CANXP27824 592 aaKnown RBP10.43□□□□□ -0.74
PTPRN-214ENST00000477819 ECE1P42892 770 aa10.43□□□□□ -0.74
PTPRN-214ENST00000477819 TNNT2P45379 298 aaPredicted RBP10.43□□□□□ -0.74
PTPRN-214ENST00000477819 SLC39A6Q13433 755 aa10.43□□□□□ -0.74
PTPRN-214ENST00000477819 CST9Q5W186 159 aa10.43□□□□□ -0.74
PTPRN-214ENST00000477819 ANKRD13DQ6ZTN6 518 aa10.43□□□□□ -0.74
PTPRN-214ENST00000477819 PNMA8AQ86V59 439 aaPredicted RBP10.43□□□□□ -0.74
PTPRN-214ENST00000477819 GTPBP6O43824 516 aaPredicted RBP10.42□□□□□ -0.74
PTPRN-214ENST00000477819 C1orf141Q5JVX7 400 aa10.42□□□□□ -0.74
PTPRN-214ENST00000477819 PRPF38BQ5VTL8 546 aaKnown RBP10.42□□□□□ -0.74
PTPRN-214ENST00000477819 AEBP1Q8IUX7 1158 aa10.42□□□□□ -0.74
PTPRN-214ENST00000477819 C7orf43Q8WVR3 580 aa10.42□□□□□ -0.74
PTPRN-214ENST00000477819 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
PTPRN-214ENST00000477819 SRGNP10124 158 aa10.41□□□□□ -0.74
PTPRN-214ENST00000477819 MAP2K2P36507 400 aa10.41□□□□□ -0.74
PTPRN-214ENST00000477819 STYK1Q6J9G0 422 aa10.41□□□□□ -0.74
PTPRN-214ENST00000477819 PTCD2Q8WV60 388 aaKnown RBP10.41□□□□□ -0.74
PTPRN-214ENST00000477819 PDZRN3Q9UPQ7 1066 aa10.41□□□□□ -0.74
PTPRN-214ENST00000477819 TRPM7Q96QT4 1865 aa10.4□□□□□ -0.74
PTPRN-214ENST00000477819 FKBP4Q02790 459 aaKnown RBP eCLIP10.4□□□□□ -0.74
PTPRN-214ENST00000477819 AMOTQ4VCS5 1084 aa10.4□□□□□ -0.74
PTPRN-214ENST00000477819 SOGA3Q5TF21 947 aa10.4□□□□□ -0.74
PTPRN-214ENST00000477819 POTEEQ6S8J3 1075 aa10.4□□□□□ -0.74
PTPRN-214ENST00000477819 RNF166Q96A37 237 aaPredicted RBP10.4□□□□□ -0.74
PTPRN-214ENST00000477819 LGR6Q9HBX8 967 aa10.4□□□□□ -0.74
PTPRN-214ENST00000477819 TBC1D2BQ9UPU7 963 aa10.4□□□□□ -0.74
PTPRN-214ENST00000477819 TLL2Q9Y6L7 1015 aa10.4□□□□□ -0.74
PTPRN-214ENST00000477819 EIF5P55010 431 aaKnown RBP10.39□□□□□ -0.75
PTPRN-214ENST00000477819 LSM11P83369 360 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTPRN-214ENST00000477819 CCDC93Q567U6 631 aa10.39□□□□□ -0.75
PTPRN-214ENST00000477819 CIAPIN1Q6FI81 312 aa10.39□□□□□ -0.75
PTPRN-214ENST00000477819 MASTLQ96GX5 879 aa10.39□□□□□ -0.75
PTPRN-214ENST00000477819 ZIC5Q96T25 663 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms