RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 KDRP35968 1356 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 RGS12O14924 1447 aa11.62□□□□□ -0.55
CMC1-209ENST00000477739 CEP170BQ9Y4F5 1589 aaPredicted RBP11.62□□□□□ -0.55
CMC1-209ENST00000477739 VIRMAQ69YN4 1812 aaKnown RBP11.61□□□□□ -0.55
CMC1-209ENST00000477739 BRD1O95696 1058 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 SF3A1Q15459 793 aaKnown RBP11.61□□□□□ -0.55
CMC1-209ENST00000477739 CDC37L1Q7L3B6 337 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 KIF1BPQ96EK5 621 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 SPATA32Q96LK8 384 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 TOMM22Q9NS69 142 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 NRBP1Q9UHY1 535 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 TAF6LQ9Y6J9 622 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 GOLGA6L19H0YKK7 550 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 EIF4A1P60842 406 aaKnown RBP11.61□□□□□ -0.55
CMC1-209ENST00000477739 CCDC186Q7Z3E2 898 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 DNAJC25Q9H1X3 360 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 RBM8AQ9Y5S9 174 aaKnown RBP11.61□□□□□ -0.55
CMC1-209ENST00000477739 TPD52L1Q16890 204 aaPredicted RBP11.61□□□□□ -0.55
CMC1-209ENST00000477739 CCDC183Q5T5S1 534 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 BLOC1S2Q6QNY1 142 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 PPP1R9BQ96SB3 815 aa11.61□□□□□ -0.55
CMC1-209ENST00000477739 DBF4Q9UBU7 674 aaPredicted RBP11.61□□□□□ -0.55
CMC1-209ENST00000477739 LIG1P18858 919 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 NMIQ13287 307 aaPredicted RBP11.6□□□□□ -0.55
CMC1-209ENST00000477739 AKAP4Q5JQC9 854 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 OTUD7BQ6GQQ9 843 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 SASS6Q6UVJ0 657 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 MYD88Q99836 296 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 CSPP1Q1MSJ5 1256 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 HSP90AB4PQ58FF6 505 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 KRT28Q7Z3Y7 464 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 CCAR2Q8N163 923 aaKnown RBP11.6□□□□□ -0.55
CMC1-209ENST00000477739 CCDC82Q8N4S0 544 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 CABLES1Q8TDN4 633 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 PYCARDQ9ULZ3 195 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 SETD1AO15047 1707 aaKnown RBP11.6□□□□□ -0.55
CMC1-209ENST00000477739 SRCAPQ6ZRS2 3230 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 C3P01024 1663 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 F13A1P00488 732 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 RUFY2Q8WXA3 655 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 NUP62CLQ9H1M0 184 aa11.6□□□□□ -0.55
CMC1-209ENST00000477739 UBR1Q8IWV7 1749 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 DDX58O95786 925 aaKnown RBP11.59□□□□□ -0.55
CMC1-209ENST00000477739 CHRNA2Q15822 529 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 ANO6Q4KMQ2 910 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 MON2Q7Z3U7 1717 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 DLG5Q8TDM6 1919 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
CMC1-209ENST00000477739 NCOA5Q9HCD5 579 aaKnown RBP11.59□□□□□ -0.55
CMC1-209ENST00000477739 ATP6V1DQ9Y5K8 247 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 SSH2Q76I76 1423 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 DIP2AQ14689 1571 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 U2AF2P26368 475 aaKnown RBP eCLIP11.59□□□□□ -0.555e-7■■■■□ 23.9
CMC1-209ENST00000477739 MCM2P49736 904 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 GNL2Q13823 731 aaKnown RBP11.59□□□□□ -0.55
CMC1-209ENST00000477739 ME3Q16798 604 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 WASHC4Q2M389 1173 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 ZNF771Q7L3S4 317 aaPredicted RBP11.59□□□□□ -0.55
CMC1-209ENST00000477739 UBE3BQ7Z3V4 1068 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 CCDC144CPQ8IYA2 1237 aa11.59□□□□□ -0.55
CMC1-209ENST00000477739 POLR3DP05423 398 aaPredicted RBP11.58□□□□□ -0.56
CMC1-209ENST00000477739 ATF3P18847 181 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 KRT85P78386 507 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 NEXNQ0ZGT2 675 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 LARP1Q6PKG0 1096 aaKnown RBP11.58□□□□□ -0.56
CMC1-209ENST00000477739 ERICH4A6NGS2 130 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 APPP05067 770 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 CCDC192P0DO97 292 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 ME1P48163 572 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 BRF1Q92994 677 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 SDF4Q9BRK5 362 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 OSBPL3Q9H4L5 887 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.58□□□□□ -0.56
CMC1-209ENST00000477739 HDAC5Q9UQL6 1122 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 RNMTO43148 476 aaKnown RBP11.58□□□□□ -0.56
CMC1-209ENST00000477739 TTC5Q8N0Z6 440 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 KIF3AQ9Y496 699 aa11.58□□□□□ -0.56
CMC1-209ENST00000477739 IBTKQ9P2D0 1353 aaPredicted RBP11.58□□□□□ -0.56
CMC1-209ENST00000477739 BABAM1Q9NWV8 329 aa11.57□□□□□ -0.56
CMC1-209ENST00000477739 RXRAP19793 462 aa11.57□□□□□ -0.56
CMC1-209ENST00000477739 ARID5BQ14865 1188 aa11.57□□□□□ -0.56
CMC1-209ENST00000477739 BICC1Q9H694 974 aaKnown RBP11.57□□□□□ -0.56
CMC1-209ENST00000477739 ECHDC1Q9NTX5 307 aa11.57□□□□□ -0.56
CMC1-209ENST00000477739 SGSM2O43147 1006 aa11.57□□□□□ -0.56
CMC1-209ENST00000477739 SSH3Q8TE77 659 aa11.57□□□□□ -0.56
CMC1-209ENST00000477739 A0A0D9SFI3 127 aa11.56□□□□□ -0.56
CMC1-209ENST00000477739 TULP1O00294 542 aaPredicted RBP11.56□□□□□ -0.56
CMC1-209ENST00000477739 GLRX3O76003 335 aaKnown RBP11.56□□□□□ -0.56
CMC1-209ENST00000477739 SMC2O95347 1197 aa11.56□□□□□ -0.56
CMC1-209ENST00000477739 MAP3K11Q16584 847 aa11.56□□□□□ -0.56
CMC1-209ENST00000477739 TPCN1Q9ULQ1 816 aa11.56□□□□□ -0.56
CMC1-209ENST00000477739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.56□□□□□ -0.56
CMC1-209ENST00000477739 ANKARQ7Z5J8 1434 aa11.56□□□□□ -0.56
CMC1-209ENST00000477739 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
CMC1-209ENST00000477739 TATP17735 454 aaPredicted RBP11.56□□□□□ -0.56
CMC1-209ENST00000477739 UBE2HP62256 183 aa11.56□□□□□ -0.56
CMC1-209ENST00000477739 BEND3Q5T5X7 828 aa11.56□□□□□ -0.56
CMC1-209ENST00000477739 TTLL5Q6EMB2 1281 aa11.56□□□□□ -0.56
CMC1-209ENST00000477739 GOLGA6L6A8MZA4 724 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms