RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 NEMFO60524 1076 aa15.85■□□□□ 0.13
DFFB-209ENST00000477548 SLFNL1Q499Z3 407 aa15.85■□□□□ 0.13
DFFB-209ENST00000477548 SPATA32Q96LK8 384 aa15.85■□□□□ 0.13
DFFB-209ENST00000477548 LRRFIP2Q9Y608 721 aaKnown RBP15.85■□□□□ 0.13
DFFB-209ENST00000477548 CAPN2P17655 700 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 BMS1Q14692 1282 aaKnown RBP15.84■□□□□ 0.13
DFFB-209ENST00000477548 CDC37L1Q7L3B6 337 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 CNTROBQ8N137 903 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 CLSTN2Q9H4D0 955 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 TFIP11Q9UBB9 837 aaKnown RBP15.84■□□□□ 0.13
DFFB-209ENST00000477548 TUBGCP6Q96RT7 1819 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 TULP2O00295 520 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 CDC25BP30305 580 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 VPS53Q5VIR6 699 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 NYAP1Q6ZVC0 841 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 BICD2Q8TD16 824 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 COG3Q96JB2 828 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 CYP46A1Q9Y6A2 500 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 UBR1Q8IWV7 1749 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 GTF3C6Q969F1 213 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 STK31Q9BXU1 1019 aa15.84■□□□□ 0.13
DFFB-209ENST00000477548 SCAND2PQ9GZW5 306 aaPredicted RBP15.84■□□□□ 0.13
DFFB-209ENST00000477548 HTATSF1O43719 755 aaKnown RBP15.83■□□□□ 0.12
DFFB-209ENST00000477548 RNF20Q5VTR2 975 aa15.83■□□□□ 0.12
DFFB-209ENST00000477548 DDX54Q8TDD1 881 aaKnown RBP15.83■□□□□ 0.12
DFFB-209ENST00000477548 KIF1BPQ96EK5 621 aa15.83■□□□□ 0.12
DFFB-209ENST00000477548 ZNF446Q9NWS9 450 aa15.83■□□□□ 0.12
DFFB-209ENST00000477548 NPHP3Q7Z494 1330 aa15.83■□□□□ 0.12
DFFB-209ENST00000477548 ME3Q16798 604 aa15.83■□□□□ 0.12
DFFB-209ENST00000477548 FILIP1Q7Z7B0 1213 aa15.83■□□□□ 0.12
DFFB-209ENST00000477548 TRIM34Q9BYJ4 488 aa15.83■□□□□ 0.12
DFFB-209ENST00000477548 FBXO3Q9UK99 471 aa15.83■□□□□ 0.12
DFFB-209ENST00000477548 CYP2C19P33261 490 aa15.82■□□□□ 0.12
DFFB-209ENST00000477548 ADCK5Q3MIX3 580 aa15.82■□□□□ 0.12
DFFB-209ENST00000477548 PRPF40BQ6NWY9 871 aaKnown RBP15.82■□□□□ 0.12
DFFB-209ENST00000477548 TSPYL4Q9UJ04 414 aa15.82■□□□□ 0.12
DFFB-209ENST00000477548 PTPRUQ92729 1446 aa15.82■□□□□ 0.12
DFFB-209ENST00000477548 CCDC69A6NI79 296 aa15.82■□□□□ 0.12
DFFB-209ENST00000477548 PATL2C9JE40 543 aaKnown RBP15.82■□□□□ 0.12
DFFB-209ENST00000477548 HNRNPH2P55795 449 aaKnown RBP15.82■□□□□ 0.12
DFFB-209ENST00000477548 TSPYL1Q9H0U9 437 aa15.82■□□□□ 0.12
DFFB-209ENST00000477548 NR1I2O75469 434 aa15.81■□□□□ 0.12
DFFB-209ENST00000477548 SURF6O75683 361 aaKnown RBP15.81■□□□□ 0.12
DFFB-209ENST00000477548 PDCP20941 246 aa15.81■□□□□ 0.12
DFFB-209ENST00000477548 ATP7BP35670 1465 aa15.81■□□□□ 0.12
DFFB-209ENST00000477548 ST3GAL1Q11201 340 aa15.81■□□□□ 0.12
DFFB-209ENST00000477548 RBM43Q6ZSC3 357 aaKnown RBP15.81■□□□□ 0.12
DFFB-209ENST00000477548 PI4K2BQ8TCG2 481 aa15.81■□□□□ 0.12
DFFB-209ENST00000477548 RBM33Q96EV2 1170 aaKnown RBP15.81■□□□□ 0.12
DFFB-209ENST00000477548 TTC21AQ8NDW8 1320 aa15.81■□□□□ 0.12
DFFB-209ENST00000477548 USP16Q9Y5T5 823 aa15.81■□□□□ 0.12
DFFB-209ENST00000477548 SOS1Q07889 1333 aaPredicted RBP15.8■□□□□ 0.12
DFFB-209ENST00000477548 CAVIN2O95810 425 aa15.8■□□□□ 0.12
DFFB-209ENST00000477548 HDGFP51858 240 aaKnown RBP15.8■□□□□ 0.12
DFFB-209ENST00000477548 ERCC6LQ2NKX8 1250 aa15.8■□□□□ 0.12
DFFB-209ENST00000477548 CERS3Q8IU89 383 aa15.8■□□□□ 0.12
DFFB-209ENST00000477548 CCAR2Q8N163 923 aaKnown RBP15.8■□□□□ 0.12
DFFB-209ENST00000477548 LEO1Q8WVC0 666 aaPredicted RBP15.8■□□□□ 0.12
DFFB-209ENST00000477548 AATKQ6ZMQ8 1374 aa15.8■□□□□ 0.12
DFFB-209ENST00000477548 MRFAP1L1Q96HT8 127 aa15.8■□□□□ 0.12
DFFB-209ENST00000477548 ZSWIM6Q9HCJ5 1215 aa15.8■□□□□ 0.12
DFFB-209ENST00000477548 BECN2A8MW95 431 aa15.79■□□□□ 0.12
DFFB-209ENST00000477548 KIF2AO00139 706 aaPredicted RBP15.79■□□□□ 0.12
DFFB-209ENST00000477548 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
DFFB-209ENST00000477548 UBTFL1P0CB47 393 aaPredicted RBP15.79■□□□□ 0.12
DFFB-209ENST00000477548 FLIIQ13045 1269 aa15.79■□□□□ 0.12
DFFB-209ENST00000477548 AMOTL2Q9Y2J4 779 aa15.79■□□□□ 0.12
DFFB-209ENST00000477548 ACEP12821 1306 aa15.79■□□□□ 0.12
DFFB-209ENST00000477548 RUFY2Q8WXA3 655 aa15.79■□□□□ 0.12
DFFB-209ENST00000477548 NECTIN2Q92692 538 aa15.79■□□□□ 0.12
DFFB-209ENST00000477548 TPCN1Q9ULQ1 816 aa15.79■□□□□ 0.12
DFFB-209ENST00000477548 ERBB3P21860 1342 aa15.79■□□□□ 0.12
DFFB-209ENST00000477548 EDC4Q6P2E9 1401 aaKnown RBP15.79■□□□□ 0.12
DFFB-209ENST00000477548 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.79■□□□□ 0.12
DFFB-209ENST00000477548 ZKSCAN1P17029 563 aaPredicted RBP15.78■□□□□ 0.12
DFFB-209ENST00000477548 PTH1RQ03431 593 aa15.78■□□□□ 0.12
DFFB-209ENST00000477548 SARM1Q6SZW1 724 aa15.78■□□□□ 0.12
DFFB-209ENST00000477548 TECPR2O15040 1411 aa15.78■□□□□ 0.12
DFFB-209ENST00000477548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.78■□□□□ 0.12
DFFB-209ENST00000477548 RAB11FIP3O75154 756 aa15.78■□□□□ 0.12
DFFB-209ENST00000477548 H2AFXP16104 143 aaPredicted RBP15.78■□□□□ 0.12
DFFB-209ENST00000477548 CCZ1BP86790 482 aa15.78■□□□□ 0.12
DFFB-209ENST00000477548 CCZ1P86791 482 aaPredicted RBP15.78■□□□□ 0.12
DFFB-209ENST00000477548 EIF4A2Q14240 407 aaKnown RBP15.78■□□□□ 0.12
DFFB-209ENST00000477548 TEX35Q5T0J7 233 aa15.78■□□□□ 0.12
DFFB-209ENST00000477548 RHPN1Q8TCX5 695 aa15.78■□□□□ 0.12
DFFB-209ENST00000477548 HDAC5Q9UQL6 1122 aa15.78■□□□□ 0.12
DFFB-209ENST00000477548 SNW1Q13573 536 aaKnown RBP15.78■□□□□ 0.12
DFFB-209ENST00000477548 TM6SF1Q9BZW5 370 aa15.78■□□□□ 0.12
DFFB-209ENST00000477548 FHOD1Q9Y613 1164 aa15.78■□□□□ 0.12
DFFB-209ENST00000477548 CLCN6P51797 869 aa15.77■□□□□ 0.12
DFFB-209ENST00000477548 IQCB1Q15051 598 aa15.77■□□□□ 0.12
DFFB-209ENST00000477548 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.77■□□□□ 0.12
DFFB-209ENST00000477548 C11orf57Q6ZUT1 292 aaPredicted RBP15.77■□□□□ 0.11
DFFB-209ENST00000477548 FEZ2Q9UHY8 353 aaPredicted RBP15.77■□□□□ 0.11
DFFB-209ENST00000477548 POLR3GO15318 223 aaPredicted RBP15.76■□□□□ 0.11
DFFB-209ENST00000477548 PNMA6AP0CW24 399 aaPredicted RBP15.76■□□□□ 0.11
DFFB-209ENST00000477548 RAD51AP2Q09MP3 1159 aa15.76■□□□□ 0.11
DFFB-209ENST00000477548 PGBD1Q96JS3 809 aa15.76■□□□□ 0.11
DFFB-209ENST00000477548 TTC21BQ7Z4L5 1316 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms