RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ITGBL1O95965 494 aaPredicted RBP8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 MYL6BP14649 208 aa8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 GPTP24298 496 aa8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 HLFQ16534 295 aa8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 NBPF10Q6P3W6 841 aaKnown RBP8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 GPC2Q8N158 579 aa8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 LARGE2Q8N3Y3 721 aa8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 NBPF15Q8N660 670 aa8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 C7orf43Q8WVR3 580 aa8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 BEGAINQ9BUH8 593 aa8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 NYXQ9GZU5 481 aa8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 RRP7AQ9Y3A4 280 aaKnown RBP8.88□□□□□ -0.99
RTFDC1-206ENST00000477485 ABCC12Q96J65 1359 aa8.87□□□□□ -0.99
RTFDC1-206ENST00000477485 NPC1L1Q9UHC9 1359 aa8.87□□□□□ -0.99
RTFDC1-206ENST00000477485 WDR33Q9C0J8 1336 aaKnown RBP8.87□□□□□ -0.99
RTFDC1-206ENST00000477485 MAP2K1Q02750 393 aaPredicted RBP8.87□□□□□ -0.99
RTFDC1-206ENST00000477485 CFAP44Q96MT7 982 aa8.87□□□□□ -0.99
RTFDC1-206ENST00000477485 TMX4Q9H1E5 349 aaPredicted RBP8.87□□□□□ -0.99
RTFDC1-206ENST00000477485 ZBTB3Q9H5J0 574 aa8.87□□□□□ -0.99
RTFDC1-206ENST00000477485 WBP1LQ9NX94 342 aa8.87□□□□□ -0.99
RTFDC1-206ENST00000477485 COL4A5P29400 1685 aa8.87□□□□□ -0.99
RTFDC1-206ENST00000477485 TAF1P21675 1872 aa8.87□□□□□ -0.99
RTFDC1-206ENST00000477485 RASSF10A6NK89 507 aa8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 FZD9O00144 591 aa8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 PPEF1O14829 653 aaPredicted RBP8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 HSPA8P11142 646 aaKnown RBP8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 FMR1Q06787 632 aaKnown RBP eCLIP8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 TAF7Q15545 349 aaPredicted RBP8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 NIM1KQ8IY84 436 aa8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 RBM17Q96I25 401 aaKnown RBP8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 PSMD1Q99460 953 aa8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 DDX21Q9NR30 783 aaKnown RBP eCLIP8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 THSD7BQ9C0I4 1608 aa8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 CASP8AP2Q9UKL3 1982 aa8.86□□□□□ -0.99
RTFDC1-206ENST00000477485 KLRG2A4D1S0 409 aaPredicted RBP8.85□□□□□ -0.99
RTFDC1-206ENST00000477485 CCDC85CA6NKD9 419 aa8.85□□□□□ -0.99
RTFDC1-206ENST00000477485 PPIP5K2O43314 1243 aa8.85□□□□□ -0.99
RTFDC1-206ENST00000477485 FAM161AQ3B820 660 aa8.85□□□□□ -0.99
RTFDC1-206ENST00000477485 CYP4F22Q6NT55 531 aa8.85□□□□□ -0.99
RTFDC1-206ENST00000477485 ABHD8Q96I13 439 aa8.85□□□□□ -0.99
RTFDC1-206ENST00000477485 CAPNS2Q96L46 248 aa8.85□□□□□ -0.99
RTFDC1-206ENST00000477485 TSKSQ9UJT2 592 aa8.85□□□□□ -0.99
RTFDC1-206ENST00000477485 MAP3K15Q6ZN16 1313 aa8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 TRAF5O00463 557 aa8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 PPP2R1AP30153 589 aa8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 EPS15P42566 896 aa8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 ECE1P42892 770 aa8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 AOC3Q16853 763 aa8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 CC2D2BQ6DHV5 1058 aa8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 TTLL7Q6ZT98 887 aa8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 SLC51AQ86UW1 340 aa8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 ZNF408Q9H9D4 720 aa8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 RNF216Q9NWF9 866 aaPredicted RBP8.84□□□□□ -0.99
RTFDC1-206ENST00000477485 POLR2AP24928 1970 aaKnown RBP8.83□□□□□ -1
RTFDC1-206ENST00000477485 HTATSF1O43719 755 aaKnown RBP8.83□□□□□ -1
RTFDC1-206ENST00000477485 SCNN1DP51172 638 aa8.83□□□□□ -1
RTFDC1-206ENST00000477485 CRY2Q49AN0 593 aa8.83□□□□□ -1
RTFDC1-206ENST00000477485 SUSD4Q5VX71 490 aa8.83□□□□□ -1
RTFDC1-206ENST00000477485 PPP1R42Q7Z4L9 355 aa8.83□□□□□ -1
RTFDC1-206ENST00000477485 PNISRQ8TF01 805 aaKnown RBP8.83□□□□□ -1
RTFDC1-206ENST00000477485 GPR101Q96P66 508 aaPredicted RBP8.83□□□□□ -1
RTFDC1-206ENST00000477485 THUMPD2Q9BTF0 503 aaKnown RBP8.83□□□□□ -1
RTFDC1-206ENST00000477485 UBN2Q6ZU65 1347 aa8.82□□□□□ -1
RTFDC1-206ENST00000477485 MAPK8IP3Q9UPT6 1336 aa8.82□□□□□ -1
RTFDC1-206ENST00000477485 AKAP11Q9UKA4 1901 aa8.82□□□□□ -1
RTFDC1-206ENST00000477485 RIC1Q4ADV7 1423 aa8.82□□□□□ -1
RTFDC1-206ENST00000477485 SNED1Q8TER0 1413 aa8.82□□□□□ -1
RTFDC1-206ENST00000477485 ERVV-1B6SEH8 477 aa8.82□□□□□ -1
RTFDC1-206ENST00000477485 RGL2O15211 777 aa8.82□□□□□ -1
RTFDC1-206ENST00000477485 AOC2O75106 756 aa8.82□□□□□ -1
RTFDC1-206ENST00000477485 USP50Q70EL3 339 aaPredicted RBP8.82□□□□□ -1
RTFDC1-206ENST00000477485 NLRP3Q96P20 1036 aa8.82□□□□□ -1
RTFDC1-206ENST00000477485 BCL2L13Q9BXK5 485 aa8.82□□□□□ -1
RTFDC1-206ENST00000477485 DDX60Q8IY21 1712 aaKnown RBP8.81□□□□□ -1
RTFDC1-206ENST00000477485 CELF2O95319 508 aaKnown RBP8.81□□□□□ -1
RTFDC1-206ENST00000477485 NTSR2O95665 410 aa8.81□□□□□ -1
RTFDC1-206ENST00000477485 EIF2S2P20042 333 aaKnown RBP8.81□□□□□ -1
RTFDC1-206ENST00000477485 GRIPAP1Q4V328 841 aa8.81□□□□□ -1
RTFDC1-206ENST00000477485 DPP8Q6V1X1 898 aaPredicted RBP8.81□□□□□ -1
RTFDC1-206ENST00000477485 C3orf67Q6ZVT6 689 aa8.81□□□□□ -1
RTFDC1-206ENST00000477485 NECTIN2Q92692 538 aa8.81□□□□□ -1
RTFDC1-206ENST00000477485 ZNF428Q96B54 188 aa8.81□□□□□ -1
RTFDC1-206ENST00000477485 CRAMP1Q96RY5 1269 aa8.81□□□□□ -1
RTFDC1-206ENST00000477485 ADARB2Q9NS39 739 aaKnown RBP8.81□□□□□ -1
RTFDC1-206ENST00000477485 IBTKQ9P2D0 1353 aaPredicted RBP8.81□□□□□ -1
RTFDC1-206ENST00000477485 RAD17O75943 681 aa8.8□□□□□ -1
RTFDC1-206ENST00000477485 HOXA10P31260 410 aaPredicted RBP8.8□□□□□ -1
RTFDC1-206ENST00000477485 GMPSP49915 693 aaPredicted RBP8.8□□□□□ -1
RTFDC1-206ENST00000477485 EIF4A1P60842 406 aaKnown RBP8.8□□□□□ -1
RTFDC1-206ENST00000477485 MLLT1Q03111 559 aaPredicted RBP8.8□□□□□ -1
RTFDC1-206ENST00000477485 AIMP1Q12904 312 aaKnown RBP8.8□□□□□ -1
RTFDC1-206ENST00000477485 GIGYF2Q6Y7W6 1299 aaKnown RBP8.8□□□□□ -1
RTFDC1-206ENST00000477485 SUPT20HQ8NEM7 779 aa8.8□□□□□ -1
RTFDC1-206ENST00000477485 UTP14AQ9BVJ6 771 aaKnown RBP8.8□□□□□ -1
RTFDC1-206ENST00000477485 GLIS2Q9BZE0 524 aaPredicted RBP8.8□□□□□ -1
RTFDC1-206ENST00000477485 GPRC5DQ9NZD1 345 aa8.8□□□□□ -1
RTFDC1-206ENST00000477485 TSPYL4Q9UJ04 414 aa8.8□□□□□ -1
RTFDC1-206ENST00000477485 TLL2Q9Y6L7 1015 aa8.8□□□□□ -1
RTFDC1-206ENST00000477485 ABCC4O15439 1325 aa8.8□□□□□ -1
RTFDC1-206ENST00000477485 ANXA1P04083 346 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms