RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 FKBP5Q13451 457 aaPredicted RBP7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 IER5Q5VY09 327 aa7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 CLP1Q92989 425 aaKnown RBP7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 PRIMPOLQ96LW4 560 aa7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 CEP63Q96MT8 703 aa7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 QTRT2Q9H974 415 aaKnown RBP7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 STRN4Q9NRL3 753 aa7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 TIMELESSQ9UNS1 1208 aa7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 KCNQ4P56696 695 aa7.3□□□□□ -1.24
PDZRN3-206ENST00000477434 TYRO3Q06418 890 aa7.3□□□□□ -1.24
PDZRN3-206ENST00000477434 CYB5RLQ6IPT4 315 aa7.3□□□□□ -1.24
PDZRN3-206ENST00000477434 SLCO4C1Q6ZQN7 724 aa7.3□□□□□ -1.24
PDZRN3-206ENST00000477434 BTLAQ7Z6A9 289 aa7.3□□□□□ -1.24
PDZRN3-206ENST00000477434 MYO19Q96H55 970 aa7.3□□□□□ -1.24
PDZRN3-206ENST00000477434 BRD7Q9NPI1 651 aa7.3□□□□□ -1.24
PDZRN3-206ENST00000477434 CXXC1Q9P0U4 656 aaPredicted RBP7.3□□□□□ -1.24
PDZRN3-206ENST00000477434 TGFBR3LH3BV60 316 aa7.29□□□□□ -1.24
PDZRN3-206ENST00000477434 SFSWAPQ12872 951 aaKnown RBP7.29□□□□□ -1.24
PDZRN3-206ENST00000477434 ZNF468Q5VIY5 522 aaPredicted RBP7.29□□□□□ -1.24
PDZRN3-206ENST00000477434 COL26A1Q96A83 441 aa7.29□□□□□ -1.24
PDZRN3-206ENST00000477434 GGA1Q9UJY5 639 aa7.29□□□□□ -1.24
PDZRN3-206ENST00000477434 ADH6P28332 368 aa7.28□□□□□ -1.24
PDZRN3-206ENST00000477434 GALNT6Q8NCL4 622 aa7.28□□□□□ -1.24
PDZRN3-206ENST00000477434 NEDD1Q8NHV4 660 aa7.28□□□□□ -1.24
PDZRN3-206ENST00000477434 EDARADDQ8WWZ3 215 aa7.28□□□□□ -1.24
PDZRN3-206ENST00000477434 PRR12Q9ULL5 1215 aa7.28□□□□□ -1.24
PDZRN3-206ENST00000477434 BCS1LQ9Y276 419 aa7.28□□□□□ -1.24
PDZRN3-206ENST00000477434 ZNF608Q9ULD9 1512 aaPredicted RBP7.27□□□□□ -1.25
PDZRN3-206ENST00000477434 NEURL1BA8MQ27 555 aa7.27□□□□□ -1.25
PDZRN3-206ENST00000477434 MARSP56192 900 aaKnown RBP7.27□□□□□ -1.25
PDZRN3-206ENST00000477434 DGKZQ13574 1117 aa7.27□□□□□ -1.25
PDZRN3-206ENST00000477434 C11orf91Q3C1V1 193 aa7.27□□□□□ -1.25
PDZRN3-206ENST00000477434 C1orf229Q6ZS94 237 aaPredicted RBP7.27□□□□□ -1.25
PDZRN3-206ENST00000477434 KLK14Q9P0G3 267 aa7.27□□□□□ -1.25
PDZRN3-206ENST00000477434 DMGDHQ9UI17 866 aaKnown RBP7.27□□□□□ -1.25
PDZRN3-206ENST00000477434 KCNH4Q9UQ05 1017 aa7.27□□□□□ -1.25
PDZRN3-206ENST00000477434 DNMT3AQ9Y6K1 912 aaPredicted RBP7.27□□□□□ -1.25
PDZRN3-206ENST00000477434 RNF225M0QZC1 329 aaPredicted RBP7.26□□□□□ -1.25
PDZRN3-206ENST00000477434 SUPT5HO00267 1087 aaKnown RBP7.26□□□□□ -1.25
PDZRN3-206ENST00000477434 PTCD1O75127 700 aaKnown RBP7.26□□□□□ -1.25
PDZRN3-206ENST00000477434 EPXP11678 715 aa7.26□□□□□ -1.25
PDZRN3-206ENST00000477434 KLF15Q9UIH9 416 aa7.26□□□□□ -1.25
PDZRN3-206ENST00000477434 LRFN2Q9ULH4 789 aa7.26□□□□□ -1.25
PDZRN3-206ENST00000477434 LMTK3Q96Q04 1460 aa7.25□□□□□ -1.25
PDZRN3-206ENST00000477434 SHISA8B8ZZ34 492 aa7.25□□□□□ -1.25
PDZRN3-206ENST00000477434 ATP2B4P23634 1241 aa7.25□□□□□ -1.25
PDZRN3-206ENST00000477434 SPEM2Q0P670 501 aa7.25□□□□□ -1.25
PDZRN3-206ENST00000477434 NEUROD1Q13562 356 aa7.25□□□□□ -1.25
PDZRN3-206ENST00000477434 GRIN2CQ14957 1233 aa7.25□□□□□ -1.25
PDZRN3-206ENST00000477434 COX20Q5RI15 118 aa7.25□□□□□ -1.25
PDZRN3-206ENST00000477434 SCARF2Q96GP6 870 aaPredicted RBP7.25□□□□□ -1.25
PDZRN3-206ENST00000477434 SLAIN2Q9P270 581 aa7.25□□□□□ -1.25
PDZRN3-206ENST00000477434 CCDC88BA6NC98 1476 aa7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 TMEM88BA6NKF7 163 aa7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 SIN3BO75182 1162 aa7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 EPB42P16452 691 aa7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 INPP5BP32019 993 aa7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 PCBP4P57723 403 aaKnown RBP7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 C16orf46Q6P387 395 aa7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 SYT9Q86SS6 491 aa7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 FCHSD1Q86WN1 690 aa7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 SLC30A3Q99726 388 aa7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 EFCC1Q9HA90 598 aa7.24□□□□□ -1.25
PDZRN3-206ENST00000477434 MICAL2O94851 1124 aa7.23□□□□□ -1.25
PDZRN3-206ENST00000477434 IDH3AP50213 366 aa7.23□□□□□ -1.25
PDZRN3-206ENST00000477434 ARSDP51689 593 aa7.23□□□□□ -1.25
PDZRN3-206ENST00000477434 KCNMA1Q12791 1236 aa7.23□□□□□ -1.25
PDZRN3-206ENST00000477434 IFT43Q96FT9 208 aa7.23□□□□□ -1.25
PDZRN3-206ENST00000477434 MKNK1Q9BUB5 465 aa7.23□□□□□ -1.25
PDZRN3-206ENST00000477434 PRDM2Q13029 1718 aa7.22□□□□□ -1.25
PDZRN3-206ENST00000477434 AMPD1P23109 780 aa7.22□□□□□ -1.25
PDZRN3-206ENST00000477434 PODNQ7Z5L7 613 aa7.22□□□□□ -1.25
PDZRN3-206ENST00000477434 BEND7Q8N7W2 519 aaPredicted RBP7.22□□□□□ -1.25
PDZRN3-206ENST00000477434 TNFRSF25Q93038 417 aa7.22□□□□□ -1.25
PDZRN3-206ENST00000477434 SAP130Q9H0E3 1048 aa7.22□□□□□ -1.25
PDZRN3-206ENST00000477434 C11orf16Q9NQ32 467 aa7.22□□□□□ -1.25
PDZRN3-206ENST00000477434 ELOA3CA0A087WX78 387 aaPredicted RBP7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 ELOA3DA6NLF2 546 aaPredicted RBP7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 PHF20L1A8MW92 1017 aa7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 BRD2P25440 801 aaKnown RBP7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 ELOA3BQ3SY89 546 aa7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 CAPN12Q6ZSI9 719 aa7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 ELOA3Q8NG57 546 aa7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 BTBD6Q96KE9 485 aa7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 MDFIQ99750 246 aa7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 ARID3AQ99856 593 aa7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 GSX2Q9BZM3 304 aa7.21□□□□□ -1.26
PDZRN3-206ENST00000477434 EIF4G3O43432 1585 aaKnown RBP7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 ARAP1Q96P48 1450 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 ADARB2-AS1A8MUL3 147 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 ALAS2P22557 587 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 SSFA2P28290 1259 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 GRNP28799 593 aaKnown RBP7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 GSK3AP49840 483 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 CCINQ13939 588 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 NAA30Q147X3 362 aaPredicted RBP7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 KANK3Q6NY19 840 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 CHSY3Q70JA7 882 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 RAB44Q7Z6P3 723 aaPredicted RBP7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 TREML1Q86YW5 311 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms