RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 RGL2O15211 777 aa16.04■□□□□ 0.16
APTX-220ENST00000476858 TCIRG1Q13488 830 aa16.04■□□□□ 0.16
APTX-220ENST00000476858 NLRP10Q86W26 655 aa16.04■□□□□ 0.16
APTX-220ENST00000476858 BRIP1Q9BX63 1249 aa16.04■□□□□ 0.16
APTX-220ENST00000476858 MYH16Q9H6N6 1097 aa16.04■□□□□ 0.16
APTX-220ENST00000476858 TRMT2AQ8IZ69 625 aaKnown RBP16.03■□□□□ 0.16
APTX-220ENST00000476858 JARID2Q92833 1246 aaPredicted RBP16.03■□□□□ 0.16
APTX-220ENST00000476858 ISCA1Q9BUE6 129 aa16.03■□□□□ 0.16
APTX-220ENST00000476858 MYD88Q99836 296 aa16.02■□□□□ 0.16
APTX-220ENST00000476858 COL4A1P02462 1669 aa16.02■□□□□ 0.15
APTX-220ENST00000476858 NPHP1O15259 732 aa16.01■□□□□ 0.15
APTX-220ENST00000476858 ST5P78524 1137 aa16.01■□□□□ 0.15
APTX-220ENST00000476858 HNRNPUQ00839 825 aaKnown RBP eCLIP16.01■□□□□ 0.15
APTX-220ENST00000476858 RTL5Q5HYW3 569 aaPredicted RBP16.01■□□□□ 0.15
APTX-220ENST00000476858 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
APTX-220ENST00000476858 TPTE2Q6XPS3 522 aa16.01■□□□□ 0.15
APTX-220ENST00000476858 RIC3Q7Z5B4 369 aa16.01■□□□□ 0.15
APTX-220ENST00000476858 PIM2Q9P1W9 311 aa16.01■□□□□ 0.15
APTX-220ENST00000476858 MAP3K2Q9Y2U5 619 aa16.01■□□□□ 0.15
APTX-220ENST00000476858 CACNA1SQ13698 1873 aa16■□□□□ 0.15
APTX-220ENST00000476858 KLRG2A4D1S0 409 aaPredicted RBP16■□□□□ 0.15
APTX-220ENST00000476858 PI4KAP2A4QPH2 592 aa16■□□□□ 0.15
APTX-220ENST00000476858 E9PSI1 815 aa16■□□□□ 0.15
APTX-220ENST00000476858 H0YIN7 160 aa16■□□□□ 0.15
APTX-220ENST00000476858 SRGNP10124 158 aa16■□□□□ 0.15
APTX-220ENST00000476858 HCLS1P14317 486 aaPredicted RBP16■□□□□ 0.15
APTX-220ENST00000476858 PRELPP51888 382 aa16■□□□□ 0.15
APTX-220ENST00000476858 PI4KAP1Q8N8J0 262 aa16■□□□□ 0.15
APTX-220ENST00000476858 ZNF622Q969S3 477 aaKnown RBP eCLIP16■□□□□ 0.15
APTX-220ENST00000476858 SLX4Q8IY92 1834 aa16■□□□□ 0.15
APTX-220ENST00000476858 F6X3S4 739 aa15.99■□□□□ 0.15
APTX-220ENST00000476858 IGKV5-2P06315 115 aa15.99■□□□□ 0.15
APTX-220ENST00000476858 PDE6BP35913 854 aa15.99■□□□□ 0.15
APTX-220ENST00000476858 FLIIQ13045 1269 aa15.99■□□□□ 0.15
APTX-220ENST00000476858 DALRD3Q5D0E6 543 aaKnown RBP15.99■□□□□ 0.15
APTX-220ENST00000476858 UTP14AQ9BVJ6 771 aaKnown RBP15.99■□□□□ 0.15
APTX-220ENST00000476858 STK31Q9BXU1 1019 aa15.99■□□□□ 0.15
APTX-220ENST00000476858 LAMB2P55268 1798 aa15.99■□□□□ 0.15
APTX-220ENST00000476858 DDX60Q8IY21 1712 aaKnown RBP15.99■□□□□ 0.15
APTX-220ENST00000476858 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
APTX-220ENST00000476858 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
APTX-220ENST00000476858 CWF19L2Q2TBE0 894 aaKnown RBP15.98■□□□□ 0.15
APTX-220ENST00000476858 PARP10Q53GL7 1025 aa15.98■□□□□ 0.15
APTX-220ENST00000476858 FAM89AQ96GI7 184 aa15.98■□□□□ 0.15
APTX-220ENST00000476858 METTL22Q9BUU2 404 aaPredicted RBP15.98■□□□□ 0.15
APTX-220ENST00000476858 BCL2L13Q9BXK5 485 aa15.98■□□□□ 0.15
APTX-220ENST00000476858 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
APTX-220ENST00000476858 RASSF7Q02833 373 aa15.97■□□□□ 0.15
APTX-220ENST00000476858 KSR2Q6VAB6 950 aa15.97■□□□□ 0.15
APTX-220ENST00000476858 ARHGAP27Q6ZUM4 889 aa15.97■□□□□ 0.15
APTX-220ENST00000476858 TTLL6Q8N841 843 aa15.97■□□□□ 0.15
APTX-220ENST00000476858 SSH1Q8WYL5 1049 aa15.97■□□□□ 0.15
APTX-220ENST00000476858 NYXQ9GZU5 481 aa15.97■□□□□ 0.15
APTX-220ENST00000476858 TRMT112Q9UI30 125 aaKnown RBP15.97■□□□□ 0.15
APTX-220ENST00000476858 C21orf2O43822 256 aa15.96■□□□□ 0.15
APTX-220ENST00000476858 YY1P25490 414 aa15.96■□□□□ 0.15
APTX-220ENST00000476858 CRY2Q49AN0 593 aa15.96■□□□□ 0.15
APTX-220ENST00000476858 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
APTX-220ENST00000476858 PRPF40BQ6NWY9 871 aaKnown RBP15.96■□□□□ 0.15
APTX-220ENST00000476858 PPP1R42Q7Z4L9 355 aa15.96■□□□□ 0.15
APTX-220ENST00000476858 MRPL50Q8N5N7 158 aaKnown RBP15.96■□□□□ 0.15
APTX-220ENST00000476858 RIC1Q4ADV7 1423 aa15.95■□□□□ 0.14
APTX-220ENST00000476858 GRIN3BO60391 1043 aa15.95■□□□□ 0.14
APTX-220ENST00000476858 SLC10A5Q5PT55 438 aa15.95■□□□□ 0.14
APTX-220ENST00000476858 STYK1Q6J9G0 422 aa15.95■□□□□ 0.14
APTX-220ENST00000476858 MASTLQ96GX5 879 aa15.95■□□□□ 0.14
APTX-220ENST00000476858 TAF1P21675 1872 aa15.95■□□□□ 0.14
APTX-220ENST00000476858 NFKBIEO00221 500 aa15.94■□□□□ 0.14
APTX-220ENST00000476858 NPR1P16066 1061 aa15.94■□□□□ 0.14
APTX-220ENST00000476858 TRIM28Q13263 835 aaKnown RBP15.94■□□□□ 0.14
APTX-220ENST00000476858 FKBP5Q13451 457 aaPredicted RBP15.94■□□□□ 0.14
APTX-220ENST00000476858 C7orf43Q8WVR3 580 aa15.94■□□□□ 0.14
APTX-220ENST00000476858 CHD4Q14839 1912 aa15.94■□□□□ 0.14
APTX-220ENST00000476858 SH3TC1Q8TE82 1336 aa15.93■□□□□ 0.14
APTX-220ENST00000476858 NEURL1BA8MQ27 555 aa15.92■□□□□ 0.14
APTX-220ENST00000476858 DDX58O95786 925 aaKnown RBP15.92■□□□□ 0.14
APTX-220ENST00000476858 DNAAF4Q8WXU2 420 aa15.91■□□□□ 0.14
APTX-220ENST00000476858 CWC25Q9NXE8 425 aaPredicted RBP15.91■□□□□ 0.14
APTX-220ENST00000476858 SNED1Q8TER0 1413 aa15.91■□□□□ 0.14
APTX-220ENST00000476858 ABCC4O15439 1325 aa15.91■□□□□ 0.14
APTX-220ENST00000476858 IRS4O14654 1257 aaPredicted RBP15.9■□□□□ 0.14
APTX-220ENST00000476858 HOXA10P31260 410 aaPredicted RBP15.9■□□□□ 0.14
APTX-220ENST00000476858 BEND3Q5T5X7 828 aa15.9■□□□□ 0.14
APTX-220ENST00000476858 ZBTB38Q8NAP3 1195 aaPredicted RBP15.9■□□□□ 0.14
APTX-220ENST00000476858 CCDC191Q8NCU4 936 aa15.9■□□□□ 0.14
APTX-220ENST00000476858 CNKSR1Q969H4 720 aa15.9■□□□□ 0.14
APTX-220ENST00000476858 CCDC85AQ96PX6 553 aaPredicted RBP15.9■□□□□ 0.14
APTX-220ENST00000476858 TNNQ9UQP3 1299 aa15.9■□□□□ 0.14
APTX-220ENST00000476858 SBF1O95248 1867 aa15.89■□□□□ 0.13
APTX-220ENST00000476858 FER1L6Q2WGJ9 1857 aa15.89■□□□□ 0.13
APTX-220ENST00000476858 PCCAP05165 728 aaPredicted RBP15.89■□□□□ 0.13
APTX-220ENST00000476858 CASP7P55210 303 aa15.89■□□□□ 0.13
APTX-220ENST00000476858 C9orf131Q5VYM1 1079 aa15.89■□□□□ 0.13
APTX-220ENST00000476858 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
APTX-220ENST00000476858 NLRP3Q96P20 1036 aa15.89■□□□□ 0.13
APTX-220ENST00000476858 PDZRN3Q9UPQ7 1066 aa15.89■□□□□ 0.13
APTX-220ENST00000476858 CACNA1FO60840 1977 aa15.88■□□□□ 0.13
APTX-220ENST00000476858 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
APTX-220ENST00000476858 GCKRQ14397 625 aa15.88■□□□□ 0.13
APTX-220ENST00000476858 ZNF784Q8NCA9 323 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms