RNA–Protein interactions for RNA: ENST00000476652.2

CEP78-208, Transcript of centrosomal protein 78, human

TSL 3

Gene CEP78, Length 634 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEP78-208	ENST00000476652	HOXA10	P31260	410 aa	Predicted RBP	27.73	■■■□□ 2.03
CEP78-208	ENST00000476652	SYNE4	Q8N205	404 aa		27.73	■■■□□ 2.03
CEP78-208	ENST00000476652	TRIM35	Q9UPQ4	493 aa		27.73	■■■□□ 2.03
CEP78-208	ENST00000476652	ZNF541	Q9H0D2	1346 aa		27.72	■■■□□ 2.03
CEP78-208	ENST00000476652	IARS	P41252	1262 aa	Known RBP	27.72	■■■□□ 2.03
CEP78-208	ENST00000476652	PARP10	Q53GL7	1025 aa		27.72	■■■□□ 2.03
CEP78-208	ENST00000476652	PPP1R42	Q7Z4L9	355 aa		27.72	■■■□□ 2.03
CEP78-208	ENST00000476652	JMY	Q8N9B5	988 aa		27.72	■■■□□ 2.03
CEP78-208	ENST00000476652	CHL1	O00533	1208 aa		27.71	■■■□□ 2.03
CEP78-208	ENST00000476652	POTEI	P0CG38	1075 aa		27.71	■■■□□ 2.03
CEP78-208	ENST00000476652	POTEJ	P0CG39	1038 aa		27.71	■■■□□ 2.03
CEP78-208	ENST00000476652	KRT24	Q2M2I5	525 aa		27.71	■■■□□ 2.03
CEP78-208	ENST00000476652	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.71	■■■□□ 2.03
CEP78-208	ENST00000476652	ADAMTS8	Q9UP79	889 aa		27.71	■■■□□ 2.03
CEP78-208	ENST00000476652	PCNT	O95613	3336 aa		27.7	■■■□□ 2.03
CEP78-208	ENST00000476652	CHADL	Q6NUI6	762 aa		27.7	■■■□□ 2.02
CEP78-208	ENST00000476652	C3orf67	Q6ZVT6	689 aa		27.7	■■■□□ 2.02
CEP78-208	ENST00000476652	PSMD1	Q99460	953 aa		27.7	■■■□□ 2.02
CEP78-208	ENST00000476652	LAS1L	Q9Y4W2	734 aa	Known RBP	27.7	■■■□□ 2.02
CEP78-208	ENST00000476652	COL4A5	P29400	1685 aa		27.69	■■■□□ 2.02
CEP78-208	ENST00000476652	IQCA1L	A6NCM1	817 aa		27.69	■■■□□ 2.02
CEP78-208	ENST00000476652	CC2D2B	Q6DHV5	1058 aa		27.69	■■■□□ 2.02
CEP78-208	ENST00000476652	COPS6	Q7L5N1	327 aa		27.69	■■■□□ 2.02
CEP78-208	ENST00000476652	RBM17	Q96I25	401 aa	Known RBP	27.69	■■■□□ 2.02
CEP78-208	ENST00000476652	TAF1	P21675	1872 aa		27.68	■■■□□ 2.02
CEP78-208	ENST00000476652	AIMP1	Q12904	312 aa	Known RBP	27.68	■■■□□ 2.02
CEP78-208	ENST00000476652	XAGE3	Q8WTP9	111 aa		27.68	■■■□□ 2.02
CEP78-208	ENST00000476652	CRAMP1	Q96RY5	1269 aa		27.68	■■■□□ 2.02
CEP78-208	ENST00000476652	UTP14A	Q9BVJ6	771 aa	Known RBP	27.68	■■■□□ 2.02
CEP78-208	ENST00000476652	PRKRIP1	Q9H875	184 aa	Predicted RBP	27.68	■■■□□ 2.02
CEP78-208	ENST00000476652	ADAMTSL1	Q8N6G6	1762 aa		27.68	■■■□□ 2.02
CEP78-208	ENST00000476652	SLC51A	Q86UW1	340 aa		27.67	■■■□□ 2.02
CEP78-208	ENST00000476652	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.67	■■■□□ 2.02
CEP78-208	ENST00000476652	DDX21	Q9NR30	783 aa	Known RBP eCLIP	27.67	■■■□□ 2.02
CEP78-208	ENST00000476652	FZD9	O00144	591 aa		27.66	■■■□□ 2.02
CEP78-208	ENST00000476652	NLRP3	Q96P20	1036 aa		27.66	■■■□□ 2.02
CEP78-208	ENST00000476652	DDX60	Q8IY21	1712 aa	Known RBP	27.65	■■■□□ 2.02
CEP78-208	ENST00000476652	PPEF1	O14829	653 aa	Predicted RBP	27.65	■■■□□ 2.02
CEP78-208	ENST00000476652	HSP90AB3P	Q58FF7	597 aa		27.65	■■■□□ 2.02
CEP78-208	ENST00000476652	SLC10A5	Q5PT55	438 aa		27.65	■■■□□ 2.02
CEP78-208	ENST00000476652	TCERG1	O14776	1098 aa	Known RBP	27.64	■■■□□ 2.02
CEP78-208	ENST00000476652	CHPF2	Q9P2E5	772 aa		27.64	■■■□□ 2.02
CEP78-208	ENST00000476652	RNF123	Q5XPI4	1314 aa		27.64	■■■□□ 2.01
CEP78-208	ENST00000476652	NLRP10	Q86W26	655 aa		27.63	■■■□□ 2.01
CEP78-208	ENST00000476652	LDHD	Q86WU2	507 aa		27.63	■■■□□ 2.01
CEP78-208	ENST00000476652	JDP2	Q8WYK2	163 aa		27.63	■■■□□ 2.01
CEP78-208	ENST00000476652	GRIPAP1	Q4V328	841 aa		27.62	■■■□□ 2.01
CEP78-208	ENST00000476652	HACL1	Q9UJ83	578 aa		27.62	■■■□□ 2.01
CEP78-208	ENST00000476652	LTBP1	Q14766	1721 aa		27.61	■■■□□ 2.01
CEP78-208	ENST00000476652	TCIRG1	Q13488	830 aa		27.61	■■■□□ 2.01
CEP78-208	ENST00000476652	HDGFL1	Q5TGJ6	251 aa		27.61	■■■□□ 2.01
CEP78-208	ENST00000476652	GPC2	Q8N158	579 aa		27.61	■■■□□ 2.01
CEP78-208	ENST00000476652	HOXB7	P09629	217 aa		27.6	■■■□□ 2.01
CEP78-208	ENST00000476652	CFAP44	Q96MT7	982 aa		27.6	■■■□□ 2.01
CEP78-208	ENST00000476652	ABCC4	O15439	1325 aa		27.6	■■■□□ 2.01
CEP78-208	ENST00000476652	EPHX2	P34913	555 aa		27.59	■■■□□ 2.01
CEP78-208	ENST00000476652	EAPP	Q56P03	285 aa	Predicted RBP	27.59	■■■□□ 2.01
CEP78-208	ENST00000476652	HCLS1	P14317	486 aa	Predicted RBP	27.58	■■■□□ 2.01
CEP78-208	ENST00000476652	LARGE2	Q8N3Y3	721 aa		27.58	■■■□□ 2.01
CEP78-208	ENST00000476652	CREBZF	Q9NS37	354 aa		27.58	■■■□□ 2.01
CEP78-208	ENST00000476652	TRMT112	Q9UI30	125 aa	Known RBP	27.58	■■■□□ 2.01
CEP78-208	ENST00000476652	ATP6V0A2	Q9Y487	856 aa		27.58	■■■□□ 2.01
CEP78-208	ENST00000476652	PASK	Q96RG2	1323 aa		27.58	■■■□□ 2.01
CEP78-208	ENST00000476652	EIF6	P56537	245 aa	Known RBP	27.57	■■■□□ 2
CEP78-208	ENST00000476652	MBIP	Q9NS73	344 aa		27.57	■■■□□ 2
CEP78-208	ENST00000476652	SH3TC1	Q8TE82	1336 aa		27.57	■■■□□ 2
CEP78-208	ENST00000476652	LRRC37A	A6NMS7	1700 aa		27.56	■■■□□ 2
CEP78-208	ENST00000476652	PLBD2	Q8NHP8	589 aa		27.56	■■■□□ 2
CEP78-208	ENST00000476652	DBF4	Q9UBU7	674 aa	Predicted RBP	27.56	■■■□□ 2
CEP78-208	ENST00000476652	GJA3	Q9Y6H8	435 aa		27.56	■■■□□ 2
CEP78-208	ENST00000476652	APAF1	O14727	1248 aa		27.55	■■■□□ 2
CEP78-208	ENST00000476652	DUSP27	Q5VZP5	1158 aa		27.55	■■■□□ 2
CEP78-208	ENST00000476652	ZNF428	Q96B54	188 aa		27.55	■■■□□ 2
CEP78-208	ENST00000476652	TMX4	Q9H1E5	349 aa	Predicted RBP	27.55	■■■□□ 2
CEP78-208	ENST00000476652	ANKRD13D	Q6ZTN6	518 aa		27.54	■■■□□ 2
CEP78-208	ENST00000476652	PNMA8A	Q86V59	439 aa	Predicted RBP	27.54	■■■□□ 2
CEP78-208	ENST00000476652	CLEC11A	Q9Y240	323 aa		27.54	■■■□□ 2
CEP78-208	ENST00000476652	PPIP5K2	O43314	1243 aa		27.53	■■■□□ 2
CEP78-208	ENST00000476652	ITGBL1	O95965	494 aa	Predicted RBP	27.53	■■■□□ 2
CEP78-208	ENST00000476652	ZNF853	P0CG23	659 aa		27.53	■■■□□ 2
CEP78-208	ENST00000476652	BBOX1	O75936	387 aa		27.52	■■■□□ 2
CEP78-208	ENST00000476652	AOC3	Q16853	763 aa		27.52	■■■□□ 2
CEP78-208	ENST00000476652	NIM1K	Q8IY84	436 aa		27.52	■■■□□ 2
CEP78-208	ENST00000476652	HYPK	Q9NX55	129 aa		27.52	■■■□□ 2
CEP78-208	ENST00000476652	MKRN1	Q9UHC7	482 aa	Known RBP	27.52	■■■□□ 2
CEP78-208	ENST00000476652	DDX46	Q7L014	1031 aa	Known RBP	27.51	■■□□□ 1.99
CEP78-208	ENST00000476652	ISCA1	Q9BUE6	129 aa		27.51	■■□□□ 1.99
CEP78-208	ENST00000476652	HSPA1A	P0DMV8	641 aa	Known RBP	27.5	■■□□□ 1.99
CEP78-208	ENST00000476652	HSPA1B	P0DMV9	641 aa	Known RBP	27.5	■■□□□ 1.99
CEP78-208	ENST00000476652	SCNN1D	P51172	638 aa		27.5	■■□□□ 1.99
CEP78-208	ENST00000476652	SP8	Q8IXZ3	490 aa		27.5	■■□□□ 1.99
CEP78-208	ENST00000476652	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.5	■■□□□ 1.99
CEP78-208	ENST00000476652	IFT57	Q9NWB7	429 aa		27.5	■■□□□ 1.99
CEP78-208	ENST00000476652	TRPM7	Q96QT4	1865 aa		27.49	■■□□□ 1.99
CEP78-208	ENST00000476652	DUOX1	Q9NRD9	1551 aa		27.49	■■□□□ 1.99
CEP78-208	ENST00000476652	ATP5J2-PTCD1	G3V325	749 aa		27.49	■■□□□ 1.99
CEP78-208	ENST00000476652	LMOD1	P29536	600 aa	Predicted RBP	27.49	■■□□□ 1.99
CEP78-208	ENST00000476652	GRAP	Q13588	217 aa		27.49	■■□□□ 1.99
CEP78-208	ENST00000476652	COL13A1	Q5TAT6	717 aa	Predicted RBP	27.49	■■□□□ 1.99
CEP78-208	ENST00000476652	MAP1S	Q66K74	1059 aa	Predicted RBP	27.49	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms