RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TRAF5O00463 557 aa15.96■□□□□ 0.15
HDAC6-219ENST00000476625 HSPA8P11142 646 aaKnown RBP15.96■□□□□ 0.15
HDAC6-219ENST00000476625 EPS15P42566 896 aa15.96■□□□□ 0.15
HDAC6-219ENST00000476625 GRM1Q13255 1194 aa15.96■□□□□ 0.15
HDAC6-219ENST00000476625 TAF7Q15545 349 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-219ENST00000476625 SUSD4Q5VX71 490 aa15.96■□□□□ 0.15
HDAC6-219ENST00000476625 RTKN2Q8IZC4 609 aa15.96■□□□□ 0.15
HDAC6-219ENST00000476625 ZNF428Q96B54 188 aa15.96■□□□□ 0.15
HDAC6-219ENST00000476625 WBP1LQ9NX94 342 aa15.96■□□□□ 0.15
HDAC6-219ENST00000476625 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
HDAC6-219ENST00000476625 CTCFP49711 727 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-219ENST00000476625 SCNN1DP51172 638 aa15.95■□□□□ 0.14
HDAC6-219ENST00000476625 CRY2Q49AN0 593 aa15.95■□□□□ 0.14
HDAC6-219ENST00000476625 GPC2Q8N158 579 aa15.95■□□□□ 0.14
HDAC6-219ENST00000476625 AIDAQ96BJ3 306 aa15.95■□□□□ 0.14
HDAC6-219ENST00000476625 ABT1Q9ULW3 272 aaKnown RBP15.95■□□□□ 0.14
HDAC6-219ENST00000476625 NUDCQ9Y266 331 aa15.95■□□□□ 0.14
HDAC6-219ENST00000476625 WDR33Q9C0J8 1336 aaKnown RBP15.94■□□□□ 0.14
HDAC6-219ENST00000476625 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
HDAC6-219ENST00000476625 RASSF10A6NK89 507 aa15.94■□□□□ 0.14
HDAC6-219ENST00000476625 ANXA1P04083 346 aa15.94■□□□□ 0.14
HDAC6-219ENST00000476625 DEFB115Q30KQ5 88 aa15.94■□□□□ 0.14
HDAC6-219ENST00000476625 PRDM10Q9NQV6 1147 aa15.94■□□□□ 0.14
HDAC6-219ENST00000476625 TSKSQ9UJT2 592 aa15.94■□□□□ 0.14
HDAC6-219ENST00000476625 COL4A1P02462 1669 aa15.94■□□□□ 0.14
HDAC6-219ENST00000476625 PPEF1O14829 653 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-219ENST00000476625 ALDH1B1P30837 517 aa15.93■□□□□ 0.14
HDAC6-219ENST00000476625 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
HDAC6-219ENST00000476625 CYP4F22Q6NT55 531 aa15.93■□□□□ 0.14
HDAC6-219ENST00000476625 RPGRQ92834 1020 aaKnown RBP15.93■□□□□ 0.14
HDAC6-219ENST00000476625 PSMD1Q99460 953 aa15.93■□□□□ 0.14
HDAC6-219ENST00000476625 DDX21Q9NR30 783 aaKnown RBP eCLIP15.93■□□□□ 0.14
HDAC6-219ENST00000476625 NTSR2O95665 410 aa15.92■□□□□ 0.14
HDAC6-219ENST00000476625 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-219ENST00000476625 PNMA8AQ86V59 439 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-219ENST00000476625 LARGE2Q8N3Y3 721 aa15.92■□□□□ 0.14
HDAC6-219ENST00000476625 EIF6P56537 245 aaKnown RBP15.91■□□□□ 0.14
HDAC6-219ENST00000476625 AOC3Q16853 763 aa15.91■□□□□ 0.14
HDAC6-219ENST00000476625 PROSER3Q2NL68 480 aa15.91■□□□□ 0.14
HDAC6-219ENST00000476625 CST9Q5W186 159 aa15.91■□□□□ 0.14
HDAC6-219ENST00000476625 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
HDAC6-219ENST00000476625 JDP2Q8WYK2 163 aa15.91■□□□□ 0.14
HDAC6-219ENST00000476625 PLEKHF1Q96S99 279 aa15.91■□□□□ 0.14
HDAC6-219ENST00000476625 DDX60Q8IY21 1712 aaKnown RBP15.91■□□□□ 0.14
HDAC6-219ENST00000476625 SHTN1A0MZ66 631 aa15.9■□□□□ 0.14
HDAC6-219ENST00000476625 HTATSF1O43719 755 aaKnown RBP15.9■□□□□ 0.14
HDAC6-219ENST00000476625 AOC2O75106 756 aa15.9■□□□□ 0.14
HDAC6-219ENST00000476625 HOXA10P31260 410 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-219ENST00000476625 ZNF34Q8IZ26 560 aa15.9■□□□□ 0.14
HDAC6-219ENST00000476625 ABHD8Q96I13 439 aa15.9■□□□□ 0.14
HDAC6-219ENST00000476625 NYXQ9GZU5 481 aa15.9■□□□□ 0.14
HDAC6-219ENST00000476625 DUOX1Q9NRD9 1551 aa15.89■□□□□ 0.13
HDAC6-219ENST00000476625 ERVV-1B6SEH8 477 aa15.89■□□□□ 0.13
HDAC6-219ENST00000476625 DLK2Q6UY11 383 aa15.89■□□□□ 0.13
HDAC6-219ENST00000476625 CAPNS2Q96L46 248 aa15.89■□□□□ 0.13
HDAC6-219ENST00000476625 RGL2O15211 777 aa15.88■□□□□ 0.13
HDAC6-219ENST00000476625 PPIP5K2O43314 1243 aa15.88■□□□□ 0.13
HDAC6-219ENST00000476625 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-219ENST00000476625 LRP10Q7Z4F1 713 aa15.88■□□□□ 0.13
HDAC6-219ENST00000476625 NECTIN2Q92692 538 aa15.88■□□□□ 0.13
HDAC6-219ENST00000476625 ABCC4O15439 1325 aa15.88■□□□□ 0.13
HDAC6-219ENST00000476625 IBTKQ9P2D0 1353 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-219ENST00000476625 PDIA6Q15084 440 aa15.87■□□□□ 0.13
HDAC6-219ENST00000476625 NFE2L2Q16236 605 aa15.87■□□□□ 0.13
HDAC6-219ENST00000476625 FAM161AQ3B820 660 aa15.87■□□□□ 0.13
HDAC6-219ENST00000476625 NIM1KQ8IY84 436 aa15.87■□□□□ 0.13
HDAC6-219ENST00000476625 RBM17Q96I25 401 aaKnown RBP15.87■□□□□ 0.13
HDAC6-219ENST00000476625 LRRC37AA6NMS7 1700 aa15.86■□□□□ 0.13
HDAC6-219ENST00000476625 EIF2S2P20042 333 aaKnown RBP15.86■□□□□ 0.13
HDAC6-219ENST00000476625 CXCL9Q07325 125 aa15.86■□□□□ 0.13
HDAC6-219ENST00000476625 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
HDAC6-219ENST00000476625 CRAMP1Q96RY5 1269 aa15.86■□□□□ 0.13
HDAC6-219ENST00000476625 GLIS2Q9BZE0 524 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-219ENST00000476625 CASP8AP2Q9UKL3 1982 aa15.86■□□□□ 0.13
HDAC6-219ENST00000476625 HCLS1P14317 486 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-219ENST00000476625 GMPSP49915 693 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-219ENST00000476625 KRT24Q2M2I5 525 aa15.85■□□□□ 0.13
HDAC6-219ENST00000476625 GPRC5DQ9NZD1 345 aa15.85■□□□□ 0.13
HDAC6-219ENST00000476625 CC2D2BQ6DHV5 1058 aa15.84■□□□□ 0.13
HDAC6-219ENST00000476625 GPR101Q96P66 508 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-219ENST00000476625 ZNF408Q9H9D4 720 aa15.84■□□□□ 0.13
HDAC6-219ENST00000476625 TLL2Q9Y6L7 1015 aa15.84■□□□□ 0.13
HDAC6-219ENST00000476625 RAD17O75943 681 aa15.83■□□□□ 0.12
HDAC6-219ENST00000476625 HIRAP54198 1017 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-219ENST00000476625 MAP2K1Q02750 393 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-219ENST00000476625 AIMP1Q12904 312 aaKnown RBP15.83■□□□□ 0.12
HDAC6-219ENST00000476625 USP50Q70EL3 339 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-219ENST00000476625 TRPM4Q8TD43 1214 aa15.83■□□□□ 0.12
HDAC6-219ENST00000476625 PNISRQ8TF01 805 aaKnown RBP15.83■□□□□ 0.12
HDAC6-219ENST00000476625 ZIC5Q96T25 663 aa15.83■□□□□ 0.12
HDAC6-219ENST00000476625 TSPYL4Q9UJ04 414 aa15.83■□□□□ 0.12
HDAC6-219ENST00000476625 ATP6V0A2Q9Y487 856 aa15.83■□□□□ 0.12
HDAC6-219ENST00000476625 POLR2AP24928 1970 aaKnown RBP15.82■□□□□ 0.12
HDAC6-219ENST00000476625 CCDC85CA6NKD9 419 aa15.82■□□□□ 0.12
HDAC6-219ENST00000476625 YDJCA8MPS7 323 aa15.82■□□□□ 0.12
HDAC6-219ENST00000476625 CELF2O95319 508 aaKnown RBP15.82■□□□□ 0.12
HDAC6-219ENST00000476625 PPP1R42Q7Z4L9 355 aa15.82■□□□□ 0.12
HDAC6-219ENST00000476625 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
HDAC6-219ENST00000476625 UTP14AQ9BVJ6 771 aaKnown RBP15.82■□□□□ 0.12
HDAC6-219ENST00000476625 ADARB2Q9NS39 739 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms